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{{UBERON
{{UBERON
|id=UBERON:0002105
|alt_id=UBERON:FMA_7192-MA_0002443
|name=vestibulo-auditory system
|namespace=
|def="A sensory system for the sense of hearing[WP]." [Wikipedia:Auditory_system]
|xref=AAO:0000631;;FMA:7192;;FMA:78500;;http://upload.wikimedia.org/wikipedia/commons/d/d2/Anatomy_of_the_Human_Ear.svg;;http://upload.wikimedia.org/wikipedia/commons/thumb/7/7c/HumanEar.jpg/200px-HumanEar.jpg;;MA:0002443;;ncithesaurus:Auditory_System;;NIF_GrossAnatomy:nlx_anat_090817;;OpenCyc:Mx4rvViwtJwpEbGdrcN5Y29ycA;;TAO:0001138;;XAO:0003195;;ZFA:0001138
|is_a=UBERON:0001032
|synonym="auditory organ system" EXACT [];;"auditory system" RELATED [];;"auditory/vestibular system" RELATED [];;"vestibuloauditory system" EXACT [];;"vestibuloauditory system" RELATED []
|comment=Auditory system is general anatomical term in FMA
|comment=Auditory system is general anatomical term in FMA
|alt_id=UBERON:FMA_7192-MA_0002443
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A sensory system for the sense of hearing[WP]." [Wikipedia:Auditory_system]
|subset=functional_classification;;uberon_slim;;vertebrate_core
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0002105
|is_a=UBERON:0001032
|is_obsolete=
|located_in=
|located_in=
|name=vestibulo-auditory system
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The sensory system used for balance and hearing.[AAO]" xsd:string
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The sensory system used for balance and hearing.[AAO]" xsd:string
|is_obsolete=
|subset=functional_classification;;uberon_slim;;vertebrate_core
|preceded_by=
|synonym="auditory organ system" EXACT [];;"auditory system" RELATED [];;"auditory/vestibular system" RELATED [];;"vestibuloauditory system" EXACT [];;"vestibuloauditory system" RELATED []
|union_of=
|xref=AAO:0000631;;FMA:7192;;FMA:78500;;http://upload.wikimedia.org/wikipedia/commons/d/d2/Anatomy_of_the_Human_Ear.svg;;http://upload.wikimedia.org/wikipedia/commons/thumb/7/7c/HumanEar.jpg/200px-HumanEar.jpg;;MA:0002443;;ncithesaurus:Auditory_System;;NIF_GrossAnatomy:nlx_anat_090817;;OpenCyc:Mx4rvViwtJwpEbGdrcN5Y29ycA;;TAO:0001138;;XAO:0003195;;ZFA:0001138
}}
}}

Revision as of 11:11, 12 September 2014

Name:vestibulo-auditory system
Definition:"A sensory system for the sense of hearing[WP]." [Wikipedia:Auditory_system]
Xrefs:
links:

AAO:0000631
FMA:7192
FMA:78500
[1]
[2]
MA:0002443
ncithesaurus:Auditory_System
NIF_GrossAnatomy:nlx_anat_090817
OpenCyc:Mx4rvViwtJwpEbGdrcN5Y29ycA
TAO:0001138
XAO:0003195

ZFA:0001138
Synonyms: "auditory organ system" EXACT []
"auditory system" RELATED []
"auditory/vestibular system" RELATED []
"vestibuloauditory system" EXACT []
"vestibuloauditory system" RELATED []
Comments:Auditory system is general anatomical term in FMA
Alt_id: UBERON:FMA_7192-MA_0002443
Subset: functional_classification
uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001032(sensory system)



Children

part of:UBERON:0001690 (ear),UBERON:0002827 (vestibulocochlear ganglion),UBERON:0004681 (vestibular system),UBERON:0016490 (auditory system)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 11959-126C6 (Neurons - spiral ganglion, pool1)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002105 (vestibulo-auditory system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_c61890a629f48235895cf0426ce3701cp@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_c61890a629f48235895cf0426ce3701cp@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_c61890a629f48235895cf0426ce3701cp@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_c61890a629f48235895cf0426ce3701cp@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_c61890a629f48235895cf0426ce3701cp3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_c61890a629f48235895cf0426ce3701cp@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_c61890a629f48235895cf0426ce3701cp2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_c61890a629f48235895cf0426ce3701cp@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_c61890a629f48235895cf0426ce3701cp10@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_c61890a629f48235895cf0426ce3701cp@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_c61890a629f48235895cf0426ce3701cp5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_c61890a629f48235895cf0426ce3701cp7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_c61890a629f48235895cf0426ce3701cp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_c61890a629f48235895cf0426ce3701cp@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_c61890a629f48235895cf0426ce3701cp7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_c61890a629f48235895cf0426ce3701cp@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_c61890a629f48235895cf0426ce3701cp3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_c61890a629f48235895cf0426ce3701cp@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_c61890a629f48235895cf0426ce3701cp@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_c61890a629f48235895cf0426ce3701cp@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_c61890a629f48235895cf0426ce3701cp@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_c61890a629f48235895cf0426ce3701cp7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_c61890a629f48235895cf0426ce3701cp2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_c61890a629f48235895cf0426ce3701cp6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_c61890a629f48235895cf0426ce3701cp2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_c61890a629f48235895cf0426ce3701cp3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_c61890a629f48235895cf0426ce3701cp@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_c61890a629f48235895cf0426ce3701cp@chr16:93971325..93971337, -
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_c61890a629f48235895cf0426ce3701cp@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_c61890a629f48235895cf0426ce3701cp@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_c61890a629f48235895cf0426ce3701cp6@Fam70b
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_c61890a629f48235895cf0426ce3701cp2@Strc
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_c61890a629f48235895cf0426ce3701cp@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_c61890a629f48235895cf0426ce3701cp9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_c61890a629f48235895cf0426ce3701cp@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_c61890a629f48235895cf0426ce3701cp1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_c61890a629f48235895cf0426ce3701cp@chr5:3909310..3909321, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_c61890a629f48235895cf0426ce3701cp@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_c61890a629f48235895cf0426ce3701cp@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_c61890a629f48235895cf0426ce3701cp4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_c61890a629f48235895cf0426ce3701cp@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_c61890a629f48235895cf0426ce3701cp@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_c61890a629f48235895cf0426ce3701cp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_c61890a629f48235895cf0426ce3701cp@chr1:182528388..182528403, +
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_c61890a629f48235895cf0426ce3701cp2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_c61890a629f48235895cf0426ce3701cp@chr11:4689776..4689785, -
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_c61890a629f48235895cf0426ce3701cp@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_c61890a629f48235895cf0426ce3701cp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_c61890a629f48235895cf0426ce3701cp13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_c61890a629f48235895cf0426ce3701cp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_c61890a629f48235895cf0426ce3701cp2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_c61890a629f48235895cf0426ce3701cp5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_c61890a629f48235895cf0426ce3701cp6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_c61890a629f48235895cf0426ce3701cp@chr17:13983198..13983203, +
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_c61890a629f48235895cf0426ce3701cp@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_c61890a629f48235895cf0426ce3701cp4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_c61890a629f48235895cf0426ce3701cp1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_c61890a629f48235895cf0426ce3701cp@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_c61890a629f48235895cf0426ce3701cp@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_c61890a629f48235895cf0426ce3701cp5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_c61890a629f48235895cf0426ce3701cp@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_c61890a629f48235895cf0426ce3701cp@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_c61890a629f48235895cf0426ce3701cp2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_c61890a629f48235895cf0426ce3701cp2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_c61890a629f48235895cf0426ce3701cp2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_c61890a629f48235895cf0426ce3701cp12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_c61890a629f48235895cf0426ce3701cp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_c61890a629f48235895cf0426ce3701cp4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_c61890a629f48235895cf0426ce3701cp@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_c61890a629f48235895cf0426ce3701cp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_c61890a629f48235895cf0426ce3701cp2@Otof
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_c61890a629f48235895cf0426ce3701cp@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_c61890a629f48235895cf0426ce3701cp3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_c61890a629f48235895cf0426ce3701cp@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_c61890a629f48235895cf0426ce3701cp@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_c61890a629f48235895cf0426ce3701cp@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_c61890a629f48235895cf0426ce3701cp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_c61890a629f48235895cf0426ce3701cp@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_c61890a629f48235895cf0426ce3701cp@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_c61890a629f48235895cf0426ce3701cp@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_c61890a629f48235895cf0426ce3701cp7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_c61890a629f48235895cf0426ce3701cp1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_c61890a629f48235895cf0426ce3701cp@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_c61890a629f48235895cf0426ce3701cp2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_c61890a629f48235895cf0426ce3701cp@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_c61890a629f48235895cf0426ce3701cp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_c61890a629f48235895cf0426ce3701cp@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_c61890a629f48235895cf0426ce3701cp4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_c61890a629f48235895cf0426ce3701cp3@Epyc
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_c61890a629f48235895cf0426ce3701cp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_c61890a629f48235895cf0426ce3701cp@chr13:78257518..78257522, +
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_c61890a629f48235895cf0426ce3701cp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_c61890a629f48235895cf0426ce3701cp3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_c61890a629f48235895cf0426ce3701cp@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_c61890a629f48235895cf0426ce3701cp11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_c61890a629f48235895cf0426ce3701cp@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_c61890a629f48235895cf0426ce3701cp@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_c61890a629f48235895cf0426ce3701cp@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_c61890a629f48235895cf0426ce3701cp1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_c61890a629f48235895cf0426ce3701cp@chr17:13983095..13983100, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "The sensory system used for balance and hearing.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0002105&oldid=3274052"