FFCP PHASE1:Mm9::chr17:36409189..36409193,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=79263 | |EntrezGene=79263 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9ESN2 | |UniProt=Q9ESN2 | ||
|association_with_transcript=0bp_to_ENSMUST00000172832,uc008ckv.1_5end | |association_with_transcript=0bp_to_ENSMUST00000172832,uc008ckv.1_5end | ||
|cluster_id=chr17:36409189..36409193,- | |||
|description=CAGE_peak_10_at_Trim39_5end | |description=CAGE_peak_10_at_Trim39_5end | ||
|id=chr17:36409189..36409193,- | |id=chr17:36409189..36409193,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.54e-15,3;CL:0000351,1.54e-15,3;CL:0002250,4.17e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.03e-08!43 | |ontology_enrichment_uberon=UBERON:0000160!6.03e-08!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.54e-15,3;UBERON:0000307,1.54e-15,3;UBERON:0007010,1.54e-15,3;UBERON:0000161,2.15e-15,5;UBERON:0001911,4.26e-11,2;UBERON:0000076,4.26e-11,2;UBERON:0005333,4.26e-11,2;UBERON:0008425,4.26e-11,2;UBERON:0005311,4.26e-11,2;UBERON:0010147,1.60e-10,2;UBERON:0003937,1.60e-10,2;UBERON:0005399,1.60e-10,2;UBERON:0000165,3.79e-10,2;UBERON:0000166,3.79e-10,2;UBERON:0000930,3.79e-10,2;UBERON:0000162,2.04e-07,3;UBERON:0001353,2.04e-07,3;UBERON:0000163,2.04e-07,3;UBERON:0006866,2.04e-07,3;UBERON:0001046,2.04e-07,3;UBERON:0000164,2.04e-07,3;UBERON:0000931,2.04e-07,3;UBERON:0003100,2.41e-07,11 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0.60492842261366,1.00179145989269,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0.430761996159075,1.07735616342945,0.190023419456374,0,0.886922042621219,0,0.61506478758457,0,1.1554064790051,0.831173226792462,2.04169356262369,0,0,0,0.588231488031014,0,0,0.251793635951155,0,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0.253359865475099,1.01104889002957,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,1.05780226665418,0,0,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0,0,0,0,0.147610147979602,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91764273019036,3.31124095565679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.632073515871632,1.05418608574999,3.09406629744561,0.340439605753788,0,0,0,0,0,0.329098041204242,0,0.938686832254841,1.48282449604674,2.20528398054962,0.16488625294148,0.645857706783622,0.422190474497091,0.716234064018819,0.656563598980245,0.291480836629851,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.432021363287205,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0,0,0,1.36038230169127,3.7737612073591,4.12683740403588,2.18250001273302,0.19318959403219,0.563047426353546,0.36630324853453,2.57242054894879,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0.309873682371932,0,0,0,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0.160148847104794,0,0.454999239389536,0.60492842261366,1.00179145989269,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0.430761996159075,1.07735616342945,0.190023419456374,0,0.886922042621219,0,0.61506478758457,0,1.1554064790051,0.831173226792462,2.04169356262369,0,0,0,0.588231488031014,0,0,0.251793635951155,0,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0.253359865475099,1.01104889002957,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,1.05780226665418,0,0,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0,0,0,0,0.147610147979602,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91764273019036,3.31124095565679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.632073515871632,1.05418608574999,3.09406629744561,0.340439605753788,0,0,0,0,0,0.329098041204242,0,0.938686832254841,1.48282449604674,2.20528398054962,0.16488625294148,0.645857706783622,0.422190474497091,0.716234064018819,0.656563598980245,0.291480836629851,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.432021363287205,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0,0,0,1.36038230169127,3.7737612073591,4.12683740403588,2.18250001273302,0.19318959403219,0.563047426353546,0.36630324853453,2.57242054894879,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0.309873682371932,0,0,0,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p10@Trim39 | |short_description=p10@Trim39 | ||
}} | }} |
Latest revision as of 11:15, 26 September 2015
Short description: | p10@Trim39 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Trim39_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000172832, uc008ckv.1_5end |
EntrezGene: | Trim39 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.54e-15 | 3 |
trophoblast cell | 1.54e-15 | 3 |
intestinal crypt stem cell | 4.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.54e-15 | 3 |
blastula | 1.54e-15 | 3 |
cleaving embryo | 1.54e-15 | 3 |
orifice | 2.15e-15 | 5 |
mammary gland | 4.26e-11 | 2 |
external ectoderm | 4.26e-11 | 2 |
mammary bud | 4.26e-11 | 2 |
mammary ridge | 4.26e-11 | 2 |
mammary placode | 4.26e-11 | 2 |
male accessory sex gland | 1.60e-10 | 2 |
sex gland | 1.60e-10 | 2 |
male reproductive gland | 1.60e-10 | 2 |
mouth | 3.79e-10 | 2 |
oral opening | 3.79e-10 | 2 |
stomodeum | 3.79e-10 | 2 |
cloaca | 2.04e-07 | 3 |
anal region | 2.04e-07 | 3 |
embryonic cloaca | 2.04e-07 | 3 |
terminal part of digestive tract | 2.04e-07 | 3 |
hindgut | 2.04e-07 | 3 |
primitive urogenital sinus | 2.04e-07 | 3 |
proctodeum | 2.04e-07 | 3 |
female organism | 2.41e-07 | 11 |