FFCP PHASE1:Mm9::chr7:52151495..52151557,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70300 | |EntrezGene=70300 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q5H1 | |UniProt=E9Q5H1 | ||
|association_with_transcript=0bp_to_ENSMUST00000164723_5end | |association_with_transcript=0bp_to_ENSMUST00000164723_5end | ||
|cluster_id=chr7:52151495..52151557,+ | |||
|description=CAGE_peak_2_at_Fuz_5end | |description=CAGE_peak_2_at_Fuz_5end | ||
|id=chr7:52151495..52151557,+ | |id=chr7:52151495..52151557,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.04e-09!50;CL:0000221!1.67e-09!44;CL:0000133!1.67e-09!44;CL:0002319!5.79e-09!43;CL:0000393!2.95e-07!39;CL:0000211!2.95e-07!39;CL:0002453!6.47e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.84e-09,44;CL:0000133,1.84e-09,44;CL:0002319,6.36e-09,43;CL:0000393,2.89e-07,39;CL:0000211,2.89e-07,39;CL:0002453,6.35e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.72e-22!73;UBERON:0005743!6.72e-22!73;UBERON:0000073!3.76e-20!75;UBERON:0001016!3.76e-20!75;UBERON:0004121!1.36e-19!102;UBERON:0000924!1.36e-19!102;UBERON:0006601!1.36e-19!102;UBERON:0002346!9.38e-17!71;UBERON:0003075!9.38e-17!71;UBERON:0007284!9.38e-17!71;UBERON:0000033!9.44e-15!63;UBERON:0000955!3.84e-14!50;UBERON:0006238!3.84e-14!50;UBERON:0001049!9.54e-14!52;UBERON:0005068!9.54e-14!52;UBERON:0006241!9.54e-14!52;UBERON:0007135!9.54e-14!52;UBERON:0002616!9.69e-14!49;UBERON:0003080!4.09e-13!40;UBERON:0002780!6.90e-13!39;UBERON:0001890!6.90e-13!39;UBERON:0006240!6.90e-13!39;UBERON:0003056!1.26e-12!49;UBERON:0002791!1.05e-07!29;UBERON:0003528!1.05e-07!29;UBERON:0001893!1.05e-07!29;UBERON:0002020!1.44e-07!34;UBERON:0001894!6.79e-07!10;UBERON:0006222!6.79e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.27e-22,73;UBERON:0001016,4.09e-20,75;UBERON:0004121,4.65e-17,95;UBERON:0000924,4.65e-17,95;UBERON:0006601,4.65e-17,95;UBERON:0010314,2.27e-15,92;UBERON:0000955,1.20e-14,47;UBERON:0006238,1.20e-14,47;UBERON:0002346,1.86e-14,64;UBERON:0003075,1.86e-14,64;UBERON:0007284,1.86e-14,64;UBERON:0002616,3.06e-14,46;UBERON:0001049,9.16e-14,52;UBERON:0005068,9.16e-14,52;UBERON:0006241,9.16e-14,52;UBERON:0007135,9.16e-14,52;UBERON:0000073,1.34e-13,54;UBERON:0003080,3.93e-13,40;UBERON:0002780,6.64e-13,39;UBERON:0001890,6.64e-13,39;UBERON:0006240,6.64e-13,39;UBERON:0010371,9.73e-13,73;UBERON:0003056,1.21e-12,49;UBERON:0003528,1.03e-07,29;UBERON:0002791,1.03e-07,29;UBERON:0001893,1.03e-07,29;UBERON:0002020,1.41e-07,34;UBERON:0001894,6.67e-07,10;UBERON:0006222,6.67e-07,10 | |||
|phase1_expression=10.890121603126,0,0.454999239389536,0,0,1.17515490338323,0.233612640595526,2.7115897922731,0.563154888606667,0.70219357896598,0.171217968225505,0.319088635981346,2.39681021903688,1.83582845079895,0.999329285446988,0.809901069559304,0.699561878128147,0.788655413395594,1.23402990245165,0.84877930359606,3.82694805679814,3.17731043842833,2.35079810225042,1.43993180514066,0.22940928106717,2.29692785646008,0.430761996159075,0.861884930743556,0.380046838912748,0.504060259519861,1.55211357458713,5.08024538767705,3.69038872550742,0,0.288851619751275,0.664938581433969,1.02084678131185,0,0,0.523523743973798,0,0,0.485510353031154,6.54663453473002,7.60326984146359,6.79122982998222,14.0830441982647,32.0496979879256,33.8316721411087,31.4976436500339,15.2585199571645,34.5006154475932,0.838913030288682,0,2.35265659399725,1.80081605225163,4.29800159908135,7.21940929188419,5.86717736492834,7.93486468908049,6.33831403506179,3.72728985276045,3.55717918444456,2.6996991518442,0.988866362566974,2.8419204597844,15.2796056364386,55.7116542716254,2.38486108309499,3.51015439662396,3.78584930432488,3.99911378165325,4.19650227808066,3.67472397644862,3.06705507258356,3.67687514644008,2.20231761998777,4.21368215681119,4.30098293117482,5.93488294785872,5.58074625974699,9.37644067002168,4.18774498502071,6.19038871034848,8.55670187550137,4.12480019663135,3.98640706237488,3.72798891650601,0.832988126665025,1.43585964202892,3.47837386442013,1.72084775396277,0.679971333707751,1.61910957491345,1.29955283489534,1.79210754838934,3.37066608316204,2.89731548382698,2.33807404142582,3.88673531961374,13.9434985578914,3.84979432242953,0,0,2.16491041011214,1.52015919285059,1.01104889002957,1.48439043634778,2.33044095282455,6.38301197978747,6.59244241711316,6.08930956624282,4.15107895060905,5.27529241934179,4.8211369925639,6.40899615781345,2.22475470960936,4.62717942143717,1.76922110389975,4.85300549842228,2.87093973998512,4.363877278217,1.86391761218122,4.9772735491963,3.14170060220183,1.02182822083437,2.63593273913025,1.19980546198682,2.41433431438823,5.09288173976397,9.60751265919116,4.90051973240171,5.38855392596057,7.16003280524926,5.61027720310812,6.48965052271031,5.70300437561771,3.85661608891288,3.53811861807145,3.15662783829711,7.026503919986,4.36813998423599,3.60124259610698,3.0140963567143,3.06164246180975,4.35586648968489,2.90475346135159,6.20888089773638,3.01795190105979,4.16033376369202,5.27853372491847,5.2606975782618,5.00485048606076,3.1342694986995,6.58502836505419,6.56813080501028,0.702213187313235,2.05878325691772,3.6941254921427,3.31401236056803,1.87620847984877,2.70093092191522,5.44512891845984,2.75469924446365,2.62254091908543,4.41814495025775,2.68273401399619,1.98501082024188,2.63295759861569,4.26835406605648,2.51313309592153,4.82459958503597,5.26920276698522,2.81833479396781,6.30869845692382,5.9684675179985,0,0.264450566663544,3.83918850963421,6.0381534683714,2.19074684247559,2.01683524623343,3.7804267453628,2.28270751335071,1.42358718463353,1.97638745668813,2.01068167040216,4.17808591286417,3.31438948102504,1.79763881730844,1.29682829924817,1.39398891278057,5.50036912763937,3.08470984046268,5.63538678365402,3.66572390121566,6.0125271021964,4.20814919341911,4.7427402843193,3.83786384746966,4.23896565171712,3.45512058981041,1.48226313543574,1.33476084572875,1.76903095601883,1.79889689907883,1.62288097110802,0.964708639009667,1.78238096246994,2.01387296215567,0.810676133875177,1.92192989231657,0,0.744281895337007,0.936113019343682,1.01031551178845,1.4351793081753,1.92977408545347,4.0645701836653,3.7898282354097,4.72598431681875,5.26209765903083,4.22442446919304,4.02015017860358,5.95109102215034,1.95133647857799,3.62560831444239,2.6575762757853,3.82691444777969,3.76885623846197,2.93564469172023,3.90552458170081,1.50791283939272,1.08781136763742,1.47529281905711,3.03530420935206,4.81651769963376,3.6335622843583,3.11476396215683,5.80683132570058,6.62567260774139,3.90438744296638,6.46270193198397,5.73525115086125,6.90675889655422,5.94460714656548,8.50102473517278,4.67609372658099,6.32460444714438,6.10510501201433,6.95506417520516,7.83488656135923,5.04949573996086,10.7230579932148,0,5.82673526771955,4.83717691143602,6.03536255218874,3.54362271456927,2.76691633149535,5.16856586336442,2.18120237686503,3.92147116223193,2.84433082142234,2.10837217149998,3.09406629744561,7.48967132658334,7.92268813737765,12.8065096944927,10.7168517515796,11.7044554203901,13.3776613201553,12.0120785039548,12.4830629136986,3.05073220482823,4.02480934641258,5.51320995137405,1.31909002353184,2.58343082713449,3.1362720962641,2.86493625607528,2.29797259643086,1.45740418314925,3.33765543618917,1.19609616558497,2.88941615148511,2.22233432843654,2.0720530270516,0.956859594047176,1.83022538565218,2.71965487990169,2.79902904647316,3.17859939750175,2.86401185404534,4.4287039101359,6.09958401380546,3.99619761040665,3.76358932826044,4.58561383866973,4.18079473792944,5.78574190077352,3.14107130380836,1.16653475962614,3.72803587852155,3.38215763210514,4.33597983527538,3.30916980914195,5.05573089694524,3.7456348808542,6.42033276864957,2.69921648885234,4.55715346953825,4.19437377702843,2.65742532908607,3.16833006883652,1.26404448251271,4.25722952109345,3.18403967210964,2.5984164595559,2.32734704367726,2.38417625737518,3.36547258655913,2.06765338044408,2.3222283488074,1.98137697303,1.31074040677893,2.43644701849381,2.21287235772758,2.33753804363138,3.40095575422817,1.10992976687032,1.79427713218951,1.84673078000486,6.56844619709447,6.19352168988901,7.8755198434924,3.42989406526505,3.00943262421218,7.90652579663893,5.9842280745933,10.8850147553485,7.90524638780963,4.11049511862385,6.7985450765073,5.40018000185445,5.85417564191487,4.07828168085784,5.69536342927002,2.17953429926771,4.38927360741134,4.26834014385335,4.61902762429759,4.19226325255965,1.47074806760011,4.66718128383392,5.35691148821125,6.73930340142812,4.80124702351215,4.81610669791456,4.71565853465191,4.30750934361459,4.22566005872137,3.4461281373368,2.38146845641537,3.70829843023538,2.70072908649187,2.47251540481984,3.38557516309114,5.14303878578123,3.19456451086807,4.29185141905178,4.0696996657052,4.70546902076653,4.56918882615053,3.65855945745545,3.15683653725411,4.20992752922171,6.17256498823512,2.96587545310435,4.0386837773981,2.86461730218783,3.87342102964915,3.85813221962283,4.99621155875892,5.38042699424439,2.14871054048298,3.82576664137687,4.19123696327079,4.40548887678801 | |phase1_expression=10.890121603126,0,0.454999239389536,0,0,1.17515490338323,0.233612640595526,2.7115897922731,0.563154888606667,0.70219357896598,0.171217968225505,0.319088635981346,2.39681021903688,1.83582845079895,0.999329285446988,0.809901069559304,0.699561878128147,0.788655413395594,1.23402990245165,0.84877930359606,3.82694805679814,3.17731043842833,2.35079810225042,1.43993180514066,0.22940928106717,2.29692785646008,0.430761996159075,0.861884930743556,0.380046838912748,0.504060259519861,1.55211357458713,5.08024538767705,3.69038872550742,0,0.288851619751275,0.664938581433969,1.02084678131185,0,0,0.523523743973798,0,0,0.485510353031154,6.54663453473002,7.60326984146359,6.79122982998222,14.0830441982647,32.0496979879256,33.8316721411087,31.4976436500339,15.2585199571645,34.5006154475932,0.838913030288682,0,2.35265659399725,1.80081605225163,4.29800159908135,7.21940929188419,5.86717736492834,7.93486468908049,6.33831403506179,3.72728985276045,3.55717918444456,2.6996991518442,0.988866362566974,2.8419204597844,15.2796056364386,55.7116542716254,2.38486108309499,3.51015439662396,3.78584930432488,3.99911378165325,4.19650227808066,3.67472397644862,3.06705507258356,3.67687514644008,2.20231761998777,4.21368215681119,4.30098293117482,5.93488294785872,5.58074625974699,9.37644067002168,4.18774498502071,6.19038871034848,8.55670187550137,4.12480019663135,3.98640706237488,3.72798891650601,0.832988126665025,1.43585964202892,3.47837386442013,1.72084775396277,0.679971333707751,1.61910957491345,1.29955283489534,1.79210754838934,3.37066608316204,2.89731548382698,2.33807404142582,3.88673531961374,13.9434985578914,3.84979432242953,0,0,2.16491041011214,1.52015919285059,1.01104889002957,1.48439043634778,2.33044095282455,6.38301197978747,6.59244241711316,6.08930956624282,4.15107895060905,5.27529241934179,4.8211369925639,6.40899615781345,2.22475470960936,4.62717942143717,1.76922110389975,4.85300549842228,2.87093973998512,4.363877278217,1.86391761218122,4.9772735491963,3.14170060220183,1.02182822083437,2.63593273913025,1.19980546198682,2.41433431438823,5.09288173976397,9.60751265919116,4.90051973240171,5.38855392596057,7.16003280524926,5.61027720310812,6.48965052271031,5.70300437561771,3.85661608891288,3.53811861807145,3.15662783829711,7.026503919986,4.36813998423599,3.60124259610698,3.0140963567143,3.06164246180975,4.35586648968489,2.90475346135159,6.20888089773638,3.01795190105979,4.16033376369202,5.27853372491847,5.2606975782618,5.00485048606076,3.1342694986995,6.58502836505419,6.56813080501028,0.702213187313235,2.05878325691772,3.6941254921427,3.31401236056803,1.87620847984877,2.70093092191522,5.44512891845984,2.75469924446365,2.62254091908543,4.41814495025775,2.68273401399619,1.98501082024188,2.63295759861569,4.26835406605648,2.51313309592153,4.82459958503597,5.26920276698522,2.81833479396781,6.30869845692382,5.9684675179985,0,0.264450566663544,3.83918850963421,6.0381534683714,2.19074684247559,2.01683524623343,3.7804267453628,2.28270751335071,1.42358718463353,1.97638745668813,2.01068167040216,4.17808591286417,3.31438948102504,1.79763881730844,1.29682829924817,1.39398891278057,5.50036912763937,3.08470984046268,5.63538678365402,3.66572390121566,6.0125271021964,4.20814919341911,4.7427402843193,3.83786384746966,4.23896565171712,3.45512058981041,1.48226313543574,1.33476084572875,1.76903095601883,1.79889689907883,1.62288097110802,0.964708639009667,1.78238096246994,2.01387296215567,0.810676133875177,1.92192989231657,0,0.744281895337007,0.936113019343682,1.01031551178845,1.4351793081753,1.92977408545347,4.0645701836653,3.7898282354097,4.72598431681875,5.26209765903083,4.22442446919304,4.02015017860358,5.95109102215034,1.95133647857799,3.62560831444239,2.6575762757853,3.82691444777969,3.76885623846197,2.93564469172023,3.90552458170081,1.50791283939272,1.08781136763742,1.47529281905711,3.03530420935206,4.81651769963376,3.6335622843583,3.11476396215683,5.80683132570058,6.62567260774139,3.90438744296638,6.46270193198397,5.73525115086125,6.90675889655422,5.94460714656548,8.50102473517278,4.67609372658099,6.32460444714438,6.10510501201433,6.95506417520516,7.83488656135923,5.04949573996086,10.7230579932148,0,5.82673526771955,4.83717691143602,6.03536255218874,3.54362271456927,2.76691633149535,5.16856586336442,2.18120237686503,3.92147116223193,2.84433082142234,2.10837217149998,3.09406629744561,7.48967132658334,7.92268813737765,12.8065096944927,10.7168517515796,11.7044554203901,13.3776613201553,12.0120785039548,12.4830629136986,3.05073220482823,4.02480934641258,5.51320995137405,1.31909002353184,2.58343082713449,3.1362720962641,2.86493625607528,2.29797259643086,1.45740418314925,3.33765543618917,1.19609616558497,2.88941615148511,2.22233432843654,2.0720530270516,0.956859594047176,1.83022538565218,2.71965487990169,2.79902904647316,3.17859939750175,2.86401185404534,4.4287039101359,6.09958401380546,3.99619761040665,3.76358932826044,4.58561383866973,4.18079473792944,5.78574190077352,3.14107130380836,1.16653475962614,3.72803587852155,3.38215763210514,4.33597983527538,3.30916980914195,5.05573089694524,3.7456348808542,6.42033276864957,2.69921648885234,4.55715346953825,4.19437377702843,2.65742532908607,3.16833006883652,1.26404448251271,4.25722952109345,3.18403967210964,2.5984164595559,2.32734704367726,2.38417625737518,3.36547258655913,2.06765338044408,2.3222283488074,1.98137697303,1.31074040677893,2.43644701849381,2.21287235772758,2.33753804363138,3.40095575422817,1.10992976687032,1.79427713218951,1.84673078000486,6.56844619709447,6.19352168988901,7.8755198434924,3.42989406526505,3.00943262421218,7.90652579663893,5.9842280745933,10.8850147553485,7.90524638780963,4.11049511862385,6.7985450765073,5.40018000185445,5.85417564191487,4.07828168085784,5.69536342927002,2.17953429926771,4.38927360741134,4.26834014385335,4.61902762429759,4.19226325255965,1.47074806760011,4.66718128383392,5.35691148821125,6.73930340142812,4.80124702351215,4.81610669791456,4.71565853465191,4.30750934361459,4.22566005872137,3.4461281373368,2.38146845641537,3.70829843023538,2.70072908649187,2.47251540481984,3.38557516309114,5.14303878578123,3.19456451086807,4.29185141905178,4.0696996657052,4.70546902076653,4.56918882615053,3.65855945745545,3.15683653725411,4.20992752922171,6.17256498823512,2.96587545310435,4.0386837773981,2.86461730218783,3.87342102964915,3.85813221962283,4.99621155875892,5.38042699424439,2.14871054048298,3.82576664137687,4.19123696327079,4.40548887678801 | ||
|short_description=p2@Fuz | |short_description=p2@Fuz | ||
}} | }} |
Latest revision as of 20:28, 26 September 2015
Short description: | p2@Fuz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fuz_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | 0bp_to_ENSMUST00000164723_5end |
EntrezGene: | Fuz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.84e-09 | 44 |
neurectodermal cell | 1.84e-09 | 44 |
neural cell | 6.36e-09 | 43 |
electrically responsive cell | 2.89e-07 | 39 |
electrically active cell | 2.89e-07 | 39 |
oligodendrocyte precursor cell | 6.35e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.27e-22 | 73 |
nervous system | 4.09e-20 | 75 |
ectoderm-derived structure | 4.65e-17 | 95 |
ectoderm | 4.65e-17 | 95 |
presumptive ectoderm | 4.65e-17 | 95 |
structure with developmental contribution from neural crest | 2.27e-15 | 92 |
brain | 1.20e-14 | 47 |
future brain | 1.20e-14 | 47 |
neurectoderm | 1.86e-14 | 64 |
neural plate | 1.86e-14 | 64 |
presumptive neural plate | 1.86e-14 | 64 |
regional part of brain | 3.06e-14 | 46 |
neural tube | 9.16e-14 | 52 |
neural rod | 9.16e-14 | 52 |
future spinal cord | 9.16e-14 | 52 |
neural keel | 9.16e-14 | 52 |
regional part of nervous system | 1.34e-13 | 54 |
anterior neural tube | 3.93e-13 | 40 |
regional part of forebrain | 6.64e-13 | 39 |
forebrain | 6.64e-13 | 39 |
future forebrain | 6.64e-13 | 39 |
ecto-epithelium | 9.73e-13 | 73 |
pre-chordal neural plate | 1.21e-12 | 49 |
brain grey matter | 1.03e-07 | 29 |
regional part of telencephalon | 1.03e-07 | 29 |
telencephalon | 1.03e-07 | 29 |
gray matter | 1.41e-07 | 34 |
diencephalon | 6.67e-07 | 10 |
future diencephalon | 6.67e-07 | 10 |