FFCP PHASE1:Mm9::chr6:29298114..29298123,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12321 | |EntrezGene=12321 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1760 | |||
|TSSclassifier=NA | |||
|UniProt=Q6XLQ8,O35887,Q3TQD1,Q3TUF3,Q3UG11 | |UniProt=Q6XLQ8,O35887,Q3TQD1,Q3TUF3,Q3UG11 | ||
|association_with_transcript=0bp_to_ENSMUST00000090481,NM_007594,NM_184053,uc009bdg.1,uc009bdh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000090481,NM_007594,NM_184053,uc009bdg.1,uc009bdh.1_5end | ||
|cluster_id=chr6:29298114..29298123,+ | |||
|description=CAGE_peak_4_at_Calu_5end | |description=CAGE_peak_4_at_Calu_5end | ||
|id=chr6:29298114..29298123,+ | |id=chr6:29298114..29298123,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.03e-11!23;UBERON:0001009!1.03e-11!23;UBERON:0007100!2.12e-11!18;UBERON:0000948!2.12e-11!18;UBERON:0005498!2.12e-11!18;UBERON:0004140!2.12e-11!18;UBERON:0009881!2.12e-11!18;UBERON:0004141!2.12e-11!18;UBERON:0003084!2.12e-11!18;UBERON:0007005!2.12e-11!18;UBERON:0004139!2.12e-11!18;UBERON:0004291!2.12e-11!18;UBERON:0003103!1.67e-09!43;UBERON:0004872!1.67e-08!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.03e-11,23;UBERON:0001009,1.03e-11,23;UBERON:0007100,2.12e-11,18;UBERON:0000948,2.12e-11,18;UBERON:0005498,2.12e-11,18;UBERON:0004140,2.12e-11,18;UBERON:0009881,2.12e-11,18;UBERON:0004141,2.12e-11,18;UBERON:0003084,2.12e-11,18;UBERON:0007005,2.12e-11,18;UBERON:0004139,2.12e-11,18;UBERON:0004291,2.12e-11,18;UBERON:0003103,1.67e-09,43;UBERON:0004872,1.67e-08,33;UBERON:0010314,2.04e-08,92 | |||
|phase1_expression=23.8621782186143,1.74487703819681,2.27499619694768,1.51232105653415,1.00179145989269,2.18243053485457,2.56973904655078,3.35720640948098,1.97104211012333,2.80877431586392,7.19115466547121,7.41881078656629,6.16322627752341,5.07038334030185,5.3297561890506,4.45445588257617,3.49780939064073,5.67831897644828,5.34746291062381,7.21462408056651,6.12311689087702,5.16312946244604,3.39559725880616,3.99981056983517,3.67054849707472,4.59385571292016,4.30761996159075,4.52489588640367,3.04037471130198,4.03248207615889,6.43018480900384,1.27006134691926,1.84519436275371,0,2.59966457776147,2.65975432573588,1.63335485009895,0.418531630736908,2.3440060335714,5.75876118371178,0.588231488031014,4.09827290975067,3.39857247121808,14.3522372492158,14.6996550268296,14.6837401729345,11.7358701652206,6.5407546914134,13.1811709640683,20.0262796046512,22.397827460058,5.75010257459886,3.02008690903925,4.35217285206807,3.02484419228218,31.1283917603496,31.2321449533245,25.2679325215947,13.5552028775931,11.1088105647127,12.0427966666174,8.80995783379743,8.00365316500025,2.2497492932035,0.988866362566974,0.7104801149461,4.49400165777607,3.84218305321555,9.02099627083756,9.31540974488665,10.3059231062177,10.2834354385369,11.4851641294839,8.69684674426174,10.0637744569148,11.0306254393203,5.50579404996943,13.1517958227743,11.5204899942183,14.3756053625911,23.5123244058193,13.022834263919,8.65467296904281,7.31591393041184,9.16789486660861,17.6777151284201,19.0778052270798,11.5567656411686,14.0093457666391,23.1248973926764,11.0148505706638,6.88339101585109,2.03991400112325,5.39703191637817,8.4470934268197,11.6486990645307,6.88177658645584,31.1887490317846,34.8113246167844,27.9138263863169,17.3237406325317,24.3820307087204,30.5766287647975,21.3320010945999,9.52560580449342,11.4011939463794,13.1436355703844,5.02409070763864,9.83963957859253,5.34391700633369,11.2765462397988,8.22056791442781,9.91646638201052,10.5505848386836,10.9357497636205,8.04266184509923,14.3373081285937,8.82056077211461,9.73071607144862,14.7207833452142,11.0420759230197,8.727754556434,11.1835056730873,11.7112318804619,10.2628886338593,3.83185582812887,6.58983184782562,7.19883277192089,4.95573885584952,7.33974133083631,6.40500843946077,7.91622418311046,7.30062144807561,9.71718737855256,11.0127663616567,9.89671704713322,20.1641940423626,8.08645308965605,7.58168275301024,5.6819301089348,12.4915625244196,8.5063778640385,14.2249082546226,12.0563854268572,12.3826428455417,13.9643955110486,12.6497328155634,11.6416516832557,9.7005596819779,10.4008344092301,12.1406275673125,11.836569551089,13.0682207136031,14.626590993931,14.404749548556,12.7381930763836,4.91549231119264,7.46308930632674,7.10408748488982,18.8484453007307,16.8858763186389,21.6074473753218,18.4660893756464,16.7249596985293,20.5175260140213,18.1376476905318,24.681152928765,19.8501082024188,18.2661433403963,19.043425833175,23.9963676255733,19.2983983401439,21.735461413814,20.8019949078576,7.99101804543684,12.1427442607556,2.31293148088659,3.70230793328962,10.2378360256912,7.66381017139447,11.9846739029547,8.47070803418039,8.45036566610507,8.3699275489526,5.69434873853414,10.3760341476127,7.79139147280835,8.15721535368718,6.43381487493096,8.08937467788799,4.32276099749388,6.77080329064848,9.67306294860717,12.1103423366313,12.3978509240388,14.6628956048626,10.861339281387,15.9909669349926,16.4414996523069,9.15182917473533,6.90794402502049,6.54004968785543,2.96452627087149,5.00535317148282,6.4864468387357,8.09503604585473,5.07150303471257,5.788251834058,4.32863948028414,6.90470729881945,8.43103179230184,8.51140380883053,10.0637744569148,13.3970741160661,11.8574315783533,6.81962970457202,8.61107584905178,6.75420929908714,11.6394509804961,9.85355341206521,12.0594082567099,16.6350184059684,13.6120344007331,11.5579317634853,9.28370199455454,12.2934198150413,19.3891227250615,22.1464689648775,18.975117470241,11.6342953448174,11.2245238212832,10.8486793936134,6.03165135757089,4.35124547054968,4.91764273019036,7.17435540392304,8.83028244932856,9.14251155419185,17.3771042099276,10.3513080153793,12.6203287766503,12.1036010731958,10.3403230911743,14.3381278771531,10.9171350300373,12.7384438854975,10.1202675418724,10.8134667427185,10.2774822266096,9.63963949265421,7.80670468645477,12.4645922567079,16.2886959353576,5.93892442701128,5.30980553359851,10.1967867185092,8.46505959501303,6.22396763194464,4.72483028609236,11.0676653259814,7.23599220871019,6.90714086007261,10.3384239731569,6.0046984007805,2.10837217149998,4.12542172992747,4.08527526904546,12.0640933000978,8.5376731296618,12.0028739617692,10.8177542521787,13.0209236849512,13.8221177305782,5.48036908406279,15.4883327322049,25.2080164327946,5.29268155331909,7.74965388824956,11.7869031488011,11.7610203609904,10.9822556482886,7.55048138827282,5.82961673259701,7.97328798645192,2.9048049735635,11.5576646059405,9.07453184111587,4.1441060541032,3.2806614653046,4.80434163733698,7.64902934972349,4.05859211738608,5.8043988997858,8.59203556213602,7.90839983952838,10.775931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| |phase1_expression=23.8621782186143,1.74487703819681,2.27499619694768,1.51232105653415,1.00179145989269,2.18243053485457,2.56973904655078,3.35720640948098,1.97104211012333,2.80877431586392,7.19115466547121,7.41881078656629,6.16322627752341,5.07038334030185,5.3297561890506,4.45445588257617,3.49780939064073,5.67831897644828,5.34746291062381,7.21462408056651,6.12311689087702,5.16312946244604,3.39559725880616,3.99981056983517,3.67054849707472,4.59385571292016,4.30761996159075,4.52489588640367,3.04037471130198,4.03248207615889,6.43018480900384,1.27006134691926,1.84519436275371,0,2.59966457776147,2.65975432573588,1.63335485009895,0.418531630736908,2.3440060335714,5.75876118371178,0.588231488031014,4.09827290975067,3.39857247121808,14.3522372492158,14.6996550268296,14.6837401729345,11.7358701652206,6.5407546914134,13.1811709640683,20.0262796046512,22.397827460058,5.75010257459886,3.02008690903925,4.35217285206807,3.02484419228218,31.1283917603496,31.2321449533245,25.2679325215947,13.5552028775931,11.1088105647127,12.0427966666174,8.80995783379743,8.00365316500025,2.2497492932035,0.988866362566974,0.7104801149461,4.49400165777607,3.84218305321555,9.02099627083756,9.31540974488665,10.3059231062177,10.2834354385369,11.4851641294839,8.69684674426174,10.0637744569148,11.0306254393203,5.50579404996943,13.1517958227743,11.5204899942183,14.3756053625911,23.5123244058193,13.022834263919,8.65467296904281,7.31591393041184,9.16789486660861,17.6777151284201,19.0778052270798,11.5567656411686,14.0093457666391,23.1248973926764,11.0148505706638,6.88339101585109,2.03991400112325,5.39703191637817,8.4470934268197,11.6486990645307,6.88177658645584,31.1887490317846,34.8113246167844,27.9138263863169,17.3237406325317,24.3820307087204,30.5766287647975,21.3320010945999,9.52560580449342,11.4011939463794,13.1436355703844,5.02409070763864,9.83963957859253,5.34391700633369,11.2765462397988,8.22056791442781,9.91646638201052,10.5505848386836,10.9357497636205,8.04266184509923,14.3373081285937,8.82056077211461,9.73071607144862,14.7207833452142,11.0420759230197,8.727754556434,11.1835056730873,11.7112318804619,10.2628886338593,3.83185582812887,6.58983184782562,7.19883277192089,4.95573885584952,7.33974133083631,6.40500843946077,7.91622418311046,7.30062144807561,9.71718737855256,11.0127663616567,9.89671704713322,20.1641940423626,8.08645308965605,7.58168275301024,5.6819301089348,12.4915625244196,8.5063778640385,14.2249082546226,12.0563854268572,12.3826428455417,13.9643955110486,12.6497328155634,11.6416516832557,9.7005596819779,10.4008344092301,12.1406275673125,11.836569551089,13.0682207136031,14.626590993931,14.404749548556,12.7381930763836,4.91549231119264,7.46308930632674,7.10408748488982,18.8484453007307,16.8858763186389,21.6074473753218,18.4660893756464,16.7249596985293,20.5175260140213,18.1376476905318,24.681152928765,19.8501082024188,18.2661433403963,19.043425833175,23.9963676255733,19.2983983401439,21.735461413814,20.8019949078576,7.99101804543684,12.1427442607556,2.31293148088659,3.70230793328962,10.2378360256912,7.66381017139447,11.9846739029547,8.47070803418039,8.45036566610507,8.3699275489526,5.69434873853414,10.3760341476127,7.79139147280835,8.15721535368718,6.43381487493096,8.08937467788799,4.32276099749388,6.77080329064848,9.67306294860717,12.1103423366313,12.3978509240388,14.6628956048626,10.861339281387,15.9909669349926,16.4414996523069,9.15182917473533,6.90794402502049,6.54004968785543,2.96452627087149,5.00535317148282,6.4864468387357,8.09503604585473,5.07150303471257,5.788251834058,4.32863948028414,6.90470729881945,8.43103179230184,8.51140380883053,10.0637744569148,13.3970741160661,11.8574315783533,6.81962970457202,8.61107584905178,6.75420929908714,11.6394509804961,9.85355341206521,12.0594082567099,16.6350184059684,13.6120344007331,11.5579317634853,9.28370199455454,12.2934198150413,19.3891227250615,22.1464689648775,18.975117470241,11.6342953448174,11.2245238212832,10.8486793936134,6.03165135757089,4.35124547054968,4.91764273019036,7.17435540392304,8.83028244932856,9.14251155419185,17.3771042099276,10.3513080153793,12.6203287766503,12.1036010731958,10.3403230911743,14.3381278771531,10.9171350300373,12.7384438854975,10.1202675418724,10.8134667427185,10.2774822266096,9.63963949265421,7.80670468645477,12.4645922567079,16.2886959353576,5.93892442701128,5.30980553359851,10.1967867185092,8.46505959501303,6.22396763194464,4.72483028609236,11.0676653259814,7.23599220871019,6.90714086007261,10.3384239731569,6.0046984007805,2.10837217149998,4.12542172992747,4.08527526904546,12.0640933000978,8.5376731296618,12.0028739617692,10.8177542521787,13.0209236849512,13.8221177305782,5.48036908406279,15.4883327322049,25.2080164327946,5.29268155331909,7.74965388824956,11.7869031488011,11.7610203609904,10.9822556482886,7.55048138827282,5.82961673259701,7.97328798645192,2.9048049735635,11.5576646059405,9.07453184111587,4.1441060541032,3.2806614653046,4.80434163733698,7.64902934972349,4.05859211738608,5.8043988997858,8.59203556213602,7.90839983952838,10.775931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| ||
|short_description=p4@Calu | |short_description=p4@Calu | ||
}} | }} |
Latest revision as of 00:48, 27 September 2015
Short description: | p4@Calu |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Calu_5end |
Coexpression cluster: | MCL_coexpression_mm9:1760 |
Association with transcript: | 0bp_to_ENSMUST00000090481, NM_007594, NM_184053, uc009bdg.1, uc009bdh.1_5end |
EntrezGene: | Calu |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.03e-11 | 23 |
circulatory system | 1.03e-11 | 23 |
primary circulatory organ | 2.12e-11 | 18 |
heart | 2.12e-11 | 18 |
primitive heart tube | 2.12e-11 | 18 |
primary heart field | 2.12e-11 | 18 |
anterior lateral plate mesoderm | 2.12e-11 | 18 |
heart tube | 2.12e-11 | 18 |
heart primordium | 2.12e-11 | 18 |
cardiac mesoderm | 2.12e-11 | 18 |
cardiogenic plate | 2.12e-11 | 18 |
heart rudiment | 2.12e-11 | 18 |
compound organ | 1.67e-09 | 43 |
splanchnic layer of lateral plate mesoderm | 1.67e-08 | 33 |
structure with developmental contribution from neural crest | 2.04e-08 | 92 |