FFCP PHASE1:Mm9::chr7:148930554..148930569,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=171 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:148930554..148930569,+ | |||
|description=CAGE_peak_at_chr7:148930554..148930569,+ | |description=CAGE_peak_at_chr7:148930554..148930569,+ | ||
|id=chr7:148930554..148930569,+ | |id=chr7:148930554..148930569,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.69e-26!43;UBERON:0005409!2.56e-21!59;UBERON:0000344!2.64e-11!15;UBERON:0001242!4.28e-08!13;UBERON:0000060!4.28e-08!13;UBERON:0001262!4.28e-08!13;UBERON:0004786!4.28e-08!13;UBERON:0001007!4.42e-08!128;UBERON:0001555!4.42e-08!128;UBERON:0007026!4.42e-08!128;UBERON:0000331!6.26e-08!3;UBERON:0002116!6.26e-08!3;UBERON:0001204!6.26e-08!3;UBERON:0001168!6.26e-08!3;UBERON:0004119!7.42e-08!130;UBERON:0000925!7.42e-08!130;UBERON:0006595!7.42e-08!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.93e-40,31;UBERON:0005409,1.04e-28,47;UBERON:0002108,9.86e-17,4;UBERON:0000344,3.18e-16,15;UBERON:0000331,9.82e-13,3;UBERON:0002116,9.82e-13,3;UBERON:0001204,9.82e-13,3;UBERON:0001168,9.82e-13,3;UBERON:0001007,1.99e-12,116;UBERON:0001555,1.99e-12,116;UBERON:0007026,1.99e-12,116;UBERON:0004119,3.69e-12,118;UBERON:0000925,3.69e-12,118;UBERON:0006595,3.69e-12,118;UBERON:0001242,6.50e-11,13;UBERON:0001262,6.50e-11,13;UBERON:0004786,6.50e-11,13;UBERON:0004921,5.59e-10,114;UBERON:0004923,9.61e-10,24;UBERON:0001155,2.22e-09,2;UBERON:0000059,2.22e-09,2;UBERON:0001962,1.08e-08,2;UBERON:0001961,1.08e-08,2;UBERON:0001744,1.08e-08,2 | |||
|phase1_expression=0,0,0,0,0,3.69334398206158,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.75291137280604,0,0.430761996159075,1.939241094173,10.2612646506442,2.26827116783938,2.66076612786366,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,5.94753809370836,3.17340679996253,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.951128130562796,4.2707615539006,1.64698954724011,2.5133520880027,2.98434708061726,1.9496408711912,11.6846523125049,23.5590474363417,13.9398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.45294426226567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,6.61036363788144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,3.69334398206158,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.75291137280604,0,0.430761996159075,1.939241094173,10.2612646506442,2.26827116783938,2.66076612786366,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,5.94753809370836,3.17340679996253,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.951128130562796,4.2707615539006,1.64698954724011,2.5133520880027,2.98434708061726,1.9496408711912,11.6846523125049,23.5590474363417,13.9398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.45294426226567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,6.61036363788144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr7:148930554..148930569,+ | |short_description=p@chr7:148930554..148930569,+ | ||
}} | }} |
Latest revision as of 13:22, 4 August 2015
Short description: | p@chr7:148930554..148930569, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148930554..148930569, + |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.93e-40 | 31 |
gastrointestinal system | 1.04e-28 | 47 |
small intestine | 9.86e-17 | 4 |
mucosa | 3.18e-16 | 15 |
ileal mucosa | 9.82e-13 | 3 |
ileum | 9.82e-13 | 3 |
mucosa of small intestine | 9.82e-13 | 3 |
wall of small intestine | 9.82e-13 | 3 |
digestive system | 1.99e-12 | 116 |
digestive tract | 1.99e-12 | 116 |
primitive gut | 1.99e-12 | 116 |
endoderm-derived structure | 3.69e-12 | 118 |
endoderm | 3.69e-12 | 118 |
presumptive endoderm | 3.69e-12 | 118 |
intestinal mucosa | 6.50e-11 | 13 |
wall of intestine | 6.50e-11 | 13 |
gastrointestinal system mucosa | 6.50e-11 | 13 |
subdivision of digestive tract | 5.59e-10 | 114 |
organ component layer | 9.61e-10 | 24 |
colon | 2.22e-09 | 2 |
large intestine | 2.22e-09 | 2 |
gut-associated lymphoid tissue | 1.08e-08 | 2 |
mucosa-associated lymphoid tissue | 1.08e-08 | 2 |
lymphoid tissue | 1.08e-08 | 2 |