UBERON:0004875: Difference between revisions
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|xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003 | |xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003 | ||
|is_a=UBERON:0005423 | |is_a=UBERON:0005423 | ||
|synonym= | |synonym="chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
|comment=part_of or develops_from urogenital ridge? | |comment=part_of or develops_from urogenital ridge? | ||
|alt_id= | |alt_id= | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:05, 26 June 2012
| Name: | nephrogenic cord | ||
|---|---|---|---|
| Definition: | "a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord] | ||
| Xrefs: |
| ||
| Synonyms: | "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
| Comments: | part_of or develops_from urogenital ridge? |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|
Children
| part of: | UBERON:0005754 (rostral part of nephrogenic cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35651764..35651782,-#_2c808356ccd804cd36d69a04f78b05be | p2@9230110F15Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:89597660..89597668, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:51676936..51676963,-#_2c808356ccd804cd36d69a04f78b05be | p6@Rnase12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_2c808356ccd804cd36d69a04f78b05be | p@chr15:83143938..83143953, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_2c808356ccd804cd36d69a04f78b05be | p@chr14:63611303..63611312, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:59845349..59845371,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:59845349..59845371, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:63611201..63611210,+#_2c808356ccd804cd36d69a04f78b05be | p@chr14:63611201..63611210, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_2c808356ccd804cd36d69a04f78b05be | p4@Bpi |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:16664708..16664723,+#_2c808356ccd804cd36d69a04f78b05be | p@chr12:16664708..16664723, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_2c808356ccd804cd36d69a04f78b05be | p@chr9:100350777..100350782, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:110132148..110132154,+#_2c808356ccd804cd36d69a04f78b05be | p3@Wdr25 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:105798218..105798228,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:105798218..105798228, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21383212..21383225,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21383212..21383225, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:12571771..12571780, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:73221016..73221031,+#_2c808356ccd804cd36d69a04f78b05be | p@chr17:73221016..73221031, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:52101299..52101305,+#_2c808356ccd804cd36d69a04f78b05be | p@chr10:52101299..52101305, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr3:103650758..103650778,+#_2c808356ccd804cd36d69a04f78b05be | p@chr3:103650758..103650778, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:92995710..92995753,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:92995710..92995753, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:75304916..75304925,+#_2c808356ccd804cd36d69a04f78b05be | p@chr15:75304916..75304925, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19141482..19141496,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19141482..19141496, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_2c808356ccd804cd36d69a04f78b05be | p3@Glb1l2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:150092027..150092070,-#_2c808356ccd804cd36d69a04f78b05be | p@chr4:150092027..150092070, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:25678985..25679033, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:164499572..164499580,-#_2c808356ccd804cd36d69a04f78b05be | p2@Wfdc11 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:101959194..101959224,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:101959194..101959224, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:25706074..25706082,-#_2c808356ccd804cd36d69a04f78b05be | p3@Ido1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:158083961..158083968,+#_2c808356ccd804cd36d69a04f78b05be | p4@Bpi |
| 4.54e-44 | FFCP PHASE1:Mm9::chr19:24582739..24582748,-#_2c808356ccd804cd36d69a04f78b05be | p@chr19:24582739..24582748, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_2c808356ccd804cd36d69a04f78b05be | p@chr10:116399500..116399516, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_2c808356ccd804cd36d69a04f78b05be | p2@Rnase10 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:62816857..62816866,+#_2c808356ccd804cd36d69a04f78b05be | p7@Spink10 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:25349488..25349492,-#_2c808356ccd804cd36d69a04f78b05be | p6@Lcn12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:54678915..54678922,-#_2c808356ccd804cd36d69a04f78b05be | p@chr15:54678915..54678922, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:17224952..17224968,+#_2c808356ccd804cd36d69a04f78b05be | p@chr11:17224952..17224968, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:50280199..50280211,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:50280199..50280211, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:75304900..75304907,+#_2c808356ccd804cd36d69a04f78b05be | p@chr15:75304900..75304907, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379878..31379883,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31379878..31379883, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378766..21378781,+#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21378766..21378781, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:101959282..101959299, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:92995710..92995753, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21383212..21383225,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21383212..21383225, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:112721323..112721328,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:112721323..112721328, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:113585714..113585722,-#_2c808356ccd804cd36d69a04f78b05be | p@chr8:113585714..113585722, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:39707572..39707583,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:39707572..39707583, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:20419453..20419476, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_2c808356ccd804cd36d69a04f78b05be | p2@ENSMUST00000152401 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_2c808356ccd804cd36d69a04f78b05be | p@chr1:155722142..155722175, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379261..21379264, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:105797824..105797838,-#_2c808356ccd804cd36d69a04f78b05be | p13@Cyb561 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164499572..164499580,-#_2c808356ccd804cd36d69a04f78b05be | p2@Wfdc11 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_2c808356ccd804cd36d69a04f78b05be | p11@Arhgef40 |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:75798097..75798101, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:130496286..130496293,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:130496286..130496293, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:192816674..192816714, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:43230846..43230884, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:116901540..116901549,-#_2c808356ccd804cd36d69a04f78b05be | p4@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:23683348..23683398,+#_2c808356ccd804cd36d69a04f78b05be | p@chr13:23683348..23683398, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19141371..19141383, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26611214..26611227,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:26611214..26611227, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr18:44261480..44261486,+#_2c808356ccd804cd36d69a04f78b05be | p@chr18:44261480..44261486, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_2c808356ccd804cd36d69a04f78b05be | p3@Rnase13 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:44319583..44319592,-#_2c808356ccd804cd36d69a04f78b05be | p@chr18:44319583..44319592, - |
