FFCP PHASE1:Mm9::chr14:26588296..26588351,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71918 | |EntrezGene=71918 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=283 | |||
|TSSclassifier=NA | |||
|UniProt=B2RVL6 | |UniProt=B2RVL6 | ||
|association_with_transcript=0bp_to_ENSMUST00000069180,NM_001101433,uc011zho.1_5end | |association_with_transcript=0bp_to_ENSMUST00000069180,NM_001101433,uc011zho.1_5end | ||
|cluster_id=chr14:26588296..26588351,- | |||
|description=CAGE_peak_2_at_Zcchc24_5end | |description=CAGE_peak_2_at_Zcchc24_5end | ||
|id=chr14:26588296..26588351,- | |id=chr14:26588296..26588351,- | ||
|ontology_enrichment_celltype=CL:0000055!2.38e-12!50;CL:0000221!4.46e-10!44;CL:0000133!4.46e-10!44;CL:0002319!6.00e-10!43;CL:0000333!2.00e-07!10;CL:0000095!2.00e-07!10;CL:0000243!2.00e-07!10;CL:0000123!2.00e-07!10;CL:0000125!2.00e-07!10;CL:0000030!2.00e-07!10;CL:0000339!2.00e-07!10;CL:0000393!4.70e-07!39;CL:0000211!4.70e-07!39;CL:0002321!6.68e-07!70;CL:0000220!6.68e-07!70 | |ontology_enrichment_celltype=CL:0000055!2.38e-12!50;CL:0000221!4.46e-10!44;CL:0000133!4.46e-10!44;CL:0002319!6.00e-10!43;CL:0000333!2.00e-07!10;CL:0000095!2.00e-07!10;CL:0000243!2.00e-07!10;CL:0000123!2.00e-07!10;CL:0000125!2.00e-07!10;CL:0000030!2.00e-07!10;CL:0000339!2.00e-07!10;CL:0000393!4.70e-07!39;CL:0000211!4.70e-07!39;CL:0002321!6.68e-07!70;CL:0000220!6.68e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.22e-10,44;CL:0000133,6.22e-10,44;CL:0002319,8.43e-10,43;CL:0000333,1.57e-07,10;CL:0000095,1.57e-07,10;CL:0000243,1.57e-07,10;CL:0000123,1.57e-07,10;CL:0000125,1.57e-07,10;CL:0000030,1.57e-07,10;CL:0000339,1.57e-07,10;CL:0002321,1.95e-07,70;CL:0000393,6.71e-07,39;CL:0000211,6.71e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.05e-21!75;UBERON:0001016!3.05e-21!75;UBERON:0001017!3.15e-20!73;UBERON:0005743!3.15e-20!73;UBERON:0000025!3.33e-14!114;UBERON:0004121!4.73e-14!102;UBERON:0000924!4.73e-14!102;UBERON:0006601!4.73e-14!102;UBERON:0004111!3.99e-13!122;UBERON:0001049!4.01e-13!52;UBERON:0005068!4.01e-13!52;UBERON:0006241!4.01e-13!52;UBERON:0007135!4.01e-13!52;UBERON:0000955!1.69e-12!50;UBERON:0006238!1.69e-12!50;UBERON:0002616!4.76e-12!49;UBERON:0002346!3.09e-09!71;UBERON:0003075!3.09e-09!71;UBERON:0007284!3.09e-09!71;UBERON:0000033!3.13e-09!63;UBERON:0002020!1.39e-08!34;UBERON:0003076!8.27e-08!12;UBERON:0003057!8.27e-08!12;UBERON:0003080!2.30e-07!40;UBERON:0002780!7.08e-07!39;UBERON:0001890!7.08e-07!39;UBERON:0006240!7.08e-07!39 | |ontology_enrichment_uberon=UBERON:0000073!3.05e-21!75;UBERON:0001016!3.05e-21!75;UBERON:0001017!3.15e-20!73;UBERON:0005743!3.15e-20!73;UBERON:0000025!3.33e-14!114;UBERON:0004121!4.73e-14!102;UBERON:0000924!4.73e-14!102;UBERON:0006601!4.73e-14!102;UBERON:0004111!3.99e-13!122;UBERON:0001049!4.01e-13!52;UBERON:0005068!4.01e-13!52;UBERON:0006241!4.01e-13!52;UBERON:0007135!4.01e-13!52;UBERON:0000955!1.69e-12!50;UBERON:0006238!1.69e-12!50;UBERON:0002616!4.76e-12!49;UBERON:0002346!3.09e-09!71;UBERON:0003075!3.09e-09!71;UBERON:0007284!3.09e-09!71;UBERON:0000033!3.13e-09!63;UBERON:0002020!1.39e-08!34;UBERON:0003076!8.27e-08!12;UBERON:0003057!8.27e-08!12;UBERON:0003080!2.30e-07!40;UBERON:0002780!7.08e-07!39;UBERON:0001890!7.08e-07!39;UBERON:0006240!7.08e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.11e-21,75;UBERON:0001017,3.30e-20,73;UBERON:0004121,2.12e-16,95;UBERON:0000924,2.12e-16,95;UBERON:0006601,2.12e-16,95;UBERON:0000073,3.92e-14,54;UBERON:0000025,1.90e-13,114;UBERON:0001049,5.22e-13,52;UBERON:0005068,5.22e-13,52;UBERON:0006241,5.22e-13,52;UBERON:0007135,5.22e-13,52;UBERON:0004111,2.39e-12,122;UBERON:0002346,1.98e-11,64;UBERON:0003075,1.98e-11,64;UBERON:0007284,1.98e-11,64;UBERON:0000955,1.06e-10,47;UBERON:0006238,1.06e-10,47;UBERON:0010371,1.55e-10,73;UBERON:0002616,2.91e-10,46;UBERON:0010314,1.50e-08,92;UBERON:0002020,2.08e-08,34;UBERON:0003076,6.37e-08,12;UBERON:0003057,6.37e-08,12;UBERON:0003080,3.27e-07,40 | |||
|phase1_expression=1.92178616525753,0.348975407639361,0,0,0,0,0,0.258246646883153,0,0,0,0,0.342401459862411,0,0,0.404950534779652,0,0.630924330716475,1.23402990245165,0,4.93251082876205,0.496454756004426,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0.683045484958446,0,16.6183799727762,14.5982780956101,11.7469921383476,33.6428278069657,36.1921759591541,65.2467962721381,59.4955491167307,26.4574336871935,27.3129872293446,0,0,0,5.40244815675489,8.02293631828519,4.64104883049698,1.21389876515759,3.70293685490423,2.53532561402472,36.5952094634663,25.789549087223,2.6996991518442,4.94433181283487,4.2628806896766,31.7576117149509,39.1902671427986,1.45165457231869,0.675029691658453,1.89292465216244,25.1372866275347,21.2033799313549,1.10241719293459,0.958454710182364,1.83843757322004,39.6417171597799,24.2605942361857,29.646060918455,1.45074916503213,1.55528994124096,3.12548022334056,35.4562408731754,19.6966913511088,22.3085441754143,17.6777151284201,12.2439645487229,3.91438836233131,7.19398836665249,18.9684615868032,2.6087803983151,4.30211938490693,4.75979933595425,7.55584468292944,7.79731700937203,10.3046184032387,5.19644354487482,11.2484012901518,6.49465011507172,11.3068663843309,3.94361575374705,7.69958864485907,10.1922095882658,7.11066703153331,0,0,0.505524445014783,5.48082622651488,1.55362730188303,0.742210695324124,1.73485326766136,0.608930956624282,2.07553947530453,1.05505848386836,1.64624189989987,0.879666139307728,2.47194967734374,5.06097749219691,0.884610551949874,7.27950824763341,2.42925670306433,3.87900202508178,0,16.3957246326466,15.2896095973822,0.255457055208591,0.11981512450592,0,0.127070227073065,34.601637702514,32.9400434029411,4.77486538028885,15.9918374576894,13.5529192385075,33.6616632186487,25.3096370385702,2.13862664085664,2.23932547098167,0.758168275301024,1.89397670297827,0.260240885925407,0.459804208866946,1.0803727788321,1.9591626318643,1.49680298132921,2.43416068541215,2.99845518591132,4.65666067330228,1.07783996466421,3.02569728268511,4.39877810409872,1.7535658594206,3.05851974148158,4.87553033131033,3.70407845534298,2.58744546864041,0,0,0,2.48550927042602,1.64168241986767,1.08037236876609,1.89395788468168,3.54175617145327,2.31400669331067,2.32533944750408,2.68273401399619,2.21854150497622,3.45575684818309,2.13417703302824,2.99954595319666,2.19299981137998,2.41505126820156,1.8788898626452,18.9260953707715,6.68879980465349,0,0.793351699990633,0.639864751605702,1.62565670302307,2.06187938115349,2.8235693447268,2.44615848229357,1.52180500890047,0,1.15289268306808,2.01068167040216,1.59165177632921,0.974820435595601,0,0.648414149624083,2.19055400579804,0.948339504765408,1.37098215131675,1.1270773567308,1.4255592949172,1.35766741017338,0.911765658574141,1.01178459398812,0.295220295959204,0.31399745568275,0.370191491765402,5.63259991465583,0.83422552858047,0.589676985339609,1.57403478669398,0.811440485554012,1.92941727801933,2.5462585178142,2.30156909960649,3.89124544260085,4.94210543738547,11.5014565221884,7.07067800570156,10.2972432127805,7.32478746046624,6.27890947326693,11.5786445127208,2.03228509183265,0.947457058852424,1.62964976442026,1.52770577197669,1.87752198630802,1.50755631697634,0.952174563544055,2.53673742215138,3.15270288212382,3.10050565508285,2.87018583583477,2.62181303545181,2.41758974612254,2.74833211304872,1.50791283939272,1.08781136763742,0,1.93155722413313,50.5734358461545,40.7896669340867,6.88526770582037,3.53459298086122,5.67914794949262,5.85658116444958,7.10897212518236,5.73525115086125,10.2487390077901,9.05844898524264,5.66734982344852,4.9683495844923,5.92931666919785,11.8888887076069,2.98074178937364,2.84904965867608,4.72372182125371,4.45419332025846,1.32745138339963,1.69946445308487,1.209294227859,1.32023555829129,1.18120757152309,1.84461088766356,1.55056975900933,1.81766864738753,2.13898427030833,1.8962205476149,2.10837217149998,1.03135543248187,1.36175842301515,2.16073312837572,2.06973894052407,1.50035924522115,2.6601035046341,3.74574516964348,2.96188237083818,5.48036908406279,3.28540391289194,1.27099242518292,1.54369878638473,2.80306630000516,4.52100394748536,2.71408162176701,2.26807453605959,1.80554989719567,1.45740418314925,50.2502568448481,0.512612642393558,3.09580301944834,2.03713980106683,0.376736914009382,0.820165366326151,0.915112692826091,0.339956859987711,0.69975726161829,0.414599921413271,0.954670618015114,1.10717597753397,3.25311147402958,3.13215488383224,2.71814784818809,2.62035076495413,3.77620169877498,3.38879168473877,2.09404753587224,0.90730481304255,0.621339313086926,0,1.49516546043979,1.65458490457098,1.94451188344048,1.93739735216597,1.18269287843545,2.93393096614385,1.5624526181274,0.734015410979976,0.724752362478018,0.864090018773596,1.89606672376907,1.01362607645082,1.1298205288131,1.16928740680016,1.07416017400489,0.596044064343795,0.360586348559907,0.443068581523732,0.706765149637033,1.06689529317,0.705783295957884,0.682205165178267,0.865906574762965,1.28564592399726,1.36038230169127,0,0.08971385660947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| ||
|short_description=p2@Zcchc24 | |short_description=p2@Zcchc24 | ||
}} | }} |
Latest revision as of 19:53, 25 September 2015
Short description: | p2@Zcchc24 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zcchc24_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | 0bp_to_ENSMUST00000069180, NM_001101433, uc011zho.1_5end |
EntrezGene: | Zcchc24 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.22e-10 | 44 |
neurectodermal cell | 6.22e-10 | 44 |
neural cell | 8.43e-10 | 43 |
migratory neural crest cell | 1.57e-07 | 10 |
neuron associated cell | 1.57e-07 | 10 |
glial cell (sensu Vertebrata) | 1.57e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.57e-07 | 10 |
glial cell | 1.57e-07 | 10 |
glioblast | 1.57e-07 | 10 |
glioblast (sensu Vertebrata) | 1.57e-07 | 10 |
embryonic cell | 1.95e-07 | 70 |
electrically responsive cell | 6.71e-07 | 39 |
electrically active cell | 6.71e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.11e-21 | 75 |
central nervous system | 3.30e-20 | 73 |
ectoderm-derived structure | 2.12e-16 | 95 |
ectoderm | 2.12e-16 | 95 |
presumptive ectoderm | 2.12e-16 | 95 |
regional part of nervous system | 3.92e-14 | 54 |
tube | 1.90e-13 | 114 |
neural tube | 5.22e-13 | 52 |
neural rod | 5.22e-13 | 52 |
future spinal cord | 5.22e-13 | 52 |
neural keel | 5.22e-13 | 52 |
anatomical conduit | 2.39e-12 | 122 |
neurectoderm | 1.98e-11 | 64 |
neural plate | 1.98e-11 | 64 |
presumptive neural plate | 1.98e-11 | 64 |
brain | 1.06e-10 | 47 |
future brain | 1.06e-10 | 47 |
ecto-epithelium | 1.55e-10 | 73 |
regional part of brain | 2.91e-10 | 46 |
structure with developmental contribution from neural crest | 1.50e-08 | 92 |
gray matter | 2.08e-08 | 34 |
posterior neural tube | 6.37e-08 | 12 |
chordal neural plate | 6.37e-08 | 12 |
anterior neural tube | 3.27e-07 | 40 |