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{{UBERON
{{UBERON
|id=UBERON:0007297
|alt_id=
|name=presumptive pronephric mesoderm
|namespace=
|def=
|xref=EFO:0003619;;TAO:0001070;;ZFA:0001070
|is_a=UBERON:0006598
|synonym="nephron primordium" EXACT [ZFA:0001070]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0007297
|is_a=UBERON:0006598
|is_obsolete=
|located_in=
|located_in=
|name=presumptive pronephric mesoderm
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="nephron primordium" EXACT [ZFA:0001070]
|union_of=
|xref=EFO:0003619;;TAO:0001070;;ZFA:0001070
}}
}}

Revision as of 11:43, 12 September 2014

Name:presumptive pronephric mesoderm
Xrefs:
links:

EFO:0003619
TAO:0001070

ZFA:0001070
Synonyms: "nephron primordium" EXACT [ZFA:0001070]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0006598(presumptive structure)



Children

develops from:UBERON:0005721 (pronephric mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007297 (presumptive pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
4.54e-44FFCP PHASE1:Mm9::chr7:151927980..151927988,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr7:151927980..151927988, +
4.54e-44FFCP PHASE1:Mm9::chr5:120078716..120078763,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:120078716..120078763, -
4.54e-44FFCP PHASE2:Mm9::chr2:158083973..158083982,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Bpi
4.54e-44FFCP PHASE1:Mm9::chr3:103650730..103650741,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr3:103650730..103650741, +
4.54e-44FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:43367743..43367754, -
4.54e-44FFCP PHASE2:Mm9::chr15:75304916..75304925,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:75304916..75304925, +
4.54e-44FFCP PHASE2:Mm9::chr9:56469136..56469145,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:56469136..56469145, -
4.54e-44FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379972..31379981, +
4.54e-44FFCP PHASE1:Mm9::chr2:25677632..25677636,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:25677632..25677636, -
4.54e-44FFCP PHASE2:Mm9::chr8:19142604..19142612,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:19142604..19142612, +
4.54e-44FFCP PHASE2:Mm9::chr5:75559819..75559830,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:75559819..75559830, +
4.54e-44FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr3:65253465..65253475, +
4.54e-44FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr18:62775330..62775347, -
4.54e-44FFCP PHASE2:Mm9::chr2:148625223..148625234,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:148625223..148625234, +
4.54e-44FFCP PHASE1:Mm9::chr12:110132148..110132154,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Wdr25
4.54e-44FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:43367743..43367754, -
4.54e-44FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr6:118298429..118298448, +
4.54e-44FFCP PHASE1:Mm9::chr16:23308115..23308126,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr16:23308115..23308126, +
4.54e-44FFCP PHASE1:Mm9::chr14:67453354..67453365,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr14:67453354..67453365, -
4.54e-44FFCP PHASE1:Mm9::chr11:101959282..101959299,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:101959282..101959299, -
4.54e-44FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p4@Ido1
4.54e-44FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@Gm6792
4.54e-44FFCP PHASE2:Mm9::chrX:75798114..75798125,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:75798114..75798125, -
4.54e-44FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr18:74784728..74784738, +
4.54e-44FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr6:147624258..147624285, -
4.54e-44FFCP PHASE1:Mm9::chr11:98567868..98567884,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p5@Med24
4.54e-44FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@uc007mmw.1
4.54e-44FFCP PHASE1:Mm9::chr8:19141429..19141440,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:19141429..19141440, +
4.54e-44FFCP PHASE1:Mm9::chr5:31379377..31379384,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379377..31379384, +
4.54e-44FFCP PHASE1:Mm9::chr14:52542711..52542716,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@Rnase13
4.54e-44FFCP PHASE1:Mm9::chr13:21379261..21379264,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379261..21379264, -
4.54e-44FFCP PHASE2:Mm9::chr1:89597725..89597743,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:89597725..89597743, +
4.54e-44FFCP PHASE2:Mm9::chr13:21378774..21378782,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21378774..21378782, -
4.54e-44FFCP PHASE2:Mm9::chr5:31379437..31379448,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379437..31379448, +
4.54e-44FFCP PHASE1:Mm9::chr17:24670830..24670845,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr17:24670830..24670845, +
4.54e-44FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:10488683..10488691, +
4.54e-44FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1
4.54e-44FFCP PHASE1:Mm9::chrX:20422498..20422506,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:20422498..20422506, +
4.54e-44FFCP PHASE1:Mm9::chr7:65995799..65995810,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr7:65995799..65995810, -
4.54e-44FFCP PHASE1:Mm9::chr2:164479326..164479336,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:164479326..164479336, +
4.54e-44FFCP PHASE2:Mm9::chr15:72756032..72756041,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:72756032..72756041, -
4.54e-44FFCP PHASE2:Mm9::chr11:105798218..105798228,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:105798218..105798228, -
4.54e-44FFCP PHASE1:Mm9::chr5:110773795..110773801,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:110773795..110773801, +
4.54e-44FFCP PHASE1:Mm9::chr1:18213651..18213663,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p1@Defb44-ps
4.54e-44FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:96150839..96150842, -
4.54e-44FFCP PHASE2:Mm9::chrX:20219008..20219045,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:20219008..20219045, +
4.54e-44FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Glb1l2
4.54e-44FFCP PHASE1:Mm9::chr7:25565920..25565950,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr7:25565920..25565950, -
4.54e-44FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:35930667..35930691, +
4.54e-44FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379065..21379072, -
4.54e-44FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:160347529..160347538, +
4.54e-44FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr17:35249011..35249020, -
4.54e-44FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p11@P4ha2
4.54e-44FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:160347529..160347538, +
4.54e-44FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p4@Ido1
4.54e-44FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:90155722..90155743, +
4.54e-44FFCP PHASE1:Mm9::chr11:63779573..63779582,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:63779573..63779582, +
4.54e-44FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr10:91753336..91753348, -
4.54e-44FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379125..21379144, -
4.54e-44FFCP PHASE1:Mm9::chr9:65941913..65941923,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:65941913..65941923, -
4.54e-44FFCP PHASE1:Mm9::chr9:26688157..26688159,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:26688157..26688159, -
4.54e-44FFCP PHASE2:Mm9::chr14:63611303..63611312,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr14:63611303..63611312, +

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