UBERON:0005173: Difference between revisions
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0002417 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:39, 27 June 2012
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005177(trunk region element) |
|---|---|
| part_of: | UBERON:0002417(abdominal segment of trunk) |
Children
| is a: | UBERON:0005172 (abdomen element),UBERON:0005179 (pelvis organ) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10081-102A9 (adrenal gland, adult, pool1)
- 10086-102B5 (liver, fetal, pool1)
- 10088-102B7
- 10089-102B8
- 10095-102C5
... further results Mouse (Mus musculus)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10081-102A9 (adrenal gland, adult, pool1)
- 10086-102B5 (liver, fetal, pool1)
- 10088-102B7
- 10089-102B8
- 10095-102C5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005173 (abdominal segment organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.35e-50 | FFCP PHASE2:Hg19::chr10:99344428..99344441,+#_86dd564ea8d55ac5f0b40153983079cf | p5@PI4K2A |
| 1.35e-50 | FFCP PHASE1:Hg19::chr10:99344428..99344441,+#_86dd564ea8d55ac5f0b40153983079cf | p5@PI4K2A |
| 7.25e-46 | FFCP PHASE2:Hg19::chr16:57831685..57831697,-#_017feb259afc1ab33cb6786f5dba248e | p7@KIFC3 |
| 7.25e-46 | FFCP PHASE1:Hg19::chr16:57831685..57831697,-#_017feb259afc1ab33cb6786f5dba248e | p7@KIFC3 |
| 6.78e-43 | FFCP PHASE2:Hg19::chr1:55331310..55331365,-#_d694e289ced9efc33f1a61ea4f768114 | p3@DHCR24 |
| 6.78e-43 | FFCP PHASE1:Hg19::chr1:55331310..55331365,-#_d694e289ced9efc33f1a61ea4f768114 | p3@DHCR24 |
| 1.49e-41 | FFCP PHASE2:Hg19::chr8:21911054..21911086,+#_ff3b82af486ea728765c4c11c60e8961 | p9@EPB49 |
| 1.49e-41 | FFCP PHASE1:Hg19::chr8:21911054..21911086,+#_ff3b82af486ea728765c4c11c60e8961 | p9@EPB49 |
| 5.67e-41 | FFCP PHASE1:Hg19::chr11:117695449..117695466,-#_67dbfc3eb155fefad275ec748ed61032 | p1@FXYD2 |
| 5.67e-41 | FFCP PHASE2:Hg19::chr11:117695449..117695466,-#_67dbfc3eb155fefad275ec748ed61032 | p1@FXYD2 |
| 7.6e-41 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15608615915c45c50172eb37f4002107 | p4@PAX2 |
| 7.6e-41 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15608615915c45c50172eb37f4002107 | p4@PAX2 |
| 7.31e-40 | FFCP PHASE2:Mm9::chr4:95246108..95246119,+#_3027e523e694847a5774fa8dc0818437 | p4@Fggy |
| 7.31e-40 | FFCP PHASE1:Mm9::chr4:95246108..95246119,+#_3027e523e694847a5774fa8dc0818437 | p4@Fggy |
| 3.21e-39 | FFCP PHASE2:Mm9::chr12:58298278..58298292,-#_99ab3c9bf124f8f8aee7925a4072b218 | p4@Slc25a21 |
| 3.21e-39 | FFCP PHASE1:Mm9::chr12:58298278..58298292,-#_99ab3c9bf124f8f8aee7925a4072b218 | p4@Slc25a21 |
| 1.15e-38 | FFCP PHASE2:Mm9::chr12:58298298..58298317,-#_4fc2bfa8e32a014341bc59330caa7d98 | p3@Slc25a21 |
| 1.15e-38 | FFCP PHASE1:Mm9::chr12:58298298..58298317,-#_4fc2bfa8e32a014341bc59330caa7d98 | p3@Slc25a21 |
| 4.6e-38 | FFCP PHASE2:Mm9::chr12:58298249..58298262,-#_442ebb5719b7c7c48eb431a4e981339f | p5@Slc25a21 |
| 4.6e-38 | FFCP PHASE1:Mm9::chr12:58298249..58298262,-#_442ebb5719b7c7c48eb431a4e981339f | p5@Slc25a21 |
| 4.65e-37 | FFCP PHASE1:Mm9::chr4:129255765..129255776,-#_438b73844bc86bb32a6547f6db7ebe08 | p2@Fam167b |
| 4.65e-37 | FFCP PHASE2:Mm9::chr4:129255765..129255776,-#_438b73844bc86bb32a6547f6db7ebe08 | p2@Fam167b |
| 4.76e-37 | FFCP PHASE1:Hg19::chr20:42187656..42187673,+#_93f08b56dc41fb4999c298ffbd33bbe1 | p2@SGK2 |
| 4.76e-37 | FFCP PHASE2:Hg19::chr20:42187656..42187673,+#_93f08b56dc41fb4999c298ffbd33bbe1 | p2@SGK2 |
| 3.18e-36 | FFCP PHASE2:Hg19::chr7:44580918..44580934,-#_bc5b887c20b4017888dc35ea4ccf20e9 | p2@NPC1L1 |
| 3.18e-36 | FFCP PHASE1:Hg19::chr7:44580918..44580934,-#_bc5b887c20b4017888dc35ea4ccf20e9 | p2@NPC1L1 |
| 5.26e-36 | FFCP PHASE2:Hg19::chr7:44580861..44580912,-#_b2bcee6860984dae306663cc463b8681 | p1@NPC1L1 |
| 5.26e-36 | FFCP PHASE1:Hg19::chr7:44580861..44580912,-#_b2bcee6860984dae306663cc463b8681 | p1@NPC1L1 |
| 8.22e-36 | FFCP PHASE2:Mm9::chr6:34129226..34129246,+#_f17a052c9b235a2a6c76ba9e429ec045 | p2@ENSMUST00000145644 |
| 8.22e-36 | FFCP PHASE1:Mm9::chr6:34129226..34129246,+#_f17a052c9b235a2a6c76ba9e429ec045 | p2@ENSMUST00000145644 |
| 1.41e-35 | FFCP PHASE2:Mm9::chr10:58904532..58904548,-#_f285f581e5427ee59b3507e13d420e41 | p3@Oit3 |
| 1.41e-35 | FFCP PHASE1:Mm9::chr10:58904532..58904548,-#_f285f581e5427ee59b3507e13d420e41 | p3@Oit3 |
| 1.53e-35 | FFCP PHASE2:Mm9::chr8:73247943..73247958,+#_a1036c562fd771af27d38da20fc96c93 | p3@Pde4c |
| 1.53e-35 | FFCP PHASE1:Mm9::chr8:73247943..73247958,+#_a1036c562fd771af27d38da20fc96c93 | p3@Pde4c |
| 3.31e-35 | FFCP PHASE2:Mm9::chr9:44611035..44611044,-#_613238fe122788311ab131762e91bbc1 | p4@Ttc36 |
| 3.31e-35 | FFCP PHASE1:Mm9::chr9:44611035..44611044,-#_613238fe122788311ab131762e91bbc1 | p4@Ttc36 |
| 4.76e-35 | FFCP PHASE2:Hg19::chr4:155484103..155484147,+#_a1fe882a264504cd99d1b59da4c0d2c9 | p2@FGB |
| 4.76e-35 | FFCP PHASE1:Hg19::chr4:155484103..155484147,+#_a1fe882a264504cd99d1b59da4c0d2c9 | p2@FGB |
| 8.38e-35 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_1e464572511a62b6d721b75bde669e73 | p7@HOXA10 |
| 8.38e-35 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_1e464572511a62b6d721b75bde669e73 | p7@HOXA10 |
| 1.64e-34 | FFCP PHASE2:Mm9::chr19:12707997..12708015,+#_ca94349abf2227bf6582dac42defd009 | p1@Glyat |
| 1.64e-34 | FFCP PHASE1:Mm9::chr19:12707997..12708015,+#_ca94349abf2227bf6582dac42defd009 | p1@Glyat |
| 2.61e-34 | FFCP PHASE1:Mm9::chr11:60622345..60622377,-#_06e6af036d5996fd0bc79aad16b8b2da | p@chr11:60622345..60622377, - |
| 2.61e-34 | FFCP PHASE1:Hg19::chr19:1826957..1826984,-#_cb2e46c4517836596a7ed3fca76a9eca | p@chr19:1826957..1826984, - |
| 2.61e-34 | FFCP PHASE2:Hg19::chr19:1826957..1826984,-#_cb2e46c4517836596a7ed3fca76a9eca | p@chr19:1826957..1826984, - |
| 2.61e-34 | FFCP PHASE2:Mm9::chr11:60622345..60622377,-#_06e6af036d5996fd0bc79aad16b8b2da | p@chr11:60622345..60622377, - |
| 3.01e-34 | FFCP PHASE1:Hg19::chr7:5461523..5461542,-#_511bd39dd8a3de933552b14d3eb6f696 | p7@TNRC18 |
| 3.01e-34 | FFCP PHASE2:Hg19::chr7:5461523..5461542,-#_511bd39dd8a3de933552b14d3eb6f696 | p7@TNRC18 |
| 3.02e-34 | FFCP PHASE2:Hg19::chr2:74669504..74669520,-#_5f71a4d570f7dbb06760deee6b84e79d | p9@RTKN |
| 3.02e-34 | FFCP PHASE1:Hg19::chr2:74669504..74669520,-#_5f71a4d570f7dbb06760deee6b84e79d | p9@RTKN |
| 5.07e-34 | FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_cfeacb19d021448e8e0e4825ae06541e | p1@ENST00000418041, p1@ENST00000443104 |
| 5.07e-34 | FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_cfeacb19d021448e8e0e4825ae06541e | p1@ENST00000418041, p1@ENST00000443104 |
| 5.11e-34 | FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_b947e23306c2c80e158af6fdfd84640c | p5@NR1H4 |
| 5.11e-34 | FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_b947e23306c2c80e158af6fdfd84640c | p5@NR1H4 |
| 8.0e-34 | FFCP PHASE2:Mm9::chr11:7097807..7097814,+#_a1d412446a937a05ba807db65bd5f83a | p2@Igfbp1 |
| 8.0e-34 | FFCP PHASE1:Mm9::chr11:7097807..7097814,+#_a1d412446a937a05ba807db65bd5f83a | p2@Igfbp1 |
| 1.07e-33 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e8d9e0377ff6ab05e7bd9de0edbcc33c | p3@PAX2 |
| 1.07e-33 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e8d9e0377ff6ab05e7bd9de0edbcc33c | p3@PAX2 |
| 1.27e-33 | FFCP PHASE2:Mm9::chr13:23931270..23931311,+#_bcd8572cec907240149495e67bd1503a | p2@Slc17a3 |
| 1.27e-33 | FFCP PHASE1:Mm9::chr13:23931270..23931311,+#_bcd8572cec907240149495e67bd1503a | p2@Slc17a3 |
| 1.4e-33 | FFCP PHASE1:Mm9::chr4:95246137..95246153,+#_e12a6b1e47eea779b493336131755922 | p3@Fggy |
| 1.4e-33 | FFCP PHASE2:Mm9::chr4:95246137..95246153,+#_e12a6b1e47eea779b493336131755922 | p3@Fggy |
| 1.76e-33 | FFCP PHASE2:Mm9::chr16:37621995..37622022,-#_701be2cbe0c43deac14aff16d9714848 | p@chr16:37621995..37622022, - |
| 1.76e-33 | FFCP PHASE1:Mm9::chr16:37621995..37622022,-#_701be2cbe0c43deac14aff16d9714848 | p@chr16:37621995..37622022, - |
| 1.77e-33 | FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_c07d00a7112d6bd1377429c5c4f19492 | p@chr18:3456189..3456200, + |
| 1.77e-33 | FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_c07d00a7112d6bd1377429c5c4f19492 | p@chr18:3456189..3456200, + |
| 2.2e-33 | FFCP PHASE1:Mm9::chr4:96330769..96330789,-#_089a63df740efdeae0d8ddcd7c257a30 | p2@Cyp2j5 |
| 2.2e-33 | FFCP PHASE2:Mm9::chr4:96330769..96330789,-#_089a63df740efdeae0d8ddcd7c257a30 | p2@Cyp2j5 |
| 2.92e-33 | FFCP PHASE1:Mm9::chr13:23931467..23931489,+#_899e01772011c7a7899ec8fb19e18c5c | p3@Slc17a3 |
| 2.92e-33 | FFCP PHASE2:Mm9::chr13:23931467..23931489,+#_899e01772011c7a7899ec8fb19e18c5c | p3@Slc17a3 |
| 5.26e-33 | FFCP PHASE2:Mm9::chr16:37580223..37580237,+#_ae1b69f12832a29c82f24601e289d7b1 | p4@Hgd |
| 5.26e-33 | FFCP PHASE1:Mm9::chr16:37580223..37580237,+#_ae1b69f12832a29c82f24601e289d7b1 | p4@Hgd |
| 5.56e-33 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_a03063de67d67c25d09a6a90c4b77d2f | p@chr2:693380..693398, + |
| 5.56e-33 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_a03063de67d67c25d09a6a90c4b77d2f | p@chr2:693380..693398, + |
| 8.68e-33 | FFCP PHASE2:Mm9::chr1:141398256..141398267,+#_c833dce94356d213085b2a8098b7c44b | p3@F13b |
| 8.68e-33 | FFCP PHASE1:Mm9::chr1:141398256..141398267,+#_c833dce94356d213085b2a8098b7c44b | p3@F13b |
| 1.09e-32 | FFCP PHASE2:Hg19::chr20:10349456..10349475,-#_8ff08c3c974d857352b1d6a0c83c1d40 | p1@ENST00000421143 |
| 1.09e-32 | FFCP PHASE1:Hg19::chr20:10349456..10349475,-#_8ff08c3c974d857352b1d6a0c83c1d40 | p1@ENST00000421143 |
| 1.21e-32 | FFCP PHASE2:Mm9::chr15:82624876..82624892,-#_b8adf557aa538e9eafa4ba91690ea217 | p5@Cyp2d26 |
| 1.21e-32 | FFCP PHASE1:Mm9::chr15:82624876..82624892,-#_b8adf557aa538e9eafa4ba91690ea217 | p5@Cyp2d26 |
| 1.25e-32 | FFCP PHASE2:Mm9::chr10:95305558..95305580,-#_39699f7b134434ff80e6c373c9733827 | p@chr10:95305558..95305580, - |
| 1.25e-32 | FFCP PHASE1:Mm9::chr10:95305558..95305580,-#_39699f7b134434ff80e6c373c9733827 | p@chr10:95305558..95305580, - |
| 1.68e-32 | FFCP PHASE1:Mm9::chr9:44609886..44609901,-#_03c0c247375d6c9e149709ef6f7fd201 | p@chr9:44609886..44609901, - |
| 1.68e-32 | FFCP PHASE2:Mm9::chr9:44609886..44609901,-#_03c0c247375d6c9e149709ef6f7fd201 | p@chr9:44609886..44609901, - |
| 1.75e-32 | FFCP PHASE2:Mm9::chr16:37580298..37580310,+#_7fa7cc74821320a73afcdfe977a3dfc6 | p3@Hgd |
| 1.75e-32 | FFCP PHASE1:Mm9::chr16:37580298..37580310,+#_7fa7cc74821320a73afcdfe977a3dfc6 | p3@Hgd |
| 2.0e-32 | FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_9541d4effc6617c5270bb4845096eab8 | p2@PAX2 |
| 2.0e-32 | FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_9541d4effc6617c5270bb4845096eab8 | p2@PAX2 |
| 2.22e-32 | FFCP PHASE1:Hg19::chr12:100867695..100867706,+#_e2bfd428f89bc1afb2609562b7a528c3 | p6@NR1H4 |
| 2.22e-32 | FFCP PHASE2:Hg19::chr12:100867695..100867706,+#_e2bfd428f89bc1afb2609562b7a528c3 | p6@NR1H4 |
| 2.68e-32 | FFCP PHASE1:Mm9::chr15:9265320..9265378,+#_a7bcce956a5cc94bf0090d625fb38392 | p1@Ugt3a2 |
| 2.68e-32 | FFCP PHASE2:Mm9::chr15:9265320..9265378,+#_a7bcce956a5cc94bf0090d625fb38392 | p1@Ugt3a2 |
| 3.54e-32 | FFCP PHASE2:Mm9::chr4:150283537..150283568,-#_cd3b966b279a00e69febd531048c4ba5 | p5@Park7 |
| 3.54e-32 | FFCP PHASE1:Mm9::chr4:150283537..150283568,-#_cd3b966b279a00e69febd531048c4ba5 | p5@Park7 |
| 3.97e-32 | FFCP PHASE2:Mm9::chr9:44609861..44609874,-#_738f14e54c258ce8124e5ba8dd241d32 | p@chr9:44609861..44609874, - |
| 3.97e-32 | FFCP PHASE1:Mm9::chr9:44609861..44609874,-#_738f14e54c258ce8124e5ba8dd241d32 | p@chr9:44609861..44609874, - |
| 4.46e-32 | FFCP PHASE2:Hg19::chr15:58724170..58724183,+#_968e386f10d00568b5174a51544558b4 | p3@LIPC |
| 4.46e-32 | FFCP PHASE1:Hg19::chr15:58724170..58724183,+#_968e386f10d00568b5174a51544558b4 | p3@LIPC |
| 4.57e-32 | FFCP PHASE1:Hg19::chr15:58724184..58724197,+#_1cc9645ebb33b54353c1a5b9b00f414e | p2@LIPC |
| 4.57e-32 | FFCP PHASE2:Hg19::chr15:58724184..58724197,+#_1cc9645ebb33b54353c1a5b9b00f414e | p2@LIPC |
