FFCP PHASE1:Mm9::chr5:73583087..73583161,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2358 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:73583087..73583161,- | |||
|description=CAGE_peak_at_chr5:73583087..73583161,- | |description=CAGE_peak_at_chr5:73583087..73583161,- | ||
|id=chr5:73583087..73583161,- | |id=chr5:73583087..73583161,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.06e-07,9;CL:0002251,1.06e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.81e-20!59;UBERON:0000160!3.70e-14!43;UBERON:0004923!8.66e-14!24;UBERON:0004119!4.20e-10!130;UBERON:0000925!4.20e-10!130;UBERON:0006595!4.20e-10!130;UBERON:0000344!9.56e-10!15;UBERON:0001007!1.72e-09!128;UBERON:0001555!1.72e-09!128;UBERON:0007026!1.72e-09!128;UBERON:0001242!8.55e-09!13;UBERON:0000060!8.55e-09!13;UBERON:0001262!8.55e-09!13;UBERON:0004786!8.55e-09!13;UBERON:0004921!9.09e-09!126;UBERON:0004185!9.09e-09!126;UBERON:0000945!7.81e-07!16;UBERON:0010039!7.81e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.96e-26,47;UBERON:0000160,1.79e-19,31;UBERON:0004923,8.74e-17,24;UBERON:0000344,9.45e-12,15;UBERON:0001242,1.44e-10,13;UBERON:0001262,1.44e-10,13;UBERON:0004786,1.44e-10,13;UBERON:0004119,2.81e-10,118;UBERON:0000925,2.81e-10,118;UBERON:0006595,2.81e-10,118;UBERON:0001007,1.41e-09,116;UBERON:0001555,1.41e-09,116;UBERON:0007026,1.41e-09,116;UBERON:0004921,9.48e-09,114;UBERON:0003350,1.06e-07,9;UBERON:0004808,1.06e-07,9;UBERON:0001277,1.06e-07,9;UBERON:0000945,1.84e-07,16;UBERON:0010039,1.84e-07,16 | |||
|phase1_expression=0,28.964958834067,33.2149444754361,66.2396622761958,59.105696133669,33.4079751104661,25.9310031061034,0.129123323441576,0,0,0,0,0.171200729931206,0,49.6333545105337,87.8742660471845,102.136034206709,0,0.137114433605739,2.12194825899015,0,0,0,21.9189619226967,19.7291981717766,26.988902313406,12.9228598847722,17.8841123129288,25.0830913682414,28.4794046628722,25.0555477040494,1.90509202037889,3.69038872550742,0,22.5304263405994,13.2987716286794,20.0085969137122,1.25559489221072,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,3.23022166303029,0,0,0,0,1.28326477414318,0,0,0,0,0,5.709193985953,0,0,2.60227990149204,3.34912026143355,1.84492397804847,1.05505848386836,2.4693628498498,0,1.48316980640624,0.289198713839823,20.3460426948471,5.66183974815932,21.863310327579,32.9715172131951,59.6453635897991,0.292780797011547,0,31.6766748458653,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,20.029522268225,0,0,0.520481771850815,0,0.180062129805349,0.60281927134286,0,0,0,0.258703370739016,1.07783996466421,0.756424320671277,0,0.43839146485515,0,0,0,0.398068533636986,0,0,0,5.17814431338755,3.04883877975425,0.900310307305074,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0,0.32833492815819,0.648550476366846,0.146199987425332,1.09775057645525,0.402619256281115,0,0,78.9700891331277,13.4869788998408,0.213288250535234,2.09013004674395,5.02583099156164,7.05892336181699,4.22518283305254,6.65789691393957,28.9462727542152,13.3406153326449,22.368833583224,23.6758201728969,25.3453313254856,45.8397898413653,46.685818772934,43.4127975694521,0.189667900953082,1.37098215131675,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,44.2139530147649,47.9603948076215,68.3580821649955,78.3040068559621,67.7707818904291,52.7075513187539,33.9481442191957,42.4794294150593,18.3956146836015,5.75072826109418,7.44281895337007,1.24815069245824,0,0,0,0.184753190166605,1.13694847062291,0.814824882210129,0.339490171550376,0,0.167506257441816,0.952174563544055,0.390267295715598,0.472905432318573,0.664394068946325,0,0.655453258862952,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,1.62886959353576,0.164970122972535,0,1.69946445308487,0.604647113929502,0.377210159511796,1.18120757152309,0.307435147943927,4.13485269069154,0,1.78248689192361,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.720244376125241,0.388076051348264,0,0.354680467284547,0,0,0,5.86679270159276,7.20229040936989,0,0,0,0.0603129249281559,0.238744688006273,0.164140899745061,38.1839895985104,0.18542530201051,41.3507531530803,3.50857675537478,20.3713980106683,108.688599691707,84.3403385038725,74.3529062921199,0,0,0.414599921413271,3.81868247206045,0.632671987162271,1.01659733563424,1.51207477150522,1.46361807210128,4.80397640241591,10.1148259788616,8.59595939543494,8.63794608547298,58.3267379813068,0,0,1.04661582230785,0.827292452285488,0.777804753376191,0.387479470433193,0.168956125490778,1.17357238645754,1.0416350787516,0,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0,0.563047426353546,0.915758121336325,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.518936737920883,2.79317411380722,7.17081144167364,9.96737539980005,7.75568701723535,1.83843508450014,6.00066165064361,4.32673620201678,4.1719497246936,4.29585259998456,7.35089969681695,5.09291121742406,6.64854703036165,4.67383612555546,5.39893408182765,3.81034953026459,3.1288768005111,3.6652751888104,6.1812885120496,8.39033844766065,5.48590803816665,4.96932257246145,6.67621331852499,3.77900683244054,7.24642229198046,4.48457421825885,4.57319932181931,7.10288220882176,4.6173398707593,7.85599180320834,4.74540072496697,4.72821515402705,5.32000356120596,4.18329471202108,5.01557188550968,0,2.8071793013449,6.23126056740065,0.956441660344217,7.0589254118245,6.26043156175138 | |phase1_expression=0,28.964958834067,33.2149444754361,66.2396622761958,59.105696133669,33.4079751104661,25.9310031061034,0.129123323441576,0,0,0,0,0.171200729931206,0,49.6333545105337,87.8742660471845,102.136034206709,0,0.137114433605739,2.12194825899015,0,0,0,21.9189619226967,19.7291981717766,26.988902313406,12.9228598847722,17.8841123129288,25.0830913682414,28.4794046628722,25.0555477040494,1.90509202037889,3.69038872550742,0,22.5304263405994,13.2987716286794,20.0085969137122,1.25559489221072,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,3.23022166303029,0,0,0,0,1.28326477414318,0,0,0,0,0,5.709193985953,0,0,2.60227990149204,3.34912026143355,1.84492397804847,1.05505848386836,2.4693628498498,0,1.48316980640624,0.289198713839823,20.3460426948471,5.66183974815932,21.863310327579,32.9715172131951,59.6453635897991,0.292780797011547,0,31.6766748458653,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,20.029522268225,0,0,0.520481771850815,0,0.180062129805349,0.60281927134286,0,0,0,0.258703370739016,1.07783996466421,0.756424320671277,0,0.43839146485515,0,0,0,0.398068533636986,0,0,0,5.17814431338755,3.04883877975425,0.900310307305074,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0,0.32833492815819,0.648550476366846,0.146199987425332,1.09775057645525,0.402619256281115,0,0,78.9700891331277,13.4869788998408,0.213288250535234,2.09013004674395,5.02583099156164,7.05892336181699,4.22518283305254,6.65789691393957,28.9462727542152,13.3406153326449,22.368833583224,23.6758201728969,25.3453313254856,45.8397898413653,46.685818772934,43.4127975694521,0.189667900953082,1.37098215131675,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,44.2139530147649,47.9603948076215,68.3580821649955,78.3040068559621,67.7707818904291,52.7075513187539,33.9481442191957,42.4794294150593,18.3956146836015,5.75072826109418,7.44281895337007,1.24815069245824,0,0,0,0.184753190166605,1.13694847062291,0.814824882210129,0.339490171550376,0,0.167506257441816,0.952174563544055,0.390267295715598,0.472905432318573,0.664394068946325,0,0.655453258862952,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,1.62886959353576,0.164970122972535,0,1.69946445308487,0.604647113929502,0.377210159511796,1.18120757152309,0.307435147943927,4.13485269069154,0,1.78248689192361,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.720244376125241,0.388076051348264,0,0.354680467284547,0,0,0,5.86679270159276,7.20229040936989,0,0,0,0.0603129249281559,0.238744688006273,0.164140899745061,38.1839895985104,0.18542530201051,41.3507531530803,3.50857675537478,20.3713980106683,108.688599691707,84.3403385038725,74.3529062921199,0,0,0.414599921413271,3.81868247206045,0.632671987162271,1.01659733563424,1.51207477150522,1.46361807210128,4.80397640241591,10.1148259788616,8.59595939543494,8.63794608547298,58.3267379813068,0,0,1.04661582230785,0.827292452285488,0.777804753376191,0.387479470433193,0.168956125490778,1.17357238645754,1.0416350787516,0,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0,0.563047426353546,0.915758121336325,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.518936737920883,2.79317411380722,7.17081144167364,9.96737539980005,7.75568701723535,1.83843508450014,6.00066165064361,4.32673620201678,4.1719497246936,4.29585259998456,7.35089969681695,5.09291121742406,6.64854703036165,4.67383612555546,5.39893408182765,3.81034953026459,3.1288768005111,3.6652751888104,6.1812885120496,8.39033844766065,5.48590803816665,4.96932257246145,6.67621331852499,3.77900683244054,7.24642229198046,4.48457421825885,4.57319932181931,7.10288220882176,4.6173398707593,7.85599180320834,4.74540072496697,4.72821515402705,5.32000356120596,4.18329471202108,5.01557188550968,0,2.8071793013449,6.23126056740065,0.956441660344217,7.0589254118245,6.26043156175138 | ||
|short_description=p@chr5:73583087..73583161,- | |short_description=p@chr5:73583087..73583161,- | ||
}} | }} |
Latest revision as of 14:22, 4 August 2015
Short description: | p@chr5:73583087..73583161, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:73583087..73583161, - |
Coexpression cluster: | MCL_coexpression_mm9:2358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.06e-07 | 9 |
epithelial cell of alimentary canal | 1.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.96e-26 | 47 |
intestine | 1.79e-19 | 31 |
organ component layer | 8.74e-17 | 24 |
mucosa | 9.45e-12 | 15 |
intestinal mucosa | 1.44e-10 | 13 |
wall of intestine | 1.44e-10 | 13 |
gastrointestinal system mucosa | 1.44e-10 | 13 |
endoderm-derived structure | 2.81e-10 | 118 |
endoderm | 2.81e-10 | 118 |
presumptive endoderm | 2.81e-10 | 118 |
digestive system | 1.41e-09 | 116 |
digestive tract | 1.41e-09 | 116 |
primitive gut | 1.41e-09 | 116 |
subdivision of digestive tract | 9.48e-09 | 114 |
epithelium of mucosa | 1.06e-07 | 9 |
gastrointestinal system epithelium | 1.06e-07 | 9 |
intestinal epithelium | 1.06e-07 | 9 |
stomach | 1.84e-07 | 16 |
food storage organ | 1.84e-07 | 16 |