CL:0000677: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="Cell of the intestinal epithelium with a brush border made up of many parallel packed microvilli; associated with absorption, particularly of macromolecules." [JB:jb] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000677 | |||
|is_a=CL:0000212 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=gut absorptive cell | |||
|namespace=cell | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Revision as of 10:19, 12 September 2014
| Name: | gut absorptive cell |
|---|---|
| Namespace: | cell |
| Definition: | "Cell of the intestinal epithelium with a brush border made up of many parallel packed microvilli; associated with absorption, particularly of macromolecules." [JB:jb] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000212(absorptive cell) |
|---|
Children
| is a: | CL:0000584 (enterocyte) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11848-124I3 (CD326+ enterocyte, pool1)
- 11849-124I4 (CD326+ enterocyte, pool2)
- 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
- 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
- 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
- 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)
Mouse (Mus musculus)
- 11848-124I3 (CD326+ enterocyte, pool1)
- 11849-124I4 (CD326+ enterocyte, pool2)
- 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
- 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
- 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
- 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000677 (gut absorptive cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.74e-65 | FFCP PHASE2:Mm9::chr9:50547790..50547793,+#_7ec39593027fee3c99194747b337bce3 | p@chr9:50547790..50547793, + |
| 3.74e-65 | FFCP PHASE1:Mm9::chr9:50547790..50547793,+#_7ec39593027fee3c99194747b337bce3 | p@chr9:50547790..50547793, + |
| 6.21e-65 | FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_bdf0c31b410eeb6de7284c8e455b7e2d | p@chr8:122335239..122335244, + |
| 6.21e-65 | FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_bdf0c31b410eeb6de7284c8e455b7e2d | p@chr8:122335239..122335244, + |
| 2.15e-58 | FFCP PHASE2:Mm9::chr12:79850576..79850587,-#_edb4888f9c8ed913da6650546b24519b | p@chr12:79850576..79850587, - |
| 2.15e-58 | FFCP PHASE1:Mm9::chr12:79850576..79850587,-#_edb4888f9c8ed913da6650546b24519b | p@chr12:79850576..79850587, - |
| 2.15e-58 | FFCP PHASE2:Mm9::chr4:141179191..141179200,+#_edb4888f9c8ed913da6650546b24519b | p@chr4:141179191..141179200, + |
| 2.15e-58 | FFCP PHASE1:Mm9::chr4:141179191..141179200,+#_edb4888f9c8ed913da6650546b24519b | p@chr4:141179191..141179200, + |
| 3.91e-58 | FFCP PHASE2:Mm9::chr12:40668168..40668171,+#_f12b9d533ce0eb5fed9a553374dac596 | p@chr12:40668168..40668171, + |
| 3.91e-58 | FFCP PHASE1:Mm9::chr12:40668168..40668171,+#_f12b9d533ce0eb5fed9a553374dac596 | p@chr12:40668168..40668171, + |
| 3.91e-58 | FFCP PHASE1:Mm9::chr15:84503292..84503296,+#_f12b9d533ce0eb5fed9a553374dac596 | p@chr15:84503292..84503296, + |
| 3.91e-58 | FFCP PHASE2:Mm9::chr15:84503292..84503296,+#_f12b9d533ce0eb5fed9a553374dac596 | p@chr15:84503292..84503296, + |
| 1.25e-52 | FFCP PHASE2:Mm9::chr2:33323607..33323635,+#_be8016c3232035d9f3aabad17a81de86 | p@chr2:33323607..33323635, + |
| 1.25e-52 | FFCP PHASE1:Mm9::chr2:33323607..33323635,+#_be8016c3232035d9f3aabad17a81de86 | p@chr2:33323607..33323635, + |
| 2.53e-52 | FFCP PHASE2:Mm9::chr8:107365938..107365944,+#_ceca857720599b3b369d1a5fa723bf48 | p@chr8:107365938..107365944, + |
| 2.53e-52 | FFCP PHASE1:Mm9::chr8:107365938..107365944,+#_ceca857720599b3b369d1a5fa723bf48 | p@chr8:107365938..107365944, + |
| 3.23e-52 | FFCP PHASE2:Mm9::chr3:104598813..104598825,+#_6a12224c23c55bfbedc8592b3e9ec37a | p@chr3:104598813..104598825, + |
| 3.23e-52 | FFCP PHASE1:Mm9::chr3:104598813..104598825,+#_6a12224c23c55bfbedc8592b3e9ec37a | p@chr3:104598813..104598825, + |
| 4.11e-52 | FFCP PHASE2:Mm9::chr8:125098705..125098710,+#_1514b2d12d49748824c8204584f82d6a | p@chr8:125098705..125098710, + |
| 4.11e-52 | FFCP PHASE1:Mm9::chr8:125098705..125098710,+#_1514b2d12d49748824c8204584f82d6a | p@chr8:125098705..125098710, + |
| 5.18e-52 | FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_c6980022756d89bfb0e86a3ffab6bd6b | p@chr5:135465906..135465912, + |
| 5.18e-52 | FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_c6980022756d89bfb0e86a3ffab6bd6b | p@chr5:135465906..135465912, + |
| 2.22e-51 | FFCP PHASE2:Mm9::chr9:84127758..84127761,+#_c558d18c08ec4e4e01a03a0d08c05917 | p@chr9:84127758..84127761, + |
| 2.22e-51 | FFCP PHASE1:Mm9::chr9:84127758..84127761,+#_c558d18c08ec4e4e01a03a0d08c05917 | p@chr9:84127758..84127761, + |
| 8.37e-49 | FFCP PHASE2:Mm9::chr5:64219055..64219063,-#_63e96d718ed60e01b10c1478015f7dbf | p@chr5:64219055..64219063, - |
| 8.37e-49 | FFCP PHASE1:Mm9::chr5:64219055..64219063,-#_63e96d718ed60e01b10c1478015f7dbf | p@chr5:64219055..64219063, - |
| 2.57e-48 | FFCP PHASE2:Mm9::chr15:82182200..82182204,+#_388285c72081ce975bbf3c02256cd24b | p@chr15:82182200..82182204, + |
| 2.57e-48 | FFCP PHASE1:Mm9::chr15:82182200..82182204,+#_388285c72081ce975bbf3c02256cd24b | p@chr15:82182200..82182204, + |
| 4.49e-48 | FFCP PHASE1:Mm9::chr9:46051244..46051255,+#_50a73e48d6dec4278ec1ca15858ce648 | p@chr9:46051244..46051255, + |
| 4.49e-48 | FFCP PHASE2:Mm9::chr9:46051244..46051255,+#_50a73e48d6dec4278ec1ca15858ce648 | p@chr9:46051244..46051255, + |
| 5.4e-48 | FFCP PHASE2:Mm9::chr1:156931282..156931291,-#_79f1d00458d91d0fc694019a2589a397 | p@chr1:156931282..156931291, - |
| 5.4e-48 | FFCP PHASE1:Mm9::chr1:156931282..156931291,-#_79f1d00458d91d0fc694019a2589a397 | p@chr1:156931282..156931291, - |
| 6.51e-48 | FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_8a8c7b52963e9ff59c3b04c7b0130088 | p@chr17:57201412..57201418, - |
| 6.51e-48 | FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_8a8c7b52963e9ff59c3b04c7b0130088 | p@chr17:57201412..57201418, - |
| 1.37e-47 | FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_09929ae765f9d0310ad602b19a0c633d | p@chr17:46693370..46693378, + |
| 1.37e-47 | FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_09929ae765f9d0310ad602b19a0c633d | p@chr17:46693370..46693378, + |
| 6.34e-47 | FFCP PHASE1:Mm9::chr1:13659869..13659873,-#_8d09444007166f100819c1041f306350 | p@chr1:13659869..13659873, - |
| 6.34e-47 | FFCP PHASE1:Mm9::chr2:76337146..76337155,+#_8d09444007166f100819c1041f306350 | p5@Osbpl6 |
| 6.34e-47 | FFCP PHASE1:Mm9::chr14:26286217..26286232,+#_8d09444007166f100819c1041f306350 | p@chr14:26286217..26286232, + |
| 6.34e-47 | FFCP PHASE1:Mm9::chr6:137486449..137486455,+#_8d09444007166f100819c1041f306350 | p@chr6:137486449..137486455, + |
| 6.34e-47 | FFCP PHASE2:Mm9::chr2:76337146..76337155,+#_8d09444007166f100819c1041f306350 | p5@Osbpl6 |
| 6.34e-47 | FFCP PHASE2:Mm9::chr2:24234641..24234644,+#_8d09444007166f100819c1041f306350 | p@chr2:24234641..24234644, + |
| 6.34e-47 | FFCP PHASE2:Mm9::chr14:26286217..26286232,+#_8d09444007166f100819c1041f306350 | p@chr14:26286217..26286232, + |
| 6.34e-47 | FFCP PHASE1:Mm9::chr2:24234641..24234644,+#_8d09444007166f100819c1041f306350 | p@chr2:24234641..24234644, + |
| 6.34e-47 | FFCP PHASE2:Mm9::chr6:137486449..137486455,+#_8d09444007166f100819c1041f306350 | p@chr6:137486449..137486455, + |
| 6.34e-47 | FFCP PHASE1:Mm9::chr4:142835790..142835793,-#_8d09444007166f100819c1041f306350 | p@chr4:142835790..142835793, - |
| 6.34e-47 | FFCP PHASE2:Mm9::chr1:13659869..13659873,-#_8d09444007166f100819c1041f306350 | p@chr1:13659869..13659873, - |
| 6.34e-47 | FFCP PHASE2:Mm9::chr4:142835790..142835793,-#_8d09444007166f100819c1041f306350 | p@chr4:142835790..142835793, - |
| 1.09e-46 | FFCP PHASE2:Mm9::chr5:136252496..136252506,+#_36765d1910f8ed01d30acabe59583eda | p@chr5:136252496..136252506, + |
| 1.09e-46 | FFCP PHASE1:Mm9::chr5:136252496..136252506,+#_36765d1910f8ed01d30acabe59583eda | p@chr5:136252496..136252506, + |
| 6.32e-46 | FFCP PHASE2:Mm9::chr19:11893526..11893532,+#_c762c5faba419b30338dd452b33d1c81 | p@chr19:11893526..11893532, + |
| 6.32e-46 | FFCP PHASE2:Mm9::chr2:31008686..31008692,-#_c762c5faba419b30338dd452b33d1c81 | p@chr2:31008686..31008692, - |
| 6.32e-46 | FFCP PHASE1:Mm9::chr2:31008686..31008692,-#_c762c5faba419b30338dd452b33d1c81 | p@chr2:31008686..31008692, - |
| 6.32e-46 | FFCP PHASE1:Mm9::chr19:11893526..11893532,+#_c762c5faba419b30338dd452b33d1c81 | p@chr19:11893526..11893532, + |
| 7.81e-46 | FFCP PHASE2:Mm9::chr10:79561288..79561291,-#_1ec1b38f00def004638e7a6be4cbf5f5 | p@chr10:79561288..79561291, - |
| 7.81e-46 | FFCP PHASE1:Mm9::chr10:79561288..79561291,-#_1ec1b38f00def004638e7a6be4cbf5f5 | p@chr10:79561288..79561291, - |
| 1.47e-45 | FFCP PHASE2:Mm9::chr3:35620179..35620188,+#_732158052828d519d07380a1ffdbbe52 | p@chr3:35620179..35620188, + |
| 1.47e-45 | FFCP PHASE1:Mm9::chr3:35620179..35620188,+#_732158052828d519d07380a1ffdbbe52 | p@chr3:35620179..35620188, + |
| 1.2e-44 | FFCP PHASE2:Mm9::chr18:66636209..66636215,-#_5bcf000756be1f3c75ffa4a6e206ed64 | p@chr18:66636209..66636215, - |
| 1.2e-44 | FFCP PHASE2:Mm9::chr15:103135874..103135880,+#_5bcf000756be1f3c75ffa4a6e206ed64 | p@chr15:103135874..103135880, + |
| 1.2e-44 | FFCP PHASE1:Mm9::chr18:66636209..66636215,-#_5bcf000756be1f3c75ffa4a6e206ed64 | p@chr18:66636209..66636215, - |
| 1.2e-44 | FFCP PHASE1:Mm9::chr15:103135874..103135880,+#_5bcf000756be1f3c75ffa4a6e206ed64 | p@chr15:103135874..103135880, + |
| 1.42e-44 | FFCP PHASE1:Mm9::chr16:78268076..78268083,-#_dbf69bc809027ec5ba3ada269402f3c7 | p@chr16:78268076..78268083, - |
| 1.42e-44 | FFCP PHASE2:Mm9::chr10:80565428..80565433,+#_dbf69bc809027ec5ba3ada269402f3c7 | p@chr10:80565428..80565433, + |
| 1.42e-44 | FFCP PHASE1:Mm9::chr10:80565428..80565433,+#_dbf69bc809027ec5ba3ada269402f3c7 | p@chr10:80565428..80565433, + |
| 1.42e-44 | FFCP PHASE2:Mm9::chr16:78268076..78268083,-#_dbf69bc809027ec5ba3ada269402f3c7 | p@chr16:78268076..78268083, - |
| 5.38e-44 | FFCP PHASE1:Mm9::chr1:132748706..132748715,+#_7ec3265dec5bfd12563b3d30970b1e78 | p@chr1:132748706..132748715, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr1:132748706..132748715,+#_7ec3265dec5bfd12563b3d30970b1e78 | p@chr1:132748706..132748715, + |
| 5.58e-44 | FFCP PHASE1:Mm9::chr2:143738263..143738267,+#_055b65292261221164f9e15ddb6da0a3 | p@chr2:143738263..143738267, + |
| 5.58e-44 | FFCP PHASE2:Mm9::chr2:143738263..143738267,+#_055b65292261221164f9e15ddb6da0a3 | p@chr2:143738263..143738267, + |
| 7.05e-43 | FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_dfdcc06b1cd9c49450d7f4250a78ddaa | p@chr3:122215917..122215967, - |
| 7.05e-43 | FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_dfdcc06b1cd9c49450d7f4250a78ddaa | p@chr3:122215917..122215967, - |
| 2.1e-41 | FFCP PHASE1:Mm9::chr12:111682896..111682907,+#_d0eff0d8d3b14107e073c1e5957f0945 | p@chr12:111682896..111682907, + |
| 2.1e-41 | FFCP PHASE2:Mm9::chr12:111682896..111682907,+#_d0eff0d8d3b14107e073c1e5957f0945 | p@chr12:111682896..111682907, + |
| 2.46e-41 | FFCP PHASE1:Mm9::chr16:32380022..32380027,+#_3c5cfbabf6f4242bac46dbdd860ddacc | p@chr16:32380022..32380027, + |
| 2.46e-41 | FFCP PHASE2:Mm9::chr16:32380022..32380027,+#_3c5cfbabf6f4242bac46dbdd860ddacc | p@chr16:32380022..32380027, + |
| 2.88e-41 | FFCP PHASE1:Mm9::chr7:96869911..96869915,+#_7f5e32974a42d33d6506fa24ff2a5f91 | p@chr7:96869911..96869915, + |
| 2.88e-41 | FFCP PHASE2:Mm9::chr7:96869911..96869915,+#_7f5e32974a42d33d6506fa24ff2a5f91 | p@chr7:96869911..96869915, + |
| 3.41e-41 | FFCP PHASE1:Mm9::chr11:120478620..120478628,+#_a22e6853ef1a7debed84b953a813ca58 | p@chr11:120478620..120478628, + |
| 3.41e-41 | FFCP PHASE2:Mm9::chr11:120478620..120478628,+#_a22e6853ef1a7debed84b953a813ca58 | p@chr11:120478620..120478628, + |
| 4.98e-41 | FFCP PHASE1:Mm9::chr5:66443992..66444014,-#_9b4d211489621b694f62c90747111e81 | p@chr5:66443992..66444014, - |
| 4.98e-41 | FFCP PHASE2:Mm9::chr5:66443992..66444014,-#_9b4d211489621b694f62c90747111e81 | p@chr5:66443992..66444014, - |
| 5.43e-41 | FFCP PHASE2:Mm9::chr7:4101973..4101978,-#_5d734b6aec0a12edda3a4a51dc528c41 | p4@Leng9 |
| 5.43e-41 | FFCP PHASE1:Mm9::chr7:4101973..4101978,-#_5d734b6aec0a12edda3a4a51dc528c41 | p4@Leng9 |
| 6.02e-41 | FFCP PHASE1:Mm9::chr9:95715941..95715947,+#_02b05c586c7f2f56f4f20636de49d11a | p@chr9:95715941..95715947, + |
| 6.02e-41 | FFCP PHASE2:Mm9::chr9:95715941..95715947,+#_02b05c586c7f2f56f4f20636de49d11a | p@chr9:95715941..95715947, + |
| 7.27e-41 | FFCP PHASE1:Mm9::chr2:75543070..75543079,-#_21755c2e759b48d4a45f206c3fe6f562 | p7@Nfe2l2 |
| 7.27e-41 | FFCP PHASE2:Mm9::chr2:75543070..75543079,-#_21755c2e759b48d4a45f206c3fe6f562 | p7@Nfe2l2 |
| 1.28e-40 | FFCP PHASE1:Mm9::chr5:29704314..29704350,+#_b0f61e8fb3575cc37a9000b5d2d3619f | p@chr5:29704314..29704350, + |
| 1.28e-40 | FFCP PHASE2:Mm9::chr5:29704314..29704350,+#_b0f61e8fb3575cc37a9000b5d2d3619f | p@chr5:29704314..29704350, + |
| 1.54e-40 | FFCP PHASE2:Mm9::chr2:38781010..38781017,+#_40bfc04845afb008b4e462475117bb76 | p@chr2:38781010..38781017, + |
| 1.54e-40 | FFCP PHASE1:Mm9::chr2:38781010..38781017,+#_40bfc04845afb008b4e462475117bb76 | p@chr2:38781010..38781017, + |
| 1.63e-40 | FFCP PHASE2:Mm9::chr17:71337821..71337827,+#_7e99681488fa0a0b8c6e6593f82fb1cb | p@chr17:71337821..71337827, + |
| 1.63e-40 | FFCP PHASE1:Mm9::chr17:71337821..71337827,+#_7e99681488fa0a0b8c6e6593f82fb1cb | p@chr17:71337821..71337827, + |
| 2.24e-40 | FFCP PHASE2:Mm9::chr1:127346940..127346945,-#_21e70f6de66a7dd3ea64233cc1cecad6 | p@chr1:127346940..127346945, - |
| 2.24e-40 | FFCP PHASE1:Mm9::chr1:127346940..127346945,-#_21e70f6de66a7dd3ea64233cc1cecad6 | p@chr1:127346940..127346945, - |
| 3.57e-40 | FFCP PHASE1:Mm9::chr5:91570078..91570084,+#_74058183ce90bea5f8ecfb0f35243e14 | p@chr5:91570078..91570084, + |
| 3.57e-40 | FFCP PHASE2:Mm9::chr5:91570078..91570084,+#_74058183ce90bea5f8ecfb0f35243e14 | p@chr5:91570078..91570084, + |
| 5.71e-40 | FFCP PHASE1:Mm9::chr7:4101821..4101832,-#_debdd796f6388d7b3f6fe1f538161eb1 | p5@Leng9 |
| 5.71e-40 | FFCP PHASE2:Mm9::chr7:4101821..4101832,-#_debdd796f6388d7b3f6fe1f538161eb1 | p5@Leng9 |
