FFCP PHASE1:Mm9::chr6:52158693..52158704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15403 | |EntrezGene=15403 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=579 | |||
|TSSclassifier=NA | |||
|UniProt=P09092 | |UniProt=P09092 | ||
|association_with_transcript=16bp_to_ENSMUST00000062829_5end | |association_with_transcript=16bp_to_ENSMUST00000062829_5end | ||
|cluster_id=chr6:52158693..52158704,- | |||
|description=CAGE_peak_3_at_Hoxa6_5end | |description=CAGE_peak_3_at_Hoxa6_5end | ||
|id=chr6:52158693..52158704,- | |id=chr6:52158693..52158704,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.06e-10,9;CL:0000540,1.27e-07,33;CL:0000047,1.27e-07,33;CL:0000031,1.27e-07,33;CL:0000404,1.27e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!6.54e-11!14;UBERON:0000117!6.54e-11!14;UBERON:0000171!6.54e-11!14;UBERON:0000170!6.54e-11!14;UBERON:0005597!6.54e-11!14;UBERON:0000118!6.54e-11!14;UBERON:0005157!1.93e-08!27;UBERON:0005153!2.45e-08!17;UBERON:0005178!2.45e-08!17;UBERON:0005181!2.45e-08!17;UBERON:0002224!2.45e-08!17;UBERON:0000915!2.45e-08!17;UBERON:0008947!2.45e-08!17;UBERON:0003258!2.45e-08!17;UBERON:0000310!5.97e-07!6;UBERON:0001443!5.97e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010313,1.16e-30,3;UBERON:0002342,1.16e-30,3;UBERON:0002005,1.16e-30,3;UBERON:0005428,1.16e-30,3;UBERON:0005062,1.16e-30,3;UBERON:0002240,3.50e-15,6;UBERON:0005174,3.50e-15,6;UBERON:0001137,3.50e-15,6;UBERON:0003076,2.69e-13,12;UBERON:0003057,2.69e-13,12;UBERON:0002410,1.06e-10,9;UBERON:0000010,7.27e-09,11;UBERON:0001948,1.20e-08,5;UBERON:0002315,1.20e-08,5;UBERON:0002346,2.33e-07,64;UBERON:0003075,2.33e-07,64;UBERON:0007284,2.33e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,0.883474163806454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0.433798070759735,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0.646703978798527,0.378212160335639,0.351902248327898,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.605050573870028,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.651859905768103,0.678980343100753,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.664394068946325,0.956728611944923,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,0.35163505977661,0.163934945376675,0,6.31016438832513,4.68526493155966,9.26320610251035,0,0,0,0.404810701674894,0,0,0,0.425820255624806,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0.164140899745061,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,1.19707462020309,1.36586884603307,0,0.419226325255965,0.183843508450014,0,0,0.320919209591815,0,0,0.565879024158229,0.468207537349412,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.423073039458382,0,0.526139422875686,0.543216455383447,0,0,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,0.883474163806454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0.433798070759735,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0.646703978798527,0.378212160335639,0.351902248327898,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.605050573870028,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.651859905768103,0.678980343100753,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.664394068946325,0.956728611944923,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,0.35163505977661,0.163934945376675,0,6.31016438832513,4.68526493155966,9.26320610251035,0,0,0,0.404810701674894,0,0,0,0.425820255624806,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0.164140899745061,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,1.19707462020309,1.36586884603307,0,0.419226325255965,0.183843508450014,0,0,0.320919209591815,0,0,0.565879024158229,0.468207537349412,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.423073039458382,0,0.526139422875686,0.543216455383447,0,0,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0,0 | ||
|short_description=p3@Hoxa6 | |short_description=p3@Hoxa6 | ||
}} | }} |
Latest revision as of 13:09, 1 October 2015
Short description: | p3@Hoxa6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hoxa6_5end |
Coexpression cluster: | MCL_coexpression_mm9:579 |
Association with transcript: | 16bp_to_ENSMUST00000062829_5end |
EntrezGene: | Hoxa6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.06e-10 | 9 |
neuron | 1.27e-07 | 33 |
neuronal stem cell | 1.27e-07 | 33 |
neuroblast | 1.27e-07 | 33 |
electrically signaling cell | 1.27e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
neural crest-derived structure | 1.16e-30 | 3 |
neural crest | 1.16e-30 | 3 |
enteric nervous system | 1.16e-30 | 3 |
vagal neural crest | 1.16e-30 | 3 |
neural fold | 1.16e-30 | 3 |
spinal cord | 3.50e-15 | 6 |
dorsal region element | 3.50e-15 | 6 |
dorsum | 3.50e-15 | 6 |
posterior neural tube | 2.69e-13 | 12 |
chordal neural plate | 2.69e-13 | 12 |
autonomic nervous system | 1.06e-10 | 9 |
peripheral nervous system | 7.27e-09 | 11 |
regional part of spinal cord | 1.20e-08 | 5 |
gray matter of spinal cord | 1.20e-08 | 5 |
neurectoderm | 2.33e-07 | 64 |
neural plate | 2.33e-07 | 64 |
presumptive neural plate | 2.33e-07 | 64 |