Personal tools

FFCP PHASE1:Mm9::chr5:116474484..116474499,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19079
|EntrezGene=19079
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9R078
|UniProt=Q9R078
|association_with_transcript=-13bp_to_ENSMUST00000031486_5end
|association_with_transcript=-13bp_to_ENSMUST00000031486_5end
|cluster_id=chr5:116474484..116474499,-
|description=CAGE_peak_2_at_Prkab1_5end
|description=CAGE_peak_2_at_Prkab1_5end
|id=chr5:116474484..116474499,-
|id=chr5:116474484..116474499,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004923!9.95e-11!24;UBERON:0004119!2.05e-07!130;UBERON:0000925!2.05e-07!130;UBERON:0006595!2.05e-07!130;UBERON:0001007!6.42e-07!128;UBERON:0001555!6.42e-07!128;UBERON:0007026!6.42e-07!128;UBERON:0000344!7.57e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.39e-11,47;UBERON:0004923,4.81e-11,24;UBERON:0004119,1.08e-10,118;UBERON:0000925,1.08e-10,118;UBERON:0006595,1.08e-10,118;UBERON:0001007,4.47e-10,116;UBERON:0001555,4.47e-10,116;UBERON:0007026,4.47e-10,116;UBERON:0000160,6.57e-10,31;UBERON:0004921,2.26e-09,114;UBERON:0000344,4.96e-07,15;UBERON:0005172,6.35e-07,49;UBERON:0005173,6.35e-07,49;UBERON:0002417,6.35e-07,49;UBERON:0000916,6.35e-07,49
|phase1_expression=1.28119077683835,4.88565570695105,4.54999239389536,3.93203474698879,4.50806156951712,2.18243053485457,2.80335168714631,1.67860320474049,1.12630977721333,2.57470978954193,0.68487187290202,0.717949430958028,1.36960583944965,0.874204024189974,8.32774404539157,7.28910962603373,13.9912375625629,1.57731082679119,0.685572168028694,1.69755860719212,1.10556277196391,1.58865521921416,1.30599894569468,3.67982572424835,2.98232065387321,4.01962374880514,6.03066794622705,3.23206849028834,4.18051522804023,4.28451220591882,3.54768817048488,6.98533740805594,12.3012957516914,0,1.73310971850765,1.82858109894342,2.24586291888606,2.92972141515835,1.5626706890476,0.523523743973798,2.35292595212406,0,2.91306211818692,1.51076181570693,1.21652317463417,1.10128051297009,3.12956537739216,2.39827672018491,3.07560655828261,3.30530828426282,3.21968769738334,1.43752564364972,0.503347818173209,2.17608642603403,2.01656279485478,0.771778308107841,0.85960031981627,0,0.809265843438391,1.5869729378161,2.53532561402472,1.69422266034566,0.889294796111139,5.39939830368839,1.97773272513395,6.3943210345149,0.898800331555214,1.53687322128622,0.622137673850866,0.540023753326763,1.68259969081106,1.42825492201902,1.76694832761291,0.979926393719632,0.958454710182364,1.83843757322004,1.10115880999389,1.14918604276669,0.768032666281217,0.791317726381163,1.9212405156506,0.52091337055676,0.558365998002762,0.56276261003168,0.45839474333043,1.17851434189467,0.711858403995515,1.3047961207771,1.28734528666413,0.755715601067855,1.44932244350839,0,2.03991400112325,1.07940638327563,0.649776417447669,2.24013443548668,1.40444420131752,1.1930122580464,0.779358013808606,1.41335829804136,0.985903938436763,3.84979432242953,0,0,0.649473123033642,0.760079596425296,0.505524445014783,2.05530983494308,1.8125651855302,0.890652834388949,2.25530924795977,1.21786191324856,2.30615497256059,2.56228488939458,1.76383060703557,2.01066546127481,12.1125534189843,1.59059292611903,0.884610551949874,0.808834249737046,2.42925670306433,1.93950101254089,5.59175283654366,1.75668478206928,0.628340120440365,2.55457055208591,0.958520996047362,2.99951365496704,1.65191295194984,0.299581278809645,0.457500602818626,0.879580464790051,0.173824320192276,1.27857728665165,1.0389402227978,0.324482526135515,1.2220723662038,2.11491850037158,2.52722758433675,4.41927897361595,0.390361328888111,0.919608417733892,1.62055916824814,0.90422890701429,1.42876648217788,1.0249097622788,2.71735001223214,4.9153640440413,0,1.32374256117473,0.703804496655795,0.657587197282725,1.11218899690239,0,1.23469281844766,0.398068533636986,1.40442637462647,1.80143534980301,1.70498099637356,2.69263504296152,2.34526059981096,1.08037236876609,1.42046841351126,1.57411385397923,0.617068451549513,0.930135779001631,0.804820204198858,1.63471479314037,1.15191894939436,1.47750717671186,2.10778904819225,0.730999937126662,1.53685080703735,3.22095405024892,0.841159794256509,1.74937841044784,3.30418782983798,1.58670339998127,1.06644125267617,1.85789337488351,1.03093969057675,2.8235693447268,3.33567065767305,3.61428689613862,1.89811624617805,3.29397909448022,2.5133520880027,7.36138946552258,3.50935356814416,1.79763881730844,2.37751854862164,2.98711909881551,2.27601481143698,1.14248512609729,2.25415471346161,1.22190796707189,1.74557238450863,1.19230893813542,2.21327879934901,1.03327103585722,2.04098346193787,1.85095745882701,0.592905254174298,5.00535317148282,4.52085688760367,5.39669069723649,6.8972441272091,5.788251834058,3.8193877767213,3.16465751195892,4.05338066937588,4.3929826110093,0,4.09355042435354,6.24075346229121,2.27320990152401,3.58794827043824,3.37710464954357,1.10851914099963,1.13694847062291,1.79261474086228,1.18821560042632,1.40814148973101,2.01007508930179,2.61848004974615,1.17080188714679,1.7339865851681,1.10732344824387,1.2756381492599,1.3109065177259,0.518054945597687,1.3018415272336,0,1.08781136763742,1.47529281905711,0.827810238914197,1.44495530989013,0.820481806145422,1.80328439914343,0.757412781613119,0.94652465824877,2.34263246577983,1.29254038639679,1.67278158566786,0.668396022247182,0.566153061577665,1.21443210502468,1.16902343164525,0.395287777946524,1.28528526568723,1.56134093729095,1.06839362200353,0.81443479676788,1.81467135269789,0,1.21390318077491,0.604647113929502,0.943025398779491,1.18120757152309,0.614870295887855,1.29214146584111,0.727067458955011,1.06949213515416,0.316036757935816,2.10837217149998,0,0.340439605753788,0.36012218806262,1.16422815404479,0.428674070063185,1.06404140185364,0.356737635204141,0.987294123612726,2.74018454203139,2.3467170806371,3.1774810629573,1.98475558249466,0.49465875882444,1.29171541356724,0.784068024066026,0.596861720015682,0.656563598980245,2.62332752966866,0.556275906031529,4.27177201994632,1.857481811669,3.51869602002452,4.1441060541032,5.19438065339896,3.88922894451088,1.5298058699447,1.81936888020755,0.967399816630967,5.72802370809068,0.790839983952838,1.42323626988794,1.40406943068342,0.627264888043406,1.09181281873089,1.75323650300267,1.65306911450672,3.14107130380836,3.49960427887841,1.86401793926078,0.56369293868419,1.49516546043979,0.496375471371293,0.388902376688095,0.516639293910924,0.337912250981556,1.29092962510329,0.911430693907651,0.734015410979976,0.483168241652012,0.288030006257865,2.8441000856536,1.41907650703115,2.05421914329655,1.03936658382236,1.61124026100733,1.58945083825012,0.961563596159751,0.886137163047463,1.41353029927407,1.98137697303,0.705783295957884,1.65678397257579,0.865906574762965,1.28564592399726,0.453460767230423,2.21985953374065,2.06341870201794,1.17519231454855,2.89784391048286,2.064507229963,3.84618410961257,2.78678892802786,0,0.564751842617067,0,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,1.14166082342594,0.798049746802062,1.70733605754134,0.243106717068294,1.88651846365184,1.83843508450014,2.44471400581777,2.06035057238894,2.24643446714271,2.02157769411038,2.28131369901216,2.64076877940507,1.31098110457835,0.832326981263301,1.20614484806788,1.42888107384922,1.85414921511769,0.77163688185482,0.824171801606613,1.47198920134397,1.71434626192708,0.177475806159338,1.43061713968393,1.45346416632329,1.2234219453993,1.35383372626682,1.46342378298218,1.57841826862706,0.950628796921032,1.68342681497322,1.42362021749009,1.28055827088233,0,1.23949472948773,0.771626443924566,1.49886346762768,0.935726433781634,1.07435527024149,1.53030665655075,0.441182838239031,1.15933917810211
|phase1_expression=1.28119077683835,4.88565570695105,4.54999239389536,3.93203474698879,4.50806156951712,2.18243053485457,2.80335168714631,1.67860320474049,1.12630977721333,2.57470978954193,0.68487187290202,0.717949430958028,1.36960583944965,0.874204024189974,8.32774404539157,7.28910962603373,13.9912375625629,1.57731082679119,0.685572168028694,1.69755860719212,1.10556277196391,1.58865521921416,1.30599894569468,3.67982572424835,2.98232065387321,4.01962374880514,6.03066794622705,3.23206849028834,4.18051522804023,4.28451220591882,3.54768817048488,6.98533740805594,12.3012957516914,0,1.73310971850765,1.82858109894342,2.24586291888606,2.92972141515835,1.5626706890476,0.523523743973798,2.35292595212406,0,2.91306211818692,1.51076181570693,1.21652317463417,1.10128051297009,3.12956537739216,2.39827672018491,3.07560655828261,3.30530828426282,3.21968769738334,1.43752564364972,0.503347818173209,2.17608642603403,2.01656279485478,0.771778308107841,0.85960031981627,0,0.809265843438391,1.5869729378161,2.53532561402472,1.69422266034566,0.889294796111139,5.39939830368839,1.97773272513395,6.3943210345149,0.898800331555214,1.53687322128622,0.622137673850866,0.540023753326763,1.68259969081106,1.42825492201902,1.76694832761291,0.979926393719632,0.958454710182364,1.83843757322004,1.10115880999389,1.14918604276669,0.768032666281217,0.791317726381163,1.9212405156506,0.52091337055676,0.558365998002762,0.56276261003168,0.45839474333043,1.17851434189467,0.711858403995515,1.3047961207771,1.28734528666413,0.755715601067855,1.44932244350839,0,2.03991400112325,1.07940638327563,0.649776417447669,2.24013443548668,1.40444420131752,1.1930122580464,0.779358013808606,1.41335829804136,0.985903938436763,3.84979432242953,0,0,0.649473123033642,0.760079596425296,0.505524445014783,2.05530983494308,1.8125651855302,0.890652834388949,2.25530924795977,1.21786191324856,2.30615497256059,2.56228488939458,1.76383060703557,2.01066546127481,12.1125534189843,1.59059292611903,0.884610551949874,0.808834249737046,2.42925670306433,1.93950101254089,5.59175283654366,1.75668478206928,0.628340120440365,2.55457055208591,0.958520996047362,2.99951365496704,1.65191295194984,0.299581278809645,0.457500602818626,0.879580464790051,0.173824320192276,1.27857728665165,1.0389402227978,0.324482526135515,1.2220723662038,2.11491850037158,2.52722758433675,4.41927897361595,0.390361328888111,0.919608417733892,1.62055916824814,0.90422890701429,1.42876648217788,1.0249097622788,2.71735001223214,4.9153640440413,0,1.32374256117473,0.703804496655795,0.657587197282725,1.11218899690239,0,1.23469281844766,0.398068533636986,1.40442637462647,1.80143534980301,1.70498099637356,2.69263504296152,2.34526059981096,1.08037236876609,1.42046841351126,1.57411385397923,0.617068451549513,0.930135779001631,0.804820204198858,1.63471479314037,1.15191894939436,1.47750717671186,2.10778904819225,0.730999937126662,1.53685080703735,3.22095405024892,0.841159794256509,1.74937841044784,3.30418782983798,1.58670339998127,1.06644125267617,1.85789337488351,1.03093969057675,2.8235693447268,3.33567065767305,3.61428689613862,1.89811624617805,3.29397909448022,2.5133520880027,7.36138946552258,3.50935356814416,1.79763881730844,2.37751854862164,2.98711909881551,2.27601481143698,1.14248512609729,2.25415471346161,1.22190796707189,1.74557238450863,1.19230893813542,2.21327879934901,1.03327103585722,2.04098346193787,1.85095745882701,0.592905254174298,5.00535317148282,4.52085688760367,5.39669069723649,6.8972441272091,5.788251834058,3.8193877767213,3.16465751195892,4.05338066937588,4.3929826110093,0,4.09355042435354,6.24075346229121,2.27320990152401,3.58794827043824,3.37710464954357,1.10851914099963,1.13694847062291,1.79261474086228,1.18821560042632,1.40814148973101,2.01007508930179,2.61848004974615,1.17080188714679,1.7339865851681,1.10732344824387,1.2756381492599,1.3109065177259,0.518054945597687,1.3018415272336,0,1.08781136763742,1.47529281905711,0.827810238914197,1.44495530989013,0.820481806145422,1.80328439914343,0.757412781613119,0.94652465824877,2.34263246577983,1.29254038639679,1.67278158566786,0.668396022247182,0.566153061577665,1.21443210502468,1.16902343164525,0.395287777946524,1.28528526568723,1.56134093729095,1.06839362200353,0.81443479676788,1.81467135269789,0,1.21390318077491,0.604647113929502,0.943025398779491,1.18120757152309,0.614870295887855,1.29214146584111,0.727067458955011,1.06949213515416,0.316036757935816,2.10837217149998,0,0.340439605753788,0.36012218806262,1.16422815404479,0.428674070063185,1.06404140185364,0.356737635204141,0.987294123612726,2.74018454203139,2.3467170806371,3.1774810629573,1.98475558249466,0.49465875882444,1.29171541356724,0.784068024066026,0.596861720015682,0.656563598980245,2.62332752966866,0.556275906031529,4.27177201994632,1.857481811669,3.51869602002452,4.1441060541032,5.19438065339896,3.88922894451088,1.5298058699447,1.81936888020755,0.967399816630967,5.72802370809068,0.790839983952838,1.42323626988794,1.40406943068342,0.627264888043406,1.09181281873089,1.75323650300267,1.65306911450672,3.14107130380836,3.49960427887841,1.86401793926078,0.56369293868419,1.49516546043979,0.496375471371293,0.388902376688095,0.516639293910924,0.337912250981556,1.29092962510329,0.911430693907651,0.734015410979976,0.483168241652012,0.288030006257865,2.8441000856536,1.41907650703115,2.05421914329655,1.03936658382236,1.61124026100733,1.58945083825012,0.961563596159751,0.886137163047463,1.41353029927407,1.98137697303,0.705783295957884,1.65678397257579,0.865906574762965,1.28564592399726,0.453460767230423,2.21985953374065,2.06341870201794,1.17519231454855,2.89784391048286,2.064507229963,3.84618410961257,2.78678892802786,0,0.564751842617067,0,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,1.14166082342594,0.798049746802062,1.70733605754134,0.243106717068294,1.88651846365184,1.83843508450014,2.44471400581777,2.06035057238894,2.24643446714271,2.02157769411038,2.28131369901216,2.64076877940507,1.31098110457835,0.832326981263301,1.20614484806788,1.42888107384922,1.85414921511769,0.77163688185482,0.824171801606613,1.47198920134397,1.71434626192708,0.177475806159338,1.43061713968393,1.45346416632329,1.2234219453993,1.35383372626682,1.46342378298218,1.57841826862706,0.950628796921032,1.68342681497322,1.42362021749009,1.28055827088233,0,1.23949472948773,0.771626443924566,1.49886346762768,0.935726433781634,1.07435527024149,1.53030665655075,0.441182838239031,1.15933917810211
|short_description=p2@Prkab1
|short_description=p2@Prkab1
}}
}}

Latest revision as of 17:54, 1 October 2015

Short description:p2@Prkab1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Prkab1_5end
Coexpression cluster:NA
Association with transcript: -13bp_to_ENSMUST00000031486_5end
EntrezGene:Prkab1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Prkab1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.29
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A812.11
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G12.11
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F85.01
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I13.50
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system1.39e-1147
organ component layer4.81e-1124
endoderm-derived structure1.08e-10118
endoderm1.08e-10118
presumptive endoderm1.08e-10118
digestive system4.47e-10116
digestive tract4.47e-10116
primitive gut4.47e-10116
intestine6.57e-1031
subdivision of digestive tract2.26e-09114
mucosa4.96e-0715
abdomen element6.35e-0749
abdominal segment element6.35e-0749
abdominal segment of trunk6.35e-0749
abdomen6.35e-0749
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:116474484..116474499,-&oldid=4315016"