UBERON:0004910: Difference between revisions
From FANTOM5_SSTAR
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|has_quality= | |has_quality= | ||
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|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
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Revision as of 17:05, 26 June 2012
| Name: | epithelium of male gonad | ||
|---|---|---|---|
| Definition: | "An epithelium surrounding a testis." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"testis epithelium" EXACT [OBOL:automatic] "testis sheath" NARROW SENSU [FBbt:00004955] | ||
| Comments: | Note that after reasoning this should subsume the more specific germinal epithelium classes. We include the fly structure here although it is not clear if the sheath is an epithelium or a multi-tissue structure that includes epithelium as parts |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004909(epithelium of gonad) |
|---|
Children
| is a: | UBERON:0004813 (seminiferous tubule epithelium),UBERON:0005297 (testis sex cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11255-116F4 (Sertoli Cells, donor1)
- 11333-117F1 (Sertoli Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004910 (epithelium of male gonad), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:27721743..27721753,-#_3aa22549d356ce2617e9b96e469e5ec2 | p26@BDNF |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:27721743..27721753,-#_3aa22549d356ce2617e9b96e469e5ec2 | p26@BDNF |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:227505905..227505906,-#_dd1b52ad56e4dcfa03104373e55932d0 | p43@CDC42BPA |
| 9.37e-99 | FFCP PHASE1:Hg19::chr3:158450428..158450431,-#_dd1b52ad56e4dcfa03104373e55932d0 | p9@RARRES1 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr3:158450428..158450431,-#_dd1b52ad56e4dcfa03104373e55932d0 | p9@RARRES1 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:227505905..227505906,-#_dd1b52ad56e4dcfa03104373e55932d0 | p43@CDC42BPA |
| 2.55e-98 | FFCP PHASE1:Hg19::chr19:54600897..54600899,+#_a733cadb9763bfdda9f220d20157e02c | p@chr19:54600897..54600899, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr19:40320572..40320586,-#_a733cadb9763bfdda9f220d20157e02c | p@chr19:40320572..40320586, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr13:53030077..53030083,-#_a733cadb9763bfdda9f220d20157e02c | p@chr13:53030077..53030083, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:18206831..18206833,+#_a733cadb9763bfdda9f220d20157e02c | p@chr7:18206831..18206833, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr19:54600897..54600899,+#_a733cadb9763bfdda9f220d20157e02c | p@chr19:54600897..54600899, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:193356854..193356864,+#_a733cadb9763bfdda9f220d20157e02c | p@chr3:193356854..193356864, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:170430340..170430344,+#_a733cadb9763bfdda9f220d20157e02c | p@chr3:170430340..170430344, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:69832864..69832865,+#_a733cadb9763bfdda9f220d20157e02c | p@chr8:69832864..69832865, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:9519086..9519101,+#_a733cadb9763bfdda9f220d20157e02c | p@chr2:9519086..9519101, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr7:89874193..89874199,+#_a733cadb9763bfdda9f220d20157e02c | p7@C7orf63 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:18206831..18206833,+#_a733cadb9763bfdda9f220d20157e02c | p@chr7:18206831..18206833, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr19:40320572..40320586,-#_a733cadb9763bfdda9f220d20157e02c | p@chr19:40320572..40320586, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:9519086..9519101,+#_a733cadb9763bfdda9f220d20157e02c | p@chr2:9519086..9519101, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:193356854..193356864,+#_a733cadb9763bfdda9f220d20157e02c | p@chr3:193356854..193356864, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:170430340..170430344,+#_a733cadb9763bfdda9f220d20157e02c | p@chr3:170430340..170430344, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:47529304..47529311,-#_a733cadb9763bfdda9f220d20157e02c | p@chr8:47529304..47529311, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr7:89874193..89874199,+#_a733cadb9763bfdda9f220d20157e02c | p7@C7orf63 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:69832864..69832865,+#_a733cadb9763bfdda9f220d20157e02c | p@chr8:69832864..69832865, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:47529304..47529311,-#_a733cadb9763bfdda9f220d20157e02c | p@chr8:47529304..47529311, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr13:53030077..53030083,-#_a733cadb9763bfdda9f220d20157e02c | p@chr13:53030077..53030083, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:19551668..19551679,-#_075466a69953b146549ccafd0795de65 | p@chr2:19551668..19551679, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:19551668..19551679,-#_075466a69953b146549ccafd0795de65 | p@chr2:19551668..19551679, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:112931461..112931474,-#_79322a749f85cfdbf0315795a62d30e1 | p@chr3:112931461..112931474, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:197889533..197889548,+#_79322a749f85cfdbf0315795a62d30e1 | p@chr1:197889533..197889548, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:98445585..98445594,-#_79322a749f85cfdbf0315795a62d30e1 | p22@TMEM130 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:72803155..72803204,-#_79322a749f85cfdbf0315795a62d30e1 | p@chr2:72803155..72803204, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:197889533..197889548,+#_79322a749f85cfdbf0315795a62d30e1 | p@chr1:197889533..197889548, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:72803155..72803204,-#_79322a749f85cfdbf0315795a62d30e1 | p@chr2:72803155..72803204, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:15815732..15815744,-#_79322a749f85cfdbf0315795a62d30e1 | p21@EPS8 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:15815732..15815744,-#_79322a749f85cfdbf0315795a62d30e1 | p21@EPS8 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:98445585..98445594,-#_79322a749f85cfdbf0315795a62d30e1 | p22@TMEM130 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:112931461..112931474,-#_79322a749f85cfdbf0315795a62d30e1 | p@chr3:112931461..112931474, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr21:48080873..48080878,+#_3f7e00d6dafc41ff0b6f36d869e65204 | p@chr21:48080873..48080878, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:141728731..141728740,-#_3f7e00d6dafc41ff0b6f36d869e65204 | p38@PTK2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_3f7e00d6dafc41ff0b6f36d869e65204 | p@chr5:75912402..75912418, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:99984127..99984138,+#_3f7e00d6dafc41ff0b6f36d869e65204 | p@chr3:99984127..99984138, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:170916991..170916995,-#_3f7e00d6dafc41ff0b6f36d869e65204 | p@chr3:170916991..170916995, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr10:1034666..1034675,+#_3f7e00d6dafc41ff0b6f36d869e65204 | p4@GTPBP4 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:141728731..141728740,-#_3f7e00d6dafc41ff0b6f36d869e65204 | p38@PTK2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:90830481..90830492,+#_3f7e00d6dafc41ff0b6f36d869e65204 | p@chr5:90830481..90830492, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_3f7e00d6dafc41ff0b6f36d869e65204 | p@chr5:75912402..75912418, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:99984127..99984138,+#_3f7e00d6dafc41ff0b6f36d869e65204 | p@chr3:99984127..99984138, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr10:1034666..1034675,+#_3f7e00d6dafc41ff0b6f36d869e65204 | p4@GTPBP4 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:90830481..90830492,+#_3f7e00d6dafc41ff0b6f36d869e65204 | p@chr5:90830481..90830492, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:170916991..170916995,-#_3f7e00d6dafc41ff0b6f36d869e65204 | p@chr3:170916991..170916995, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr21:48080873..48080878,+#_3f7e00d6dafc41ff0b6f36d869e65204 | p@chr21:48080873..48080878, + |
| 6.41e-58 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_53841b7e8ffa84a6961ed5a07919d44e | p4@Spink12 |
| 6.41e-58 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_53841b7e8ffa84a6961ed5a07919d44e | p4@Spink12 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:134210772..134210782,+#_8290e4d77f814f5e4430ac363d332c92 | p8@TCF21 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr2:177009137..177009140,+#_8290e4d77f814f5e4430ac363d332c92 | p@chr2:177009137..177009140, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr11:114173606..114173612,+#_8290e4d77f814f5e4430ac363d332c92 | p@chr11:114173606..114173612, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr11:114173606..114173612,+#_8290e4d77f814f5e4430ac363d332c92 | p@chr11:114173606..114173612, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr2:177009137..177009140,+#_8290e4d77f814f5e4430ac363d332c92 | p@chr2:177009137..177009140, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:134210772..134210782,+#_8290e4d77f814f5e4430ac363d332c92 | p8@TCF21 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr15:39288691..39288698,+#_f47dcb995eb7ead4624d096efc33e0e0 | p@chr15:39288691..39288698, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr15:39288691..39288698,+#_f47dcb995eb7ead4624d096efc33e0e0 | p@chr15:39288691..39288698, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr3:46477553..46477563,-#_f47dcb995eb7ead4624d096efc33e0e0 | p@chr3:46477553..46477563, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr5:144875561..144875565,+#_f47dcb995eb7ead4624d096efc33e0e0 | p@chr5:144875561..144875565, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr7:137564648..137564658,-#_f47dcb995eb7ead4624d096efc33e0e0 | p32@CREB3L2 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr19:54024454..54024463,+#_f47dcb995eb7ead4624d096efc33e0e0 | p31@ZNF331 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr5:144875561..144875565,+#_f47dcb995eb7ead4624d096efc33e0e0 | p@chr5:144875561..144875565, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr7:137564648..137564658,-#_f47dcb995eb7ead4624d096efc33e0e0 | p32@CREB3L2 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr21:17214724..17214740,+#_f47dcb995eb7ead4624d096efc33e0e0 | p11@USP25 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:55459485..55459491,-#_f47dcb995eb7ead4624d096efc33e0e0 | p6@C2orf63 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr3:46477553..46477563,-#_f47dcb995eb7ead4624d096efc33e0e0 | p@chr3:46477553..46477563, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr19:54024454..54024463,+#_f47dcb995eb7ead4624d096efc33e0e0 | p31@ZNF331 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr21:17214724..17214740,+#_f47dcb995eb7ead4624d096efc33e0e0 | p11@USP25 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:55459485..55459491,-#_f47dcb995eb7ead4624d096efc33e0e0 | p6@C2orf63 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr4:103969123..103969127,-#_112befab8b9566dbe8399a7e8c658d5b | p@chr4:103969123..103969127, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr4:103969123..103969127,-#_112befab8b9566dbe8399a7e8c658d5b | p@chr4:103969123..103969127, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:5198350..5198359,+#_112befab8b9566dbe8399a7e8c658d5b | p@chr12:5198350..5198359, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:5198350..5198359,+#_112befab8b9566dbe8399a7e8c658d5b | p@chr12:5198350..5198359, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr14:64804787..64804796,-#_112befab8b9566dbe8399a7e8c658d5b | p10@ESR2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr14:64804787..64804796,-#_112befab8b9566dbe8399a7e8c658d5b | p10@ESR2 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr15:39420650..39420666,+#_112befab8b9566dbe8399a7e8c658d5b | p@chr15:39420650..39420666, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr15:39420650..39420666,+#_112befab8b9566dbe8399a7e8c658d5b | p@chr15:39420650..39420666, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:829412..829430,+#_112befab8b9566dbe8399a7e8c658d5b | p11@EFCAB4A |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:829412..829430,+#_112befab8b9566dbe8399a7e8c658d5b | p11@EFCAB4A |
| 6.58e-50 | FFCP PHASE1:Hg19::chr14:50697797..50697820,-#_80c550d1cbcd215d3de278841042d7e3 | p13@SOS2 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr17:58165788..58165794,-#_80c550d1cbcd215d3de278841042d7e3 | p1@LOC645638 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr7:92462738..92462749,-#_80c550d1cbcd215d3de278841042d7e3 | p51@CDK6 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr16:1203194..1203207,+#_80c550d1cbcd215d3de278841042d7e3 | p3@CACNA1H |
| 6.58e-50 | FFCP PHASE1:Hg19::chr17:58165788..58165794,-#_80c550d1cbcd215d3de278841042d7e3 | p1@LOC645638 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr16:1203194..1203207,+#_80c550d1cbcd215d3de278841042d7e3 | p3@CACNA1H |
| 6.58e-50 | FFCP PHASE1:Hg19::chr7:92462738..92462749,-#_80c550d1cbcd215d3de278841042d7e3 | p51@CDK6 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr14:50697797..50697820,-#_80c550d1cbcd215d3de278841042d7e3 | p13@SOS2 |
| 4.52e-44 | FFCP PHASE1:Mm9::chr17:75581992..75582009,+#_d2f7da8088205461b5ecfeb19f8a62fc | p@chr17:75581992..75582009, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr17:75581992..75582009,+#_d2f7da8088205461b5ecfeb19f8a62fc | p@chr17:75581992..75582009, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr3:194214959..194214968,-#_ca12c114adef70dc180da6440e3ff8f4 | p@chr3:194214959..194214968, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr3:194214959..194214968,-#_ca12c114adef70dc180da6440e3ff8f4 | p@chr3:194214959..194214968, - |
| 9.91e-41 | FFCP PHASE1:Hg19::chr8:125193673..125193689,-#_e64105d6ad47eaf42cb7f0e583780acb | p@chr8:125193673..125193689, - |
| 9.91e-41 | FFCP PHASE1:Hg19::chr3:49139102..49139119,-#_e64105d6ad47eaf42cb7f0e583780acb | p@chr3:49139102..49139119, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr11:77282391..77282402,+#_e64105d6ad47eaf42cb7f0e583780acb | p@chr11:77282391..77282402, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr11:77282391..77282402,+#_e64105d6ad47eaf42cb7f0e583780acb | p@chr11:77282391..77282402, + |
