Personal tools

UBERON:0010349: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0010349 |name=otic capsule pre-cartilage condensation |namespace= |def= |xref=EHDAA2:0000833 |is_a=UBERON:0004121;;UBERON:0005866;;UBERON:0007524;;UB...")
 
No edit summary
 
Line 18: Line 18:
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=
|part_of=UBERON:0001846
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Latest revision as of 13:45, 27 June 2012

Name:otic capsule pre-cartilage condensation
Xrefs:
links:
EHDAA2:0000833
Synonyms: "otic capsule anlage" EXACT []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004121(ectoderm-derived structure),UBERON:0005866(pre-cartilage condensation),UBERON:0007524(dense mesenchyme tissue),UBERON:0010314(structure with developmental contribution from neural crest)
part_of:UBERON:0001846(internal ear)



Children

develops from:UBERON:0010351 (otic capsule cartilage condensation)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010349 (otic capsule pre-cartilage condensation), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_7aa17a5425575aeb4a7514aab938a103p@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:85334335..85334353, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_7aa17a5425575aeb4a7514aab938a103p5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_7aa17a5425575aeb4a7514aab938a103p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_7aa17a5425575aeb4a7514aab938a103p4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_7aa17a5425575aeb4a7514aab938a103p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_7aa17a5425575aeb4a7514aab938a103p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_7aa17a5425575aeb4a7514aab938a103p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_7aa17a5425575aeb4a7514aab938a103p3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_7aa17a5425575aeb4a7514aab938a103p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_7aa17a5425575aeb4a7514aab938a103p1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_7aa17a5425575aeb4a7514aab938a103p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_7aa17a5425575aeb4a7514aab938a103p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_7aa17a5425575aeb4a7514aab938a103p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_7aa17a5425575aeb4a7514aab938a103p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_7aa17a5425575aeb4a7514aab938a103p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_7aa17a5425575aeb4a7514aab938a103p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_7aa17a5425575aeb4a7514aab938a103p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_7aa17a5425575aeb4a7514aab938a103p1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_7aa17a5425575aeb4a7514aab938a103p9@Otof
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_7aa17a5425575aeb4a7514aab938a103p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_7aa17a5425575aeb4a7514aab938a103p@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_7aa17a5425575aeb4a7514aab938a103p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_7aa17a5425575aeb4a7514aab938a103p@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_7aa17a5425575aeb4a7514aab938a103p@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_7aa17a5425575aeb4a7514aab938a103p2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_7aa17a5425575aeb4a7514aab938a103p3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_7aa17a5425575aeb4a7514aab938a103p7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_7aa17a5425575aeb4a7514aab938a103p@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_7aa17a5425575aeb4a7514aab938a103p1@Kcna10
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_7aa17a5425575aeb4a7514aab938a103p3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_7aa17a5425575aeb4a7514aab938a103p@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_7aa17a5425575aeb4a7514aab938a103p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_7aa17a5425575aeb4a7514aab938a103p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_7aa17a5425575aeb4a7514aab938a103p@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_7aa17a5425575aeb4a7514aab938a103p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_7aa17a5425575aeb4a7514aab938a103p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_7aa17a5425575aeb4a7514aab938a103p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_7aa17a5425575aeb4a7514aab938a103p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_7aa17a5425575aeb4a7514aab938a103p2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_7aa17a5425575aeb4a7514aab938a103p@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_7aa17a5425575aeb4a7514aab938a103p@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_7aa17a5425575aeb4a7514aab938a103p@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_7aa17a5425575aeb4a7514aab938a103p@chr9:42206730..42206739, -
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_7aa17a5425575aeb4a7514aab938a103p2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_7aa17a5425575aeb4a7514aab938a103p@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_7aa17a5425575aeb4a7514aab938a103p@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_7aa17a5425575aeb4a7514aab938a103p1@Strc
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_7aa17a5425575aeb4a7514aab938a103p2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_7aa17a5425575aeb4a7514aab938a103p@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_7aa17a5425575aeb4a7514aab938a103p@chr3:154459246..154459253, +
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_7aa17a5425575aeb4a7514aab938a103p4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_7aa17a5425575aeb4a7514aab938a103p4@Tecta
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_7aa17a5425575aeb4a7514aab938a103p1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_7aa17a5425575aeb4a7514aab938a103p@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_7aa17a5425575aeb4a7514aab938a103p4@Kncn
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_7aa17a5425575aeb4a7514aab938a103p@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_7aa17a5425575aeb4a7514aab938a103p@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_7aa17a5425575aeb4a7514aab938a103p@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_7aa17a5425575aeb4a7514aab938a103p@chr18:38104702..38104718, -
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_7aa17a5425575aeb4a7514aab938a103p@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_7aa17a5425575aeb4a7514aab938a103p@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_7aa17a5425575aeb4a7514aab938a103p@chr5:150945209..150945220, +
1.87e-86FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_7aa17a5425575aeb4a7514aab938a103p@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_7aa17a5425575aeb4a7514aab938a103p@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_7aa17a5425575aeb4a7514aab938a103p7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_7aa17a5425575aeb4a7514aab938a103p@chr1:43454162..43454170, -
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_7aa17a5425575aeb4a7514aab938a103p21@Espn
1.87e-86FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_7aa17a5425575aeb4a7514aab938a103p5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_7aa17a5425575aeb4a7514aab938a103p1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_7aa17a5425575aeb4a7514aab938a103p@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_7aa17a5425575aeb4a7514aab938a103p4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_7aa17a5425575aeb4a7514aab938a103p5@Fer1l6
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_7aa17a5425575aeb4a7514aab938a103p4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_7aa17a5425575aeb4a7514aab938a103p@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_7aa17a5425575aeb4a7514aab938a103p@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_7aa17a5425575aeb4a7514aab938a103p@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_7aa17a5425575aeb4a7514aab938a103p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_7aa17a5425575aeb4a7514aab938a103p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_7aa17a5425575aeb4a7514aab938a103p@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_7aa17a5425575aeb4a7514aab938a103p@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_7aa17a5425575aeb4a7514aab938a103p1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_7aa17a5425575aeb4a7514aab938a103p@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_7aa17a5425575aeb4a7514aab938a103p@chr15:103146966..103146971, -
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_7aa17a5425575aeb4a7514aab938a103p@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_7aa17a5425575aeb4a7514aab938a103p@chr19:55256373..55256384, +
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_7aa17a5425575aeb4a7514aab938a103p2@Plscr5
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_7aa17a5425575aeb4a7514aab938a103p@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_7aa17a5425575aeb4a7514aab938a103p@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_7aa17a5425575aeb4a7514aab938a103p@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_7aa17a5425575aeb4a7514aab938a103p@chr15:89215306..89215315, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_7aa17a5425575aeb4a7514aab938a103p3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_7aa17a5425575aeb4a7514aab938a103p@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_7aa17a5425575aeb4a7514aab938a103p@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_7aa17a5425575aeb4a7514aab938a103p@chr16:93971325..93971337, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_7aa17a5425575aeb4a7514aab938a103p@chr1:93235253..93235264, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0010349&oldid=1838119"