FFCP PHASE1:Mm9::chr17:34335287..34335329,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16913 | |EntrezGene=16913 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=452 | |||
|TSSclassifier=NA | |||
|UniProt=P28063 | |UniProt=P28063 | ||
|association_with_transcript=147bp_to_NM_010724,uc012apv.1_5end | |association_with_transcript=147bp_to_NM_010724,uc012apv.1_5end | ||
|cluster_id=chr17:34335287..34335329,+ | |||
|description=CAGE_peak_1_at_Psmb8_5end | |description=CAGE_peak_1_at_Psmb8_5end | ||
|id=chr17:34335287..34335329,+ | |id=chr17:34335287..34335329,+ | ||
|ontology_enrichment_celltype=CL:0000063!4.22e-13!66;CL:0000219!1.14e-11!54;CL:0002320!6.03e-11!46;CL:0000134!6.03e-11!46;CL:0000988!3.18e-09!32;CL:0002032!3.18e-09!32;CL:0000037!3.18e-09!32;CL:0000566!3.18e-09!32;CL:0000837!3.18e-09!32;CL:0000738!2.78e-07!17;CL:0002087!2.78e-07!17;CL:0002031!4.67e-07!25 | |ontology_enrichment_celltype=CL:0000063!4.22e-13!66;CL:0000219!1.14e-11!54;CL:0002320!6.03e-11!46;CL:0000134!6.03e-11!46;CL:0000988!3.18e-09!32;CL:0002032!3.18e-09!32;CL:0000037!3.18e-09!32;CL:0000566!3.18e-09!32;CL:0000837!3.18e-09!32;CL:0000738!2.78e-07!17;CL:0002087!2.78e-07!17;CL:0002031!4.67e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,6.36e-12,54;CL:0002320,3.32e-11,46;CL:0000134,3.32e-11,46;CL:0000988,1.70e-09,32;CL:0002032,1.70e-09,32;CL:0000037,1.70e-09,32;CL:0000837,1.70e-09,32;CL:0002031,2.62e-07,25;CL:0000738,2.66e-07,17;CL:0002087,2.66e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.71e-17!70;UBERON:0002193!1.18e-16!48;UBERON:0002390!2.74e-15!45;UBERON:0003061!2.74e-15!45;UBERON:0004119!6.81e-13!130;UBERON:0000925!6.81e-13!130;UBERON:0006595!6.81e-13!130;UBERON:0001007!7.98e-13!128;UBERON:0001555!7.98e-13!128;UBERON:0007026!7.98e-13!128;UBERON:0004921!5.31e-12!126;UBERON:0004185!5.31e-12!126;UBERON:0000490!8.94e-12!66;UBERON:0003929!1.11e-11!55;UBERON:0002384!6.03e-11!46;UBERON:0005911!6.71e-11!69;UBERON:0000344!5.32e-09!15;UBERON:0002371!5.52e-09!16;UBERON:0005057!8.18e-09!51;UBERON:0004923!1.46e-08!24;UBERON:0001242!4.27e-08!13;UBERON:0000060!4.27e-08!13;UBERON:0001262!4.27e-08!13;UBERON:0004786!4.27e-08!13;UBERON:0002204!9.37e-08!32;UBERON:0004177!1.02e-07!29;UBERON:0003081!4.71e-07!88;UBERON:0003408!6.87e-07!24;UBERON:0001474!8.19e-07!22;UBERON:0004765!8.19e-07!22;UBERON:0001434!8.19e-07!22;UBERON:0002370!9.25e-07!23;UBERON:0000974!9.25e-07!23;UBERON:0004807!9.25e-07!23;UBERON:0005058!9.25e-07!23;UBERON:0003351!9.25e-07!23;UBERON:0009113!9.25e-07!23;UBERON:0003295!9.25e-07!23;UBERON:0009722!9.25e-07!23;UBERON:0005562!9.25e-07!23;UBERON:0007690!9.25e-07!23 | |ontology_enrichment_uberon=UBERON:0002405!1.71e-17!70;UBERON:0002193!1.18e-16!48;UBERON:0002390!2.74e-15!45;UBERON:0003061!2.74e-15!45;UBERON:0004119!6.81e-13!130;UBERON:0000925!6.81e-13!130;UBERON:0006595!6.81e-13!130;UBERON:0001007!7.98e-13!128;UBERON:0001555!7.98e-13!128;UBERON:0007026!7.98e-13!128;UBERON:0004921!5.31e-12!126;UBERON:0004185!5.31e-12!126;UBERON:0000490!8.94e-12!66;UBERON:0003929!1.11e-11!55;UBERON:0002384!6.03e-11!46;UBERON:0005911!6.71e-11!69;UBERON:0000344!5.32e-09!15;UBERON:0002371!5.52e-09!16;UBERON:0005057!8.18e-09!51;UBERON:0004923!1.46e-08!24;UBERON:0001242!4.27e-08!13;UBERON:0000060!4.27e-08!13;UBERON:0001262!4.27e-08!13;UBERON:0004786!4.27e-08!13;UBERON:0002204!9.37e-08!32;UBERON:0004177!1.02e-07!29;UBERON:0003081!4.71e-07!88;UBERON:0003408!6.87e-07!24;UBERON:0001474!8.19e-07!22;UBERON:0004765!8.19e-07!22;UBERON:0001434!8.19e-07!22;UBERON:0002370!9.25e-07!23;UBERON:0000974!9.25e-07!23;UBERON:0004807!9.25e-07!23;UBERON:0005058!9.25e-07!23;UBERON:0003351!9.25e-07!23;UBERON:0009113!9.25e-07!23;UBERON:0003295!9.25e-07!23;UBERON:0009722!9.25e-07!23;UBERON:0005562!9.25e-07!23;UBERON:0007690!9.25e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.06e-17,48;UBERON:0002405,7.06e-17,48;UBERON:0002390,1.66e-15,45;UBERON:0003061,1.66e-15,45;UBERON:0004119,1.35e-14,118;UBERON:0000925,1.35e-14,118;UBERON:0006595,1.35e-14,118;UBERON:0001007,1.51e-14,116;UBERON:0001555,1.51e-14,116;UBERON:0007026,1.51e-14,116;UBERON:0004921,1.15e-13,114;UBERON:0000490,6.38e-12,66;UBERON:0003929,7.54e-12,55;UBERON:0002384,3.32e-11,46;UBERON:0005911,5.67e-11,69;UBERON:0000344,5.15e-09,15;UBERON:0002371,5.35e-09,16;UBERON:0004923,1.41e-08,24;UBERON:0001242,4.15e-08,13;UBERON:0001262,4.15e-08,13;UBERON:0004786,4.15e-08,13;UBERON:0004177,6.91e-08,29;UBERON:0005057,6.91e-08,29;UBERON:0000077,7.59e-08,35;UBERON:0002204,9.41e-08,32;UBERON:0000160,2.22e-07,31;UBERON:0003408,4.64e-07,24;UBERON:0002370,6.23e-07,23;UBERON:0000974,6.23e-07,23;UBERON:0004807,6.23e-07,23;UBERON:0005058,6.23e-07,23;UBERON:0003351,6.23e-07,23;UBERON:0009113,6.23e-07,23;UBERON:0003295,6.23e-07,23;UBERON:0009722,6.23e-07,23;UBERON:0005562,6.23e-07,23;UBERON:0007690,6.23e-07,23;UBERON:0003081,7.27e-07,87;UBERON:0001474,8.29e-07,22;UBERON:0004765,8.29e-07,22;UBERON:0001434,8.29e-07,22 | |||
|phase1_expression=1.76163731815273,261.382580321881,258.894567212646,276.754753345749,307.049082457111,128.259763740684,145.540675091013,321.000582075759,67.4377979106484,73.028132212462,62.1521224658583,58.0741317486049,272.55156205048,280.79433256982,50.2995740341651,55.883173799592,22.3859801001007,234.388388861171,197.307669958658,218.560670675986,29.7651515528744,144.468333997288,187.280248812617,144.313165359653,167.239365897967,306.065636873306,313.163971207647,226.675736785555,172.731288285844,397.451514631411,226.165120868411,0,0,0,106.008544448718,164.904768195624,112.90565401309,130.163337159178,203.147189576188,129.310364761528,144.70494605563,145.488688296149,138.370450613879,20.0175940581168,24.1277096302445,11.3798986340243,126.747397784382,20.7123898561424,25.2639110144643,28.1923353657711,37.2363881523464,12.9377307928474,165.936997391101,174.812276224734,156.955804199531,10.8048963135098,12.8940047972441,15.9858348606007,0.809265843438391,0.528990979272033,0,19.9918273920788,74.7007628733357,370.308733661296,398.513144114491,425.577588852714,92.5764341501871,68.7750766525583,0.311068836925433,0.135005938331691,0.630974884054146,4.57041575046086,4.19650227808066,0.122490799214954,0.287536413054709,0,3.30347642998166,2.42605942361857,2.30409799884365,0.263772575460388,0,0.52091337055676,2.79182999001381,8.4414391504752,4.12555268997387,0.589257170947335,0.711858403995515,0.745597783301202,9.08714319998209,11.3357340160178,42.6100798391466,79.1589966822876,33.3185953516798,32.382191498269,22.0923981932207,24.1934519032561,29.0719949672726,3.06774580640504,3.63700406444016,3.5333957451034,0.563373679106722,6.41632387071589,0,0,8.01016851741492,8.10751569520315,9.0994400102661,53.5522395882391,110.825414200989,39.3371668521786,3.81667718885499,4.87144765299426,5.07354093963329,10.5505848386836,10.5829836422134,17.7189893774842,3.46072954828123,37.595832799177,48.6535803572431,5.66183974815932,20.5382612168166,27.6378894287077,22.3670113461747,1.17112318804619,1.46612694769419,145.865978524106,186.671963980224,326.347085660414,187.174444478624,2.09706895166752,5.94750783664214,0.251308704225729,1.21677024134594,2.81287003063364,3.53239675751252,1.29793010454206,5.09196819251581,26.74749868117,23.7559392927654,8.20723237957248,0.910843100738926,0.919608417733892,1.0803727788321,1.50704817835715,0.884474488967262,1.15302348256365,2.06143794031403,6.46758426847539,0.431135985865684,0.378212160335639,0,1.7535658594206,1.66828349535359,3.1342694986995,3.90986059175093,1.39323986772945,227.517072689488,227.238201982293,176.465533124663,0.414251545071004,1.40715635988658,0.720248245844059,1.18372367792605,0.983821158737019,1.54267112887378,1.16266972375204,2.14618721119695,3.97002164048376,2.46839774870221,9.02921052435024,8.67436262140656,13.3041988557052,22.1745616443961,18.9231050452124,2.52347938276953,1.3377599609307,207.502995713825,71.401652999157,0.426576501070468,0.696710015581316,2.44848176511977,4.03367049246685,10.0070119730192,16.1691782195675,73.0774754778548,28.8223170767019,45.7430080016491,47.1526838737527,59.0741183970934,74.6020109183004,66.7866574112805,57.5518279705121,1.32767530667157,1.5994791765362,1.1270773567308,2.03651327845314,4.65485969202302,3.7873342740772,6.00747102680444,10.4803205065518,9.26292494264111,7.77402132707343,43.5785361818109,2.8363667971736,3.53806191203765,4.94696647246678,7.50582449137461,7.71766911207734,8.91190481234969,15.8232875597946,17.3484692649288,33.2219309957579,24.4405951096503,79.6381628010597,62.0954969497976,37.3816739361725,32.1121370204223,23.639732546805,58.7515144729803,1.51593129416388,0.977789858652155,2.8856664581782,3.05097322775053,11.0554129911598,16.1869675802489,11.1226179278945,13.8718926813448,30.7835918611797,22.8020319180207,48.175814526427,50.9420696504392,42.8161213401274,309.122132075508,379.102261621641,34.4234991113325,42.2183221846241,4.49541651965817,1.28932855251423,0.163934945376675,8.33154059774431,4.41711507182759,3.12350995437311,3.44677436372478,2.15071918157297,2.67358408898873,1.69845918473299,6.07216052512342,4.67609372658099,5.13874111330481,2.24924921495265,13.0584878391607,3.73937767701236,5.37526965866801,30.3545026269465,2.65490276679926,1.45668381692989,1.81394134178851,3.58349651536206,4.13422650033082,6.7635732547664,14.7304127105886,7.63420831902762,5.34746067577082,12.009396801561,12.6502330289999,13.4076206222643,23.8307724027652,0.36012218806262,1.29358683782755,1.07168517515796,0.709360934569094,1.60531935841864,1.31639216481697,8.82948352432338,18.5390649370331,7.41412248023371,14.3343458735725,24.403165435339,4.68246837418126,3.67908842061751,5.49112782414428,4.26766339337159,64.417264895197,2.78137953015765,70.2279320079175,15.2726282292785,25.0012611949111,35.4132699168819,42.6485990489599,56.7369869552176,154.000457574433,140.651209585276,132.671974852247,7.63736494412091,0.158167996790568,1.42323626988794,2.59212817972323,3.55450103224597,6.76923947613151,6.47348862647139,13.3072063717791,10.7319936213452,20.3495508068115,30.4456263412594,0.56369293868419,0.448549638131936,0.66183396182839,0.194451188344048,1.16243841129958,2.02747350588934,3.28600268208111,1.8228613878153,0.734015410979976,3.38217769156408,2.88030006257865,123.560348165618,73.9947035809099,114.933561067442,162.01126625331,139.103742533633,129.341561962603,167.432261181317,135.578985946262,149.32937947331,137.01983836569,154.869020370187,165.775855138319,149.03214270087,147.264896748777,4.30787728868902,11.7652555288254,1.88399098879899,1.84673078000486,23.5691304719272,39.0379548938458,44.5058446969454,8.1459984050045,24.5770330977328,0.564751842617067,0.920650473014354,2.86447756719698,3.09335728218638,3.42541259885321,1.5107877947794,2.02506750069542,1.35096360967266,1.35942722695261,3.10656187051092,0.31136204275253,0.798049746802062,0.853668028770671,2.91728060481953,3.14419743941973,5.88299227040045,4.88942801163553,5.56294654545014,5.45562656306086,4.54854981174835,4.30914809813408,3.01802146217722,5.80577346313271,3.71345883948242,3.33125719942557,4.28664322154766,4.75125736373908,4.05109362973781,8.24171801606613,3.23837624295674,7.20025430009372,4.08194354166476,5.96090474868302,5.95920308192547,3.76437521661322,4.39995961036718,4.93905526756486,5.78753365163254,3.39510284614654,2.80571135828869,4.74540072496697,5.51625101303155,3.27384834535751,4.18329471202108,4.05103883060397,1.99848462350357,7.01794825336225,7.52048689169044,4.78220830172108,15.4413993383661,11.5933917810211 | |phase1_expression=1.76163731815273,261.382580321881,258.894567212646,276.754753345749,307.049082457111,128.259763740684,145.540675091013,321.000582075759,67.4377979106484,73.028132212462,62.1521224658583,58.0741317486049,272.55156205048,280.79433256982,50.2995740341651,55.883173799592,22.3859801001007,234.388388861171,197.307669958658,218.560670675986,29.7651515528744,144.468333997288,187.280248812617,144.313165359653,167.239365897967,306.065636873306,313.163971207647,226.675736785555,172.731288285844,397.451514631411,226.165120868411,0,0,0,106.008544448718,164.904768195624,112.90565401309,130.163337159178,203.147189576188,129.310364761528,144.70494605563,145.488688296149,138.370450613879,20.0175940581168,24.1277096302445,11.3798986340243,126.747397784382,20.7123898561424,25.2639110144643,28.1923353657711,37.2363881523464,12.9377307928474,165.936997391101,174.812276224734,156.955804199531,10.8048963135098,12.8940047972441,15.9858348606007,0.809265843438391,0.528990979272033,0,19.9918273920788,74.7007628733357,370.308733661296,398.513144114491,425.577588852714,92.5764341501871,68.7750766525583,0.311068836925433,0.135005938331691,0.630974884054146,4.57041575046086,4.19650227808066,0.122490799214954,0.287536413054709,0,3.30347642998166,2.42605942361857,2.30409799884365,0.263772575460388,0,0.52091337055676,2.79182999001381,8.4414391504752,4.12555268997387,0.589257170947335,0.711858403995515,0.745597783301202,9.08714319998209,11.3357340160178,42.6100798391466,79.1589966822876,33.3185953516798,32.382191498269,22.0923981932207,24.1934519032561,29.0719949672726,3.06774580640504,3.63700406444016,3.5333957451034,0.563373679106722,6.41632387071589,0,0,8.01016851741492,8.10751569520315,9.0994400102661,53.5522395882391,110.825414200989,39.3371668521786,3.81667718885499,4.87144765299426,5.07354093963329,10.5505848386836,10.5829836422134,17.7189893774842,3.46072954828123,37.595832799177,48.6535803572431,5.66183974815932,20.5382612168166,27.6378894287077,22.3670113461747,1.17112318804619,1.46612694769419,145.865978524106,186.671963980224,326.347085660414,187.174444478624,2.09706895166752,5.94750783664214,0.251308704225729,1.21677024134594,2.81287003063364,3.53239675751252,1.29793010454206,5.09196819251581,26.74749868117,23.7559392927654,8.20723237957248,0.910843100738926,0.919608417733892,1.0803727788321,1.50704817835715,0.884474488967262,1.15302348256365,2.06143794031403,6.46758426847539,0.431135985865684,0.378212160335639,0,1.7535658594206,1.66828349535359,3.1342694986995,3.90986059175093,1.39323986772945,227.517072689488,227.238201982293,176.465533124663,0.414251545071004,1.40715635988658,0.720248245844059,1.18372367792605,0.983821158737019,1.54267112887378,1.16266972375204,2.14618721119695,3.97002164048376,2.46839774870221,9.02921052435024,8.67436262140656,13.3041988557052,22.1745616443961,18.9231050452124,2.52347938276953,1.3377599609307,207.502995713825,71.401652999157,0.426576501070468,0.696710015581316,2.44848176511977,4.03367049246685,10.0070119730192,16.1691782195675,73.0774754778548,28.8223170767019,45.7430080016491,47.1526838737527,59.0741183970934,74.6020109183004,66.7866574112805,57.5518279705121,1.32767530667157,1.5994791765362,1.1270773567308,2.03651327845314,4.65485969202302,3.7873342740772,6.00747102680444,10.4803205065518,9.26292494264111,7.77402132707343,43.5785361818109,2.8363667971736,3.53806191203765,4.94696647246678,7.50582449137461,7.71766911207734,8.91190481234969,15.8232875597946,17.3484692649288,33.2219309957579,24.4405951096503,79.6381628010597,62.0954969497976,37.3816739361725,32.1121370204223,23.639732546805,58.7515144729803,1.51593129416388,0.977789858652155,2.8856664581782,3.05097322775053,11.0554129911598,16.1869675802489,11.1226179278945,13.8718926813448,30.7835918611797,22.8020319180207,48.175814526427,50.9420696504392,42.8161213401274,309.122132075508,379.102261621641,34.4234991113325,42.2183221846241,4.49541651965817,1.28932855251423,0.163934945376675,8.33154059774431,4.41711507182759,3.12350995437311,3.44677436372478,2.15071918157297,2.67358408898873,1.69845918473299,6.07216052512342,4.67609372658099,5.13874111330481,2.24924921495265,13.0584878391607,3.73937767701236,5.37526965866801,30.3545026269465,2.65490276679926,1.45668381692989,1.81394134178851,3.58349651536206,4.13422650033082,6.7635732547664,14.7304127105886,7.63420831902762,5.34746067577082,12.009396801561,12.6502330289999,13.4076206222643,23.8307724027652,0.36012218806262,1.29358683782755,1.07168517515796,0.709360934569094,1.60531935841864,1.31639216481697,8.82948352432338,18.5390649370331,7.41412248023371,14.3343458735725,24.403165435339,4.68246837418126,3.67908842061751,5.49112782414428,4.26766339337159,64.417264895197,2.78137953015765,70.2279320079175,15.2726282292785,25.0012611949111,35.4132699168819,42.6485990489599,56.7369869552176,154.000457574433,140.651209585276,132.671974852247,7.63736494412091,0.158167996790568,1.42323626988794,2.59212817972323,3.55450103224597,6.76923947613151,6.47348862647139,13.3072063717791,10.7319936213452,20.3495508068115,30.4456263412594,0.56369293868419,0.448549638131936,0.66183396182839,0.194451188344048,1.16243841129958,2.02747350588934,3.28600268208111,1.8228613878153,0.734015410979976,3.38217769156408,2.88030006257865,123.560348165618,73.9947035809099,114.933561067442,162.01126625331,139.103742533633,129.341561962603,167.432261181317,135.578985946262,149.32937947331,137.01983836569,154.869020370187,165.775855138319,149.03214270087,147.264896748777,4.30787728868902,11.7652555288254,1.88399098879899,1.84673078000486,23.5691304719272,39.0379548938458,44.5058446969454,8.1459984050045,24.5770330977328,0.564751842617067,0.920650473014354,2.86447756719698,3.09335728218638,3.42541259885321,1.5107877947794,2.02506750069542,1.35096360967266,1.35942722695261,3.10656187051092,0.31136204275253,0.798049746802062,0.853668028770671,2.91728060481953,3.14419743941973,5.88299227040045,4.88942801163553,5.56294654545014,5.45562656306086,4.54854981174835,4.30914809813408,3.01802146217722,5.80577346313271,3.71345883948242,3.33125719942557,4.28664322154766,4.75125736373908,4.05109362973781,8.24171801606613,3.23837624295674,7.20025430009372,4.08194354166476,5.96090474868302,5.95920308192547,3.76437521661322,4.39995961036718,4.93905526756486,5.78753365163254,3.39510284614654,2.80571135828869,4.74540072496697,5.51625101303155,3.27384834535751,4.18329471202108,4.05103883060397,1.99848462350357,7.01794825336225,7.52048689169044,4.78220830172108,15.4413993383661,11.5933917810211 | ||
|short_description=p1@Psmb8 | |short_description=p1@Psmb8 | ||
}} | }} |
Latest revision as of 07:41, 26 September 2015
Short description: | p1@Psmb8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Psmb8_5end |
Coexpression cluster: | MCL_coexpression_mm9:452 |
Association with transcript: | 147bp_to_NM_010724, uc012apv.1_5end |
EntrezGene: | Psmb8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 6.36e-12 | 54 |
connective tissue cell | 3.32e-11 | 46 |
mesenchymal cell | 3.32e-11 | 46 |
hematopoietic cell | 1.70e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.70e-09 | 32 |
hematopoietic stem cell | 1.70e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.70e-09 | 32 |
hematopoietic lineage restricted progenitor cell | 2.62e-07 | 25 |
leukocyte | 2.66e-07 | 17 |
nongranular leukocyte | 2.66e-07 | 17 |