FFCP PHASE1:Mm9::chr12:110783600..110783653,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17263 | |EntrezGene=17263 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=220 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000146701,NR_003633,uc007pau.2_5end | |association_with_transcript=0bp_to_ENSMUST00000146701,NR_003633,uc007pau.2_5end | ||
|cluster_id=chr12:110783600..110783653,+ | |||
|description=CAGE_peak_1_at_Meg3_5end | |description=CAGE_peak_1_at_Meg3_5end | ||
|id=chr12:110783600..110783653,+ | |id=chr12:110783600..110783653,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.69e-12!333;UBERON:0002346!3.92e-09!71;UBERON:0003075!3.92e-09!71;UBERON:0007284!3.92e-09!71;UBERON:0001049!4.27e-08!52;UBERON:0005068!4.27e-08!52;UBERON:0006241!4.27e-08!52;UBERON:0007135!4.27e-08!52;UBERON:0003056!4.65e-08!49;UBERON:0000922!8.14e-08!328;UBERON:0000955!9.47e-08!50;UBERON:0006238!9.47e-08!50;UBERON:0003080!1.27e-07!40;UBERON:0002616!1.76e-07!49;UBERON:0002780!3.15e-07!39;UBERON:0001890!3.15e-07!39;UBERON:0006240!3.15e-07!39;UBERON:0000033!3.57e-07!63 | |ontology_enrichment_uberon=UBERON:0000468!3.69e-12!333;UBERON:0002346!3.92e-09!71;UBERON:0003075!3.92e-09!71;UBERON:0007284!3.92e-09!71;UBERON:0001049!4.27e-08!52;UBERON:0005068!4.27e-08!52;UBERON:0006241!4.27e-08!52;UBERON:0007135!4.27e-08!52;UBERON:0003056!4.65e-08!49;UBERON:0000922!8.14e-08!328;UBERON:0000955!9.47e-08!50;UBERON:0006238!9.47e-08!50;UBERON:0003080!1.27e-07!40;UBERON:0002616!1.76e-07!49;UBERON:0002780!3.15e-07!39;UBERON:0001890!3.15e-07!39;UBERON:0006240!3.15e-07!39;UBERON:0000033!3.57e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.02e-08,54;UBERON:0010314,2.43e-08,92;UBERON:0001049,3.41e-08,52;UBERON:0005068,3.41e-08,52;UBERON:0006241,3.41e-08,52;UBERON:0007135,3.41e-08,52;UBERON:0002346,3.92e-08,64;UBERON:0003075,3.92e-08,64;UBERON:0007284,3.92e-08,64;UBERON:0003056,4.18e-08,49;UBERON:0003080,1.17e-07,40;UBERON:0000955,1.89e-07,47;UBERON:0006238,1.89e-07,47;UBERON:0002780,2.94e-07,39;UBERON:0001890,2.94e-07,39;UBERON:0006240,2.94e-07,39;UBERON:0002616,3.52e-07,46;UBERON:0010371,4.52e-07,73;UBERON:0002021,8.53e-07,10;UBERON:0000411,8.53e-07,10;UBERON:0001950,8.53e-07,10 | |||
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| ||
|short_description=p1@Meg3 | |short_description=p1@Meg3 | ||
}} | }} |
Latest revision as of 07:26, 26 September 2015
Short description: | p1@Meg3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Meg3_5end |
Coexpression cluster: | MCL_coexpression_mm9:220 |
Association with transcript: | 0bp_to_ENSMUST00000146701, NR_003633, uc007pau.2_5end |
EntrezGene: | Meg3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.02e-08 | 54 |
structure with developmental contribution from neural crest | 2.43e-08 | 92 |
neural tube | 3.41e-08 | 52 |
neural rod | 3.41e-08 | 52 |
future spinal cord | 3.41e-08 | 52 |
neural keel | 3.41e-08 | 52 |
neurectoderm | 3.92e-08 | 64 |
neural plate | 3.92e-08 | 64 |
presumptive neural plate | 3.92e-08 | 64 |
pre-chordal neural plate | 4.18e-08 | 49 |
anterior neural tube | 1.17e-07 | 40 |
brain | 1.89e-07 | 47 |
future brain | 1.89e-07 | 47 |
regional part of forebrain | 2.94e-07 | 39 |
forebrain | 2.94e-07 | 39 |
future forebrain | 2.94e-07 | 39 |
regional part of brain | 3.52e-07 | 46 |
ecto-epithelium | 4.52e-07 | 73 |
occipital lobe | 8.53e-07 | 10 |
visual cortex | 8.53e-07 | 10 |
neocortex | 8.53e-07 | 10 |