FFCP PHASE1:Mm9::chr5:138182829..138182845,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243300 | |EntrezGene=243300 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PFX7,Q3URQ9 | |UniProt=Q6PFX7,Q3URQ9 | ||
|association_with_transcript=0bp_to_ENSMUST00000061789,ENSMUST00000119498,uc009adr.1,uc009ads.1_5end | |association_with_transcript=0bp_to_ENSMUST00000061789,ENSMUST00000119498,uc009adr.1,uc009ads.1_5end | ||
|cluster_id=chr5:138182829..138182845,- | |||
|description=CAGE_peak_2_at_6430598A04Rik_5end | |description=CAGE_peak_2_at_6430598A04Rik_5end | ||
|id=chr5:138182829..138182845,- | |id=chr5:138182829..138182845,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.52e-09,6;CL:0000677,4.52e-09,6;CL:0000584,4.52e-09,6;CL:0000075,1.35e-07,7;CL:0002563,2.05e-07,9;CL:0002251,2.05e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.87e-09!15;UBERON:0000160!1.12e-08!43;UBERON:0005409!4.25e-08!59;UBERON:0001242!4.57e-08!13;UBERON:0000060!4.57e-08!13;UBERON:0001262!4.57e-08!13;UBERON:0004786!4.57e-08!13;UBERON:0000064!4.01e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.93e-25,31;UBERON:0005409,1.54e-16,47;UBERON:0000344,8.37e-14,15;UBERON:0011216,4.58e-13,194;UBERON:0001242,5.18e-12,13;UBERON:0001262,5.18e-12,13;UBERON:0004786,5.18e-12,13;UBERON:0000073,3.88e-09,54;UBERON:0004923,2.15e-08,24;UBERON:0001049,7.29e-08,52;UBERON:0005068,7.29e-08,52;UBERON:0006241,7.29e-08,52;UBERON:0007135,7.29e-08,52;UBERON:0003350,2.05e-07,9;UBERON:0004808,2.05e-07,9;UBERON:0001277,2.05e-07,9;UBERON:0001017,3.91e-07,73;UBERON:0001016,9.46e-07,75 | |||
|phase1_expression=0,13.2610654902957,15.0149748998547,30.8513495532967,27.0483694171027,2.85394762250213,1.86890112476421,0.387369970324729,0.281577444303333,0.70219357896598,0,0.0797721589953364,0.513602189793617,0.699363219351979,0,0.404950534779652,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0,0.261199789138935,1.59992422793407,2.2940928106717,8.6134794617253,3.01533397311352,3.878482188346,4.56056206695297,4.03248207615889,2.21730510655305,0,0.61506478758457,0,0.866554859253824,0.498703936075477,2.24586291888606,0,0.7813353445238,0,0,0,0.485510353031154,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0.672187598284928,0,0,0,2.22548106945558,0,3.1691570175309,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.135005938331691,0,4.28476476605705,1.54607978666129,0.367472397644862,0.575072826109418,0,4.40463523997555,1.65993539510744,2.91852413186863,0.791317726381163,1.18933936683133,0.52091337055676,2.23346399201105,3.37657566019008,2.29197371665215,1.76777151284201,1.99320353118744,0.559198337475902,0.151452386666368,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0,1.73036477414062,0,0,0,0,0.484875253135222,5.59175283654366,0.878342391034642,0.83778682725382,4.34276993854605,0,0,0,2.84602214869163,3.20250421973039,1.13088916901578,1.56441888173049,0.767146371990992,2.49345653471472,1.1356888414743,0.101839363850316,0.248813941220186,0.252722758433675,0.420883711772948,0,0,0.360124259610698,0.150704817835715,0.340182495756639,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0.219195732427575,0.834141747676794,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,0,0.720248245844059,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.486412857275134,0.146199987425332,0.658650345873152,0.402619256281115,0.420579897128254,0.514523061896422,16.5209391491899,6.08236303326152,0,0,0.38660238396628,1.00841762311671,1.33426826306922,2.09248188723815,5.21981967698963,3.12928013975621,3.51869292320377,1.39269530428806,3.31438948102504,8.98819408654222,4.10662294761919,5.37681437786791,0.379335801906163,0.114248512609729,0,0.407302655690628,0.387904974335251,0.350679099451593,0.505892296994058,0.885660887877613,0.470996183524124,0.987177311374404,0,0.333690211432188,0.393117990226406,0.899448449539415,1.01430060694251,0.482354319504834,0.25462585178142,0,0.324270453550071,1.09824565275233,2.87536413054709,1.48856379067401,0.624075346229121,0.505157755894224,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0,0,2.56880943980467,2.81308047821288,0.163934945376675,0,0,0,0,0,0.445597348164788,0.283076530788832,0,0,0,0.642642632843614,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0.307435147943927,1.03371317267288,0.727067458955011,0,0,0,0,1.70219802876894,0.18006109403131,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,0.822745103010605,1.8267896946876,0,0.21183207086382,0.661585194164886,0.8244312647074,0.807322133479528,0.301564624640779,0.477489376012546,0.328281799490123,4.95517422270746,3.52308073819968,0.683483523191411,0,0.185194527369712,0.188368457004691,0.546776910884101,0.457556346413045,0.509935289981566,0.279902904647316,0.829199842826543,0,0.158167996790568,0.203319467126849,0.86404272657441,1.25452977608681,0.87345025498471,0.404593039154462,0.743881101528023,0.26175594198403,3.75883422546199,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0.2604087696879,0.838874755405687,0.241584120826006,0,0.632022241256357,0,0,0.389762468933385,0.716106782669926,0.39736270956253,0.841368146639782,1.03382669022204,0.807731599585181,0.914481679859998,0.907435666231565,0.487289403698762,1.05833025804362,1.75315353272353,0,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0,1.00314420807073,0.564751842617067,1.38097570952153,0.572895513439397,1.03111909406213,0,2.2661816921691,0,1.35096360967266,1.81256963593682,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.919217542250071,0.666740183404846,0.824140228955577,0.320919209591815,0.505394423527595,0.760437899670719,0.377252682772152,0.468207537349412,0.640251524048693,0.918967503289812,0,0.695305955669133,0.964546102318525,0.412085900803307,0.588795680537589,1.37147700954166,0.532427418478012,0,0,0.941093804153306,0.423073039458382,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.964533054905707,0.999242311751784,0.701794825336225,0.429742108096597,0,0,0.463735671240843 | |phase1_expression=0,13.2610654902957,15.0149748998547,30.8513495532967,27.0483694171027,2.85394762250213,1.86890112476421,0.387369970324729,0.281577444303333,0.70219357896598,0,0.0797721589953364,0.513602189793617,0.699363219351979,0,0.404950534779652,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0,0.261199789138935,1.59992422793407,2.2940928106717,8.6134794617253,3.01533397311352,3.878482188346,4.56056206695297,4.03248207615889,2.21730510655305,0,0.61506478758457,0,0.866554859253824,0.498703936075477,2.24586291888606,0,0.7813353445238,0,0,0,0.485510353031154,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0.672187598284928,0,0,0,2.22548106945558,0,3.1691570175309,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.135005938331691,0,4.28476476605705,1.54607978666129,0.367472397644862,0.575072826109418,0,4.40463523997555,1.65993539510744,2.91852413186863,0.791317726381163,1.18933936683133,0.52091337055676,2.23346399201105,3.37657566019008,2.29197371665215,1.76777151284201,1.99320353118744,0.559198337475902,0.151452386666368,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0,1.73036477414062,0,0,0,0,0.484875253135222,5.59175283654366,0.878342391034642,0.83778682725382,4.34276993854605,0,0,0,2.84602214869163,3.20250421973039,1.13088916901578,1.56441888173049,0.767146371990992,2.49345653471472,1.1356888414743,0.101839363850316,0.248813941220186,0.252722758433675,0.420883711772948,0,0,0.360124259610698,0.150704817835715,0.340182495756639,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0.219195732427575,0.834141747676794,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,0,0.720248245844059,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.486412857275134,0.146199987425332,0.658650345873152,0.402619256281115,0.420579897128254,0.514523061896422,16.5209391491899,6.08236303326152,0,0,0.38660238396628,1.00841762311671,1.33426826306922,2.09248188723815,5.21981967698963,3.12928013975621,3.51869292320377,1.39269530428806,3.31438948102504,8.98819408654222,4.10662294761919,5.37681437786791,0.379335801906163,0.114248512609729,0,0.407302655690628,0.387904974335251,0.350679099451593,0.505892296994058,0.885660887877613,0.470996183524124,0.987177311374404,0,0.333690211432188,0.393117990226406,0.899448449539415,1.01430060694251,0.482354319504834,0.25462585178142,0,0.324270453550071,1.09824565275233,2.87536413054709,1.48856379067401,0.624075346229121,0.505157755894224,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0,0,2.56880943980467,2.81308047821288,0.163934945376675,0,0,0,0,0,0.445597348164788,0.283076530788832,0,0,0,0.642642632843614,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0.307435147943927,1.03371317267288,0.727067458955011,0,0,0,0,1.70219802876894,0.18006109403131,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,0.822745103010605,1.8267896946876,0,0.21183207086382,0.661585194164886,0.8244312647074,0.807322133479528,0.301564624640779,0.477489376012546,0.328281799490123,4.95517422270746,3.52308073819968,0.683483523191411,0,0.185194527369712,0.188368457004691,0.546776910884101,0.457556346413045,0.509935289981566,0.279902904647316,0.829199842826543,0,0.158167996790568,0.203319467126849,0.86404272657441,1.25452977608681,0.87345025498471,0.404593039154462,0.743881101528023,0.26175594198403,3.75883422546199,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0.2604087696879,0.838874755405687,0.241584120826006,0,0.632022241256357,0,0,0.389762468933385,0.716106782669926,0.39736270956253,0.841368146639782,1.03382669022204,0.807731599585181,0.914481679859998,0.907435666231565,0.487289403698762,1.05833025804362,1.75315353272353,0,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0,1.00314420807073,0.564751842617067,1.38097570952153,0.572895513439397,1.03111909406213,0,2.2661816921691,0,1.35096360967266,1.81256963593682,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.919217542250071,0.666740183404846,0.824140228955577,0.320919209591815,0.505394423527595,0.760437899670719,0.377252682772152,0.468207537349412,0.640251524048693,0.918967503289812,0,0.695305955669133,0.964546102318525,0.412085900803307,0.588795680537589,1.37147700954166,0.532427418478012,0,0,0.941093804153306,0.423073039458382,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.964533054905707,0.999242311751784,0.701794825336225,0.429742108096597,0,0,0.463735671240843 | ||
|short_description=p2@6430598A04Rik | |short_description=p2@6430598A04Rik | ||
}} | }} |
Latest revision as of 14:59, 25 September 2015
Short description: | p2@6430598A04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_6430598A04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000061789, ENSMUST00000119498, uc009adr.1, uc009ads.1_5end |
EntrezGene: | 6430598A04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.52e-09 | 6 |
gut absorptive cell | 4.52e-09 | 6 |
enterocyte | 4.52e-09 | 6 |
columnar/cuboidal epithelial cell | 1.35e-07 | 7 |
intestinal epithelial cell | 2.05e-07 | 9 |
epithelial cell of alimentary canal | 2.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.93e-25 | 31 |
gastrointestinal system | 1.54e-16 | 47 |
mucosa | 8.37e-14 | 15 |
organ system subdivision | 4.58e-13 | 194 |
intestinal mucosa | 5.18e-12 | 13 |
wall of intestine | 5.18e-12 | 13 |
gastrointestinal system mucosa | 5.18e-12 | 13 |
regional part of nervous system | 3.88e-09 | 54 |
organ component layer | 2.15e-08 | 24 |
neural tube | 7.29e-08 | 52 |
neural rod | 7.29e-08 | 52 |
future spinal cord | 7.29e-08 | 52 |
neural keel | 7.29e-08 | 52 |
epithelium of mucosa | 2.05e-07 | 9 |
gastrointestinal system epithelium | 2.05e-07 | 9 |
intestinal epithelium | 2.05e-07 | 9 |
central nervous system | 3.91e-07 | 73 |
nervous system | 9.46e-07 | 75 |