FFCP PHASE1:Mm9::chr15:6372301..6372327,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=825 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:6372301..6372327,+ | |||
|description=CAGE_peak_at_chr15:6372301..6372327,+ | |description=CAGE_peak_at_chr15:6372301..6372327,+ | ||
|id=chr15:6372301..6372327,+ | |id=chr15:6372301..6372327,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,4.54e-13,3;CL:0002540,4.54e-13,3;CL:0002194,6.02e-10,4;CL:0000766,6.02e-10,4;CL:0000234,6.02e-10,4;CL:0000576,6.02e-10,4;CL:0000235,6.02e-10,4;CL:0000864,6.02e-10,4;CL:0002009,6.02e-10,4;CL:0000040,6.02e-10,4;CL:0000559,6.02e-10,4;CL:0000878,2.90e-09,2;CL:0000129,2.90e-09,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.18e-09,14;UBERON:0003918,3.18e-09,14;UBERON:0011143,3.18e-09,14;UBERON:0005095,3.18e-09,14;UBERON:0007687,3.18e-09,14;UBERON:0002371,7.44e-09,16;UBERON:0002369,8.36e-09,7;UBERON:0006858,8.36e-09,7;UBERON:0005172,1.81e-07,49;UBERON:0005173,1.81e-07,49;UBERON:0002417,1.81e-07,49;UBERON:0000916,1.81e-07,49;UBERON:0006554,4.62e-07,18 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,3.9119567217402,0,0.439372365468944,0,0.419959264876088,0,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,3.5995988691256,2.96659908770092,2.8419204597844,4.49400165777607,2.30530983192933,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0,0,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0,1.52232739156071,0,1.65794904607885,0.940709657085638,1.25666591329675,10.1349936771093,0,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.305518091550949,0,1.76905930903572,0,0.260240885925407,0,0,0.30140963567143,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0.527853372491847,0,0.834141747676794,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0.213288250535234,0.696710015581316,0,0.403367049246685,0.22237804384487,0,0,2.30578536613615,0.754005626400808,0.198956472041151,1.16978452271472,0,0,0.199141273254367,0,0.114248512609729,1.1270773567308,0.610953983535943,0.387904974335251,0.561086559122548,1.39120381673366,1.32849133181642,2.19798218977925,1.35736880313981,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0.518054945597687,0.289298117163023,3.01582567878545,0,2.95058563811422,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,0,0,1.09060118843252,0,0.632073515871632,0,0,0,0.540183282093931,0.129358683782755,0,0,0.535106452806212,0.658196082408484,0,0.469343416127421,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0.358117032009409,0.328281799490123,0.582961673259701,0,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.418176592028937,0,0.404593039154462,0.165306911450672,0,0,0,0,0.299033092087958,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0.320125762024346,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.685738504770831,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.526139422875686,0,0.561142271657738,0.593175090620871,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0.57386499620653,0.441182838239031,0.231867835620421 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,3.9119567217402,0,0.439372365468944,0,0.419959264876088,0,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,3.5995988691256,2.96659908770092,2.8419204597844,4.49400165777607,2.30530983192933,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0,0,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0,0,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0,1.52232739156071,0,1.65794904607885,0.940709657085638,1.25666591329675,10.1349936771093,0,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.305518091550949,0,1.76905930903572,0,0.260240885925407,0,0,0.30140963567143,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0.527853372491847,0,0.834141747676794,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0.213288250535234,0.696710015581316,0,0.403367049246685,0.22237804384487,0,0,2.30578536613615,0.754005626400808,0.198956472041151,1.16978452271472,0,0,0.199141273254367,0,0.114248512609729,1.1270773567308,0.610953983535943,0.387904974335251,0.561086559122548,1.39120381673366,1.32849133181642,2.19798218977925,1.35736880313981,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0.518054945597687,0.289298117163023,3.01582567878545,0,2.95058563811422,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,0,0,1.09060118843252,0,0.632073515871632,0,0,0,0.540183282093931,0.129358683782755,0,0,0.535106452806212,0.658196082408484,0,0.469343416127421,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0.358117032009409,0.328281799490123,0.582961673259701,0,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.418176592028937,0,0.404593039154462,0.165306911450672,0,0,0,0,0.299033092087958,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0.320125762024346,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.685738504770831,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.526139422875686,0,0.561142271657738,0.593175090620871,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0.57386499620653,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr15:6372301..6372327,+ | |short_description=p@chr15:6372301..6372327,+ | ||
}} | }} |
Latest revision as of 08:53, 5 August 2015
Short description: | p@chr15:6372301..6372327, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:6372301..6372327, + |
Coexpression cluster: | MCL_coexpression_mm9:825 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 4.54e-13 | 3 |
mesenchymal stem cell of the bone marrow | 4.54e-13 | 3 |
monopoietic cell | 6.02e-10 | 4 |
myeloid leukocyte | 6.02e-10 | 4 |
phagocyte | 6.02e-10 | 4 |
monocyte | 6.02e-10 | 4 |
macrophage | 6.02e-10 | 4 |
tissue-resident macrophage | 6.02e-10 | 4 |
macrophage dendritic cell progenitor | 6.02e-10 | 4 |
monoblast | 6.02e-10 | 4 |
promonocyte | 6.02e-10 | 4 |
central nervous system macrophage | 2.90e-09 | 2 |
microglial cell | 2.90e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
kidney | 3.18e-09 | 14 |
kidney mesenchyme | 3.18e-09 | 14 |
upper urinary tract | 3.18e-09 | 14 |
kidney rudiment | 3.18e-09 | 14 |
kidney field | 3.18e-09 | 14 |
bone marrow | 7.44e-09 | 16 |
adrenal gland | 8.36e-09 | 7 |
adrenal/interrenal gland | 8.36e-09 | 7 |
abdomen element | 1.81e-07 | 49 |
abdominal segment element | 1.81e-07 | 49 |
abdominal segment of trunk | 1.81e-07 | 49 |
abdomen | 1.81e-07 | 49 |
urinary system structure | 4.62e-07 | 18 |