UBERON:0003975: Difference between revisions
From FANTOM5_SSTAR
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|obo_creation_date= | |obo_creation_date= | ||
|subset=organ_slim | |subset=organ_slim | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:04, 26 June 2012
| Name: | internal female genitalia | ||
|---|---|---|---|
| Definition: | "the internal feminine genital organs, including the ovaries, uterine tubes, uterus, uterine cervix, and vagina." [MP:0009209] | ||
| Xrefs: |
| ||
| Synonyms: |
"female internal genitalia" EXACT [FMA:45654] "internal female genital organ" EXACT [BTO:0003099] "internal genitalia of female reproductive system" EXACT [OBOL:automatic] "organa genitalia feminina interna" RELATED [BTO:0003099] | ||
| Subset: | organ_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003134(female reproductive organ),UBERON:0004175(internal genitalia) |
|---|
Children
| is a: | UBERON:0006834 (uterus or analog) |
|---|---|
| part of: | UBERON:0000996 (vagina) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10013-101C4 (cervix, adult, pool1)
- 10100-102D1 (uterus, adult, pool1)
- 10204-103F6 (vagina, adult)
- 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10530-107F8
- 10552-107I3 (cervical cancer cell line:D98-AH2)
- 10553-107I4 (cervical cancer cell line:ME-180)
- 10569-108B2 (leiomyoma cell line:10964C)
... further results Mouse (Mus musculus)
- 10013-101C4 (cervix, adult, pool1)
- 10100-102D1 (uterus, adult, pool1)
- 10204-103F6 (vagina, adult)
- 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10530-107F8
- 10552-107I3 (cervical cancer cell line:D98-AH2)
- 10553-107I4 (cervical cancer cell line:ME-180)
- 10569-108B2 (leiomyoma cell line:10964C)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003975 (internal female genitalia), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.88e-55 | FFCP PHASE2:Mm9::chr4:35105498..35105509,-#_770b8621e0ec236584b56a0428134704 | p@chr4:35105498..35105509, - |
| 8.88e-55 | FFCP PHASE1:Mm9::chr4:35105498..35105509,-#_770b8621e0ec236584b56a0428134704 | p@chr4:35105498..35105509, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr12:8339024..8339034,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr12:8339024..8339034, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr7:129057811..129057817,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr7:129057811..129057817, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr13:61036176..61036186,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr13:61036176..61036186, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr6:48854959..48854972,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p6@Abp1 |
| 1.64e-52 | FFCP PHASE2:Mm9::chr16:20316875..20316878,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr16:20316875..20316878, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr2:169512387..169512392,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:169512387..169512392, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr12:8339007..8339020,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr12:8339007..8339020, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr10:115614018..115614024,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr10:115614018..115614024, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr2:169512387..169512392,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:169512387..169512392, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr2:131681104..131681114,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:131681104..131681114, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr2:131680870..131680891,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:131680870..131680891, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr9:40297262..40297271,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr9:40297262..40297271, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr5:112904886..112904895,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p6@Sez6l |
| 1.64e-52 | FFCP PHASE2:Mm9::chr2:166407469..166407519,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p4@Prex1 |
| 1.64e-52 | FFCP PHASE1:Mm9::chr9:40297334..40297345,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr9:40297334..40297345, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr7:150952890..150952901,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p2@Mrgprg |
| 1.64e-52 | FFCP PHASE2:Mm9::chr6:121306890..121306895,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p11@Slc6a12 |
| 1.64e-52 | FFCP PHASE1:Mm9::chr5:112904886..112904895,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p6@Sez6l |
| 1.64e-52 | FFCP PHASE2:Mm9::chr6:48855132..48855142,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p11@Abp1 |
| 1.64e-52 | FFCP PHASE1:Mm9::chr13:27434787..27434799,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr13:27434787..27434799, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr12:8339024..8339034,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr12:8339024..8339034, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr7:129057811..129057817,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr7:129057811..129057817, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr10:21130385..21130393,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr10:21130385..21130393, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr10:115614273..115614299,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p17@Ptprr |
| 1.64e-52 | FFCP PHASE1:Mm9::chr2:131681104..131681114,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:131681104..131681114, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr10:115614018..115614024,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr10:115614018..115614024, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr16:92596391..92596400,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr16:92596391..92596400, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr9:40297312..40297323,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr9:40297312..40297323, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr13:61036161..61036172,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr13:61036161..61036172, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr5:112905373..112905419,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr5:112905373..112905419, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr9:40297346..40297350,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr9:40297346..40297350, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr6:97777247..97777258,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr6:97777247..97777258, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr7:150952911..150952917,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p3@Mrgprg |
| 1.64e-52 | FFCP PHASE2:Mm9::chr7:150952861..150952867,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p4@Mrgprg |
| 1.64e-52 | FFCP PHASE2:Mm9::chr14:14765101..14765107,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p1@ENSMUST00000159275, p1@uc007sgd.1 |
| 1.64e-52 | FFCP PHASE2:Mm9::chrX:51027816..51027821,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p2@4930502E18Rik |
| 1.64e-52 | FFCP PHASE1:Mm9::chr5:112905373..112905419,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr5:112905373..112905419, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr6:48855132..48855142,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p11@Abp1 |
| 1.64e-52 | FFCP PHASE2:Mm9::chr4:140462693..140462700,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr4:140462693..140462700, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr2:131681357..131681366,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:131681357..131681366, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr6:121306890..121306895,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p11@Slc6a12 |
| 1.64e-52 | FFCP PHASE1:Mm9::chr2:131681357..131681366,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:131681357..131681366, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr10:21130385..21130393,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr10:21130385..21130393, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr11:46564064..46564079,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p2@Havcr1 |
| 1.64e-52 | FFCP PHASE1:Mm9::chr16:92596391..92596400,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr16:92596391..92596400, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr17:29601992..29602002,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr17:29601992..29602002, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr2:131685562..131685563,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p2@Erv3 |
| 1.64e-52 | FFCP PHASE1:Mm9::chr2:131685562..131685563,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p2@Erv3 |
| 1.64e-52 | FFCP PHASE2:Mm9::chr6:48854959..48854972,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p6@Abp1 |
| 1.64e-52 | FFCP PHASE1:Mm9::chrX:51027816..51027821,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p2@4930502E18Rik |
| 1.64e-52 | FFCP PHASE1:Mm9::chr10:115614273..115614299,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p17@Ptprr |
| 1.64e-52 | FFCP PHASE2:Mm9::chr9:40297334..40297345,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr9:40297334..40297345, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr13:61036176..61036186,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr13:61036176..61036186, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr7:150952890..150952901,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p2@Mrgprg |
| 1.64e-52 | FFCP PHASE2:Mm9::chr2:131681543..131681554,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:131681543..131681554, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr2:131681543..131681554,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:131681543..131681554, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr13:27437553..27437554,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p3@Prl8a2 |
| 1.64e-52 | FFCP PHASE2:Mm9::chr13:27437553..27437554,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p3@Prl8a2 |
| 1.64e-52 | FFCP PHASE1:Mm9::chr14:56857569..56857584,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr14:56857569..56857584, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr9:40297262..40297271,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr9:40297262..40297271, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr12:8339007..8339020,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr12:8339007..8339020, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr2:166407469..166407519,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p4@Prex1 |
| 1.64e-52 | FFCP PHASE2:Mm9::chr13:61036161..61036172,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr13:61036161..61036172, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr13:27434787..27434799,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr13:27434787..27434799, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr2:124475078..124475084,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:124475078..124475084, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr17:29601992..29602002,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr17:29601992..29602002, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr9:40297346..40297350,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr9:40297346..40297350, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr14:56857569..56857584,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr14:56857569..56857584, - |
| 1.64e-52 | FFCP PHASE2:Mm9::chr11:46564064..46564079,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p2@Havcr1 |
| 1.64e-52 | FFCP PHASE2:Mm9::chr6:121306916..121306921,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p12@Slc6a12 |
| 1.64e-52 | FFCP PHASE2:Mm9::chr7:150952911..150952917,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p3@Mrgprg |
| 1.64e-52 | FFCP PHASE1:Mm9::chr6:121306916..121306921,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p12@Slc6a12 |
| 1.64e-52 | FFCP PHASE1:Mm9::chr14:14765101..14765107,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p1@ENSMUST00000159275, p1@uc007sgd.1 |
| 1.64e-52 | FFCP PHASE2:Mm9::chr2:131680870..131680891,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:131680870..131680891, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr4:140462693..140462700,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr4:140462693..140462700, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr6:97777247..97777258,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr6:97777247..97777258, + |
| 1.64e-52 | FFCP PHASE2:Mm9::chr2:124475078..124475084,+#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr2:124475078..124475084, + |
| 1.64e-52 | FFCP PHASE1:Mm9::chr9:40297312..40297323,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr9:40297312..40297323, - |
| 1.64e-52 | FFCP PHASE1:Mm9::chr7:150952861..150952867,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p4@Mrgprg |
| 1.64e-52 | FFCP PHASE1:Mm9::chr16:20316875..20316878,-#_0d29bc3c775b78acc948bc5c81ca9f25 | p@chr16:20316875..20316878, - |
| 3.83e-49 | FFCP PHASE1:Mm9::chr6:97777273..97777296,+#_5d718256161a7a5891090a0242aa0ab6 | p@chr6:97777273..97777296, + |
| 3.83e-49 | FFCP PHASE2:Mm9::chr6:97777273..97777296,+#_5d718256161a7a5891090a0242aa0ab6 | p@chr6:97777273..97777296, + |
| 4.8e-49 | FFCP PHASE2:Mm9::chr9:8900490..8900502,+#_ed8710026df5196fce6f14cc07004bbb | p4@Pgr |
| 4.8e-49 | FFCP PHASE1:Mm9::chr9:8900490..8900502,+#_ed8710026df5196fce6f14cc07004bbb | p4@Pgr |
| 8.33e-47 | FFCP PHASE1:Mm9::chr10:97030695..97030725,+#_6e0e48b2b4de4454a52901046cbb1cd8 | p@chr10:97030695..97030725, + |
| 8.33e-47 | FFCP PHASE2:Mm9::chr10:97030695..97030725,+#_6e0e48b2b4de4454a52901046cbb1cd8 | p@chr10:97030695..97030725, + |
| 1.86e-44 | FFCP PHASE1:Mm9::chr10:120813509..120813534,+#_689e7f478d24a3d74373bd358e097207 | p@chr10:120813509..120813534, + |
| 1.86e-44 | FFCP PHASE2:Mm9::chr10:120813509..120813534,+#_689e7f478d24a3d74373bd358e097207 | p@chr10:120813509..120813534, + |
| 5.82e-44 | FFCP PHASE1:Hg19::chr22:44708774..44708788,-#_0112ea55266ecba9d4f87122f42b3a52 | p3@KIAA1644 |
| 5.82e-44 | FFCP PHASE2:Hg19::chr22:44708774..44708788,-#_0112ea55266ecba9d4f87122f42b3a52 | p3@KIAA1644 |
| 9.17e-41 | FFCP PHASE1:Mm9::chr14:56853487..56853492,-#_99d324a3c02765c65641a20c8cb0432a | p1@Gzmc, p2@Gzmf |
| 9.17e-41 | FFCP PHASE2:Mm9::chr14:56853487..56853492,-#_99d324a3c02765c65641a20c8cb0432a | p1@Gzmc, p2@Gzmf |
| 1.16e-40 | FFCP PHASE2:Mm9::chr9:8900563..8900574,+#_48aa253b2d7f0bff32af1c41c842825a | p5@Pgr |
| 1.16e-40 | FFCP PHASE1:Mm9::chr9:8900563..8900574,+#_48aa253b2d7f0bff32af1c41c842825a | p5@Pgr |
| 1.28e-40 | FFCP PHASE2:Mm9::chr9:8899828..8899855,+#_0756df442731ac70e9c3e8e72a688986 | p3@Pgr |
| 1.28e-40 | FFCP PHASE1:Mm9::chr9:8899828..8899855,+#_0756df442731ac70e9c3e8e72a688986 | p3@Pgr |
| 1.54e-40 | FFCP PHASE2:Mm9::chr9:8900409..8900425,+#_bf83e3ae280c62b9eacadf8b45ac3ba7 | p2@Pgr |
| 1.54e-40 | FFCP PHASE1:Mm9::chr9:8900409..8900425,+#_bf83e3ae280c62b9eacadf8b45ac3ba7 | p2@Pgr |
