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{{CL
{{CL
|id=CL:0000569
|alt_id=
|name=cardiac mesenchymal cell
|namespace=cell
|def="A mesenchymal cell found in the developing heart." [PMID:18816864]
|xref=
|is_a=CL:0000134;;CL:0002494
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A mesenchymal cell found in the developing heart." [PMID:18816864]
|subset=
|derives_from=
|derives_from=
|develops_from=CL:0000011
|develops_from=CL:0000011
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000569
|is_a=CL:0000134 ;;CL:0002494
|is_obsolete=
|located_in=
|located_in=
|name=cardiac mesenchymal cell
|namespace=cell
|obo_creation_date=
|part_of=UBERON:0000948
|part_of=UBERON:0000948
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:19, 12 September 2014

Name:cardiac mesenchymal cell
Namespace:cell
Definition:"A mesenchymal cell found in the developing heart." [PMID:18816864]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000134(mesenchymal cell),CL:0002494(cardiocyte)
develops_from:CL:0000011(migratory trunk neural crest cell)
part_of:UBERON:0000948(heart)



Children


derives from:FF:0000271 (human cardiac mesenchymal precursor cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000569 (cardiac mesenchymal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.91e-111FFCP PHASE2:Hg19::chr4:74765097..74765105,-#_f327e4eb4591f2489d291812a1aa672cp@chr4:74765097..74765105, -
8.91e-111FFCP PHASE1:Hg19::chr4:74765097..74765105,-#_f327e4eb4591f2489d291812a1aa672cp@chr4:74765097..74765105, -
1.55e-98FFCP PHASE1:Hg19::chr16:72981491..72981495,+#_3db9de1e80bf278218d1f0dc12507ee5p@chr16:72981491..72981495, +
1.55e-98FFCP PHASE2:Hg19::chr16:72981491..72981495,+#_3db9de1e80bf278218d1f0dc12507ee5p@chr16:72981491..72981495, +
9.04e-74FFCP PHASE2:Hg19::chr11:26290922..26290932,-#_31012705c957dff075fd45c2a4b4b4c8p@chr11:26290922..26290932, -
9.04e-74FFCP PHASE1:Hg19::chr11:26290922..26290932,-#_31012705c957dff075fd45c2a4b4b4c8p@chr11:26290922..26290932, -
9.13e-58FFCP PHASE1:Hg19::chr6:14671928..14671958,+#_aa97d8a44eea38fa4b3db7cc704a5f7bp@chr6:14671928..14671958, +
9.13e-58FFCP PHASE2:Hg19::chr6:14671928..14671958,+#_aa97d8a44eea38fa4b3db7cc704a5f7bp@chr6:14671928..14671958, +
1.88e-57FFCP PHASE1:Hg19::chr13:44794616..44794621,+#_8c54e761fafbade3307da9807ccf063dp@chr13:44794616..44794621, +
1.88e-57FFCP PHASE2:Hg19::chr13:44794616..44794621,+#_8c54e761fafbade3307da9807ccf063dp@chr13:44794616..44794621, +
3.14e-56FFCP PHASE1:Hg19::chr9:118454273..118454278,+#_89d8481dbcbd986dd241fbaf12fb7792p@chr9:118454273..118454278, +
3.14e-56FFCP PHASE2:Hg19::chr9:118454273..118454278,+#_89d8481dbcbd986dd241fbaf12fb7792p@chr9:118454273..118454278, +
3.1e-50FFCP PHASE1:Hg19::chr10:100013403..100013414,-#_9871ac96ee176a294bf0624cfb073dfdp@chr10:100013403..100013414, -
3.1e-50FFCP PHASE2:Hg19::chr10:100013403..100013414,-#_9871ac96ee176a294bf0624cfb073dfdp@chr10:100013403..100013414, -
3.1e-50FFCP PHASE1:Hg19::chr5:99385675..99385684,-#_9871ac96ee176a294bf0624cfb073dfdp@chr5:99385675..99385684, -
3.1e-50FFCP PHASE2:Hg19::chr5:99385675..99385684,-#_9871ac96ee176a294bf0624cfb073dfdp@chr5:99385675..99385684, -
3.1e-50FFCP PHASE1:Hg19::chr10:127911322..127911325,-#_9871ac96ee176a294bf0624cfb073dfdp@chr10:127911322..127911325, -
3.1e-50FFCP PHASE2:Hg19::chr10:127911322..127911325,-#_9871ac96ee176a294bf0624cfb073dfdp@chr10:127911322..127911325, -
3.11e-50FFCP PHASE1:Hg19::chr2:238116338..238116342,-#_2facb5093bc8d1443f7d3eef2c8e0aa0p@chr2:238116338..238116342, -
3.11e-50FFCP PHASE2:Hg19::chr2:238116338..238116342,-#_2facb5093bc8d1443f7d3eef2c8e0aa0p@chr2:238116338..238116342, -
5.14e-50FFCP PHASE1:Hg19::chr5:82848954..82848959,-#_24bd60b83e447a1ea4a0e1de0fe5aa79p@chr5:82848954..82848959, -
5.14e-50FFCP PHASE2:Hg19::chr5:82848954..82848959,-#_24bd60b83e447a1ea4a0e1de0fe5aa79p@chr5:82848954..82848959, -
7.22e-50FFCP PHASE1:Hg19::chr11:102668601..102668604,-#_1148c7922742df54b7499c8eea2d70f2p14@MMP1
7.22e-50FFCP PHASE2:Hg19::chr11:102668601..102668604,-#_1148c7922742df54b7499c8eea2d70f2p14@MMP1
4.19e-45FFCP PHASE1:Hg19::chr4:38143865..38143904,-#_de52e7d01bb0ba32f3e425642ba0075ap@chr4:38143865..38143904, -
4.19e-45FFCP PHASE2:Hg19::chr4:38143865..38143904,-#_de52e7d01bb0ba32f3e425642ba0075ap@chr4:38143865..38143904, -
5.66e-45FFCP PHASE1:Hg19::chr9:118453758..118453772,+#_e73136c820277c76e383dedd92cbce03p@chr9:118453758..118453772, +
5.66e-45FFCP PHASE2:Hg19::chr9:118453758..118453772,+#_e73136c820277c76e383dedd92cbce03p@chr9:118453758..118453772, +
5.23e-38FFCP PHASE1:Hg19::chr3:193855009..193855029,+#_f625cbf8ef47fe8dd13619facad0b154p@chr3:193855009..193855029, +
5.23e-38FFCP PHASE2:Hg19::chr3:193855009..193855029,+#_f625cbf8ef47fe8dd13619facad0b154p@chr3:193855009..193855029, +
5.93e-38FFCP PHASE1:Hg19::chr6:169572316..169572322,+#_6e3207f9cc34ef9578de8819861cb76ep@chr6:169572316..169572322, +
5.93e-38FFCP PHASE2:Hg19::chr6:169572316..169572322,+#_6e3207f9cc34ef9578de8819861cb76ep@chr6:169572316..169572322, +
4.28e-34FFCP PHASE1:Hg19::chr8:49194425..49194429,+#_9d0512b3eb5116d3747bb2221298d6a6p@chr8:49194425..49194429, +
4.28e-34FFCP PHASE2:Hg19::chr8:49194425..49194429,+#_9d0512b3eb5116d3747bb2221298d6a6p@chr8:49194425..49194429, +
8.36e-34FFCP PHASE1:Hg19::chr3:141105560..141105572,-#_2dd8878ee74138b142d482e5dc9cd9dap@chr3:141105560..141105572, -
8.36e-34FFCP PHASE2:Hg19::chr3:141105560..141105572,-#_2dd8878ee74138b142d482e5dc9cd9dap@chr3:141105560..141105572, -
9.88e-34FFCP PHASE1:Hg19::chr1:183204105..183204116,+#_85c0e364f5d96190fbe7096b3c78e1a2p@chr1:183204105..183204116, +
9.88e-34FFCP PHASE2:Hg19::chr1:183204105..183204116,+#_85c0e364f5d96190fbe7096b3c78e1a2p@chr1:183204105..183204116, +
1.17e-33FFCP PHASE1:Hg19::chr10:25242626..25242636,-#_a5ec9434faaefcea468110b3de82a5dbp@chr10:25242626..25242636, -
1.17e-33FFCP PHASE2:Hg19::chr10:25242626..25242636,-#_a5ec9434faaefcea468110b3de82a5dbp@chr10:25242626..25242636, -
1.63e-33FFCP PHASE2:Hg19::chr2:236548265..236548276,+#_0572bd198ea63508bdfbd930a09febb3p@chr2:236548265..236548276, +
1.63e-33FFCP PHASE1:Hg19::chr2:236548265..236548276,+#_0572bd198ea63508bdfbd930a09febb3p@chr2:236548265..236548276, +
1.48e-30FFCP PHASE1:Hg19::chr16:49733031..49733072,-#_03f3939d525e542ead23cfbfce02feb7p@chr16:49733031..49733072, -
1.48e-30FFCP PHASE2:Hg19::chr16:49733031..49733072,-#_03f3939d525e542ead23cfbfce02feb7p@chr16:49733031..49733072, -
2.64e-28FFCP PHASE1:Hg19::chr16:88278862..88278869,-#_a79e9d95676e8e60195847c4f26b89d0p@chr16:88278862..88278869, -
2.64e-28FFCP PHASE2:Hg19::chr16:88278862..88278869,-#_a79e9d95676e8e60195847c4f26b89d0p@chr16:88278862..88278869, -
6.11e-28FFCP PHASE1:Hg19::chr2:67791424..67791436,+#_be0fb0e8f69d9988f3e719999dd49d60p@chr2:67791424..67791436, +
6.11e-28FFCP PHASE2:Hg19::chr2:67791424..67791436,+#_be0fb0e8f69d9988f3e719999dd49d60p@chr2:67791424..67791436, +
1.85e-27FFCP PHASE1:Hg19::chr9:118434979..118434996,-#_1ad10b109462276931826b196783b5b5p@chr9:118434979..118434996, -
1.85e-27FFCP PHASE2:Hg19::chr9:118434979..118434996,-#_1ad10b109462276931826b196783b5b5p@chr9:118434979..118434996, -
4.67e-27FFCP PHASE1:Hg19::chr4:38133975..38133988,-#_bf9c67878e69cfa8456c9880701e3cb4p@chr4:38133975..38133988, -
4.67e-27FFCP PHASE2:Hg19::chr4:38133975..38133988,-#_bf9c67878e69cfa8456c9880701e3cb4p@chr4:38133975..38133988, -
4.51e-26FFCP PHASE1:Hg19::chr2:67753505..67753511,-#_47d0d2085b22d72c335df9046682a418p@chr2:67753505..67753511, -
4.51e-26FFCP PHASE2:Hg19::chr2:67753505..67753511,-#_47d0d2085b22d72c335df9046682a418p@chr2:67753505..67753511, -
5.56e-26FFCP PHASE1:Hg19::chr13:43938419..43938424,-#_4f037571513c8de644d8c234f90eb7f7p@chr13:43938419..43938424, -
5.56e-26FFCP PHASE2:Hg19::chr13:43938419..43938424,-#_4f037571513c8de644d8c234f90eb7f7p@chr13:43938419..43938424, -
7.14e-26FFCP PHASE2:Hg19::chr22:36940565..36940577,+#_0e54b8ba49a7fe94e57ea834d1ef14a3p@chr22:36940565..36940577, +
7.14e-26FFCP PHASE1:Hg19::chr1:15850650..15850657,-#_0e54b8ba49a7fe94e57ea834d1ef14a3p9@CASP9
7.14e-26FFCP PHASE1:Hg19::chr4:189122939..189122941,-#_0e54b8ba49a7fe94e57ea834d1ef14a3p@chr4:189122939..189122941, -
7.14e-26FFCP PHASE2:Hg19::chr1:15850650..15850657,-#_0e54b8ba49a7fe94e57ea834d1ef14a3p9@CASP9
7.14e-26FFCP PHASE2:Hg19::chr4:189122939..189122941,-#_0e54b8ba49a7fe94e57ea834d1ef14a3p@chr4:189122939..189122941, -
7.14e-26FFCP PHASE1:Hg19::chr22:36940565..36940577,+#_0e54b8ba49a7fe94e57ea834d1ef14a3p@chr22:36940565..36940577, +
9.82e-26FFCP PHASE1:Hg19::chr3:100580536..100580540,-#_89e35350dbe38e69205ca128940cf1f3p@chr3:100580536..100580540, -
9.82e-26FFCP PHASE2:Hg19::chr3:100580536..100580540,-#_89e35350dbe38e69205ca128940cf1f3p@chr3:100580536..100580540, -
1.11e-25FFCP PHASE1:Hg19::chr11:102665915..102665927,+#_cc2c558349b956a04c0098fa1f36c0aep@chr11:102665915..102665927, +
1.11e-25FFCP PHASE2:Hg19::chr11:102665915..102665927,+#_cc2c558349b956a04c0098fa1f36c0aep@chr11:102665915..102665927, +
2.09e-25FFCP PHASE1:Hg19::chr6:4359189..4359231,+#_ce4aff5e6656cd17ed4fedd267f2606cp@chr6:4359189..4359231, +
2.09e-25FFCP PHASE2:Hg19::chr6:4359189..4359231,+#_ce4aff5e6656cd17ed4fedd267f2606cp@chr6:4359189..4359231, +
8.95e-25FFCP PHASE1:Hg19::chr7:93941132..93941136,+#_e045889d0d6e03993990716e35671e89p@chr7:93941132..93941136, +
8.95e-25FFCP PHASE2:Hg19::chr7:93941132..93941136,+#_e045889d0d6e03993990716e35671e89p@chr7:93941132..93941136, +
1.64e-24FFCP PHASE1:Hg19::chr5:90576087..90576091,+#_73c885e1106e6fcf04e2cb322e27186ep@chr5:90576087..90576091, +
1.64e-24FFCP PHASE2:Hg19::chr5:90576087..90576091,+#_73c885e1106e6fcf04e2cb322e27186ep@chr5:90576087..90576091, +
4.21e-24FFCP PHASE1:Hg19::chr11:65083939..65083963,-#_8c3136a1c962b6cb8b6d63bd8dccfa99p@chr11:65083939..65083963, -
4.21e-24FFCP PHASE2:Hg19::chr11:65083939..65083963,-#_8c3136a1c962b6cb8b6d63bd8dccfa99p@chr11:65083939..65083963, -
7.2e-24FFCP PHASE1:Hg19::chr5:52714725..52714740,-#_1edc8ec0d783bd166af89c8ccded7b0dp@chr5:52714725..52714740, -
7.2e-24FFCP PHASE2:Hg19::chr5:52714725..52714740,-#_1edc8ec0d783bd166af89c8ccded7b0dp@chr5:52714725..52714740, -
2.6e-23FFCP PHASE1:Hg19::chr8:49342856..49342863,-#_17560867976f41b45c7ecbf69e0e0a19p1@LOC286068
2.6e-23FFCP PHASE2:Hg19::chr8:49342856..49342863,-#_17560867976f41b45c7ecbf69e0e0a19p1@LOC286068
3.29e-23FFCP PHASE1:Hg19::chr17:38706154..38706158,+#_317b8f88b7b63527c26ea2089d8afae5p@chr17:38706154..38706158, +
3.29e-23FFCP PHASE2:Hg19::chr17:38706154..38706158,+#_317b8f88b7b63527c26ea2089d8afae5p@chr17:38706154..38706158, +
4.29e-23FFCP PHASE1:Hg19::chr3:193853004..193853009,+#_813266c571f1c536836b122535657243p@chr3:193853004..193853009, +
4.29e-23FFCP PHASE2:Hg19::chr3:193853004..193853009,+#_813266c571f1c536836b122535657243p@chr3:193853004..193853009, +
6.42e-23FFCP PHASE1:Hg19::chr17:579567..579585,-#_8fb2efee727b0fada0438101fc15cdaep4@VPS53
6.42e-23FFCP PHASE2:Hg19::chr17:579567..579585,-#_8fb2efee727b0fada0438101fc15cdaep4@VPS53
1.42e-22FFCP PHASE1:Hg19::chr15:67420573..67420606,+#_d3314ac5eb2c63fc9de01f44d8d7b526p@chr15:67420573..67420606, +
1.42e-22FFCP PHASE2:Hg19::chr15:67420573..67420606,+#_d3314ac5eb2c63fc9de01f44d8d7b526p@chr15:67420573..67420606, +
4.97e-22FFCP PHASE1:Hg19::chr8:22249806..22249820,-#_0663a279b073b06cfaf0921f84a689f2p@chr8:22249806..22249820, -
4.97e-22FFCP PHASE2:Hg19::chr8:22249806..22249820,-#_0663a279b073b06cfaf0921f84a689f2p@chr8:22249806..22249820, -
6.62e-22FFCP PHASE2:Hg19::chr6:136336050..136336056,-#_286d44d131282cb6cced0c6fda9b9731p@chr6:136336050..136336056, -
6.62e-22FFCP PHASE1:Hg19::chr6:136336050..136336056,-#_286d44d131282cb6cced0c6fda9b9731p@chr6:136336050..136336056, -
8.82e-22FFCP PHASE1:Hg19::chr5:146861282..146861290,+#_05aadfc5a851ff4a1b34c30b5733484bp@chr5:146861282..146861290, +
8.82e-22FFCP PHASE2:Hg19::chr5:146861282..146861290,+#_05aadfc5a851ff4a1b34c30b5733484bp@chr5:146861282..146861290, +
1.59e-21FFCP PHASE2:Hg19::chr16:29283104..29283109,-#_01bcac7e2c8ed60fd1619fe1c073798dp@chr16:29283104..29283109, -
1.59e-21FFCP PHASE1:Hg19::chr16:29283104..29283109,-#_01bcac7e2c8ed60fd1619fe1c073798dp@chr16:29283104..29283109, -
1.05e-20FFCP PHASE1:Hg19::chr6:22113608..22113630,+#_614ca089d3d27742a733eb666e83e8bep@chr6:22113608..22113630, +
1.05e-20FFCP PHASE2:Hg19::chr6:22113608..22113630,+#_614ca089d3d27742a733eb666e83e8bep@chr6:22113608..22113630, +
1.28e-20FFCP PHASE2:Hg19::chr12:65998939..65998945,-#_a255b2eca18dc203829495c2bc3a152cp@chr12:65998939..65998945, -
1.28e-20FFCP PHASE1:Hg19::chr12:65998939..65998945,-#_a255b2eca18dc203829495c2bc3a152cp@chr12:65998939..65998945, -
1.34e-20FFCP PHASE1:Hg19::chr12:58145604..58145631,-#_fe6ab8b37ca9ede810ab128cb30a48c1p4@CDK4
1.34e-20FFCP PHASE2:Hg19::chr12:58145604..58145631,-#_fe6ab8b37ca9ede810ab128cb30a48c1p4@CDK4

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