FFCP PHASE1:Hg19::chr6:159590423..159590438,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.16e-12!180;CL:0000057!8.68e-12!75;CL:0000136!1.43e-08!15 | |ontology_enrichment_celltype=CL:0000055!1.16e-12!180;CL:0000057!8.68e-12!75;CL:0000136!1.43e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.40e-09;13!CL:0000327;3.44e-08;15!CL:0000062;1.58e-07;9!CL:0000153;8.24e-07;9!CL:0000447;8.24e-07;9 | |ontology_enrichment_celltype_v019=CL:0000136;3.40e-09;13!CL:0000327;3.44e-08;15!CL:0000062;1.58e-07;9!CL:0000153;8.24e-07;9!CL:0000447;8.24e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.47e-11,15;CL:0000057,5.72e-10,76;CL:0000327,3.24e-08,15;CL:0000062,1.82e-07,11;CL:0000375,1.82e-07,11;CL:0000335,1.82e-07,11;CL:0000153,8.35e-07,9;CL:0000447,8.35e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000335;2.04e-07;11 | |ontology_enrichment_development_v019=CL:0000335;2.04e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.76e-08;49!UBERON:0004457;4.43e-08;9!UBERON:0000042;4.43e-08;9!UBERON:0003688;3.29e-07;6!UBERON:0002358;3.29e-07;6!UBERON:0003684;3.29e-07;6!UBERON:0001178;3.29e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000922;3.76e-08;49!UBERON:0004457;4.43e-08;9!UBERON:0000042;4.43e-08;9!UBERON:0003688;3.29e-07;6!UBERON:0002358;3.29e-07;6!UBERON:0003684;3.29e-07;6!UBERON:0001178;3.29e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.97e-07,6;UBERON:0002358,2.97e-07,6;UBERON:0003684,2.97e-07,6;UBERON:0001178,2.97e-07,6;UBERON:0004797,3.79e-07,7;UBERON:0004457,4.88e-07,12;UBERON:0000042,4.88e-07,12 | |||
|phase1_expression=8.90224058425727,17.7703434829516,3.38290569830331,22.0161256376887,1.78784437770915,16.574431957907,5.06599756336621,1.26343974685366,0.522371256399677,0.491467873003018,0,0.655324116390517,0,0.123766352960047,0,1.34465029290355,0,0,0,4.43235809076436,2.04000691244253,15.9861907953825,0.85870796139317,0.410623275218653,2.00868223351684,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,18.0719576192283,12.0321098552613,64.6015474565274,70.7804492875478,169.348934865317,0.0945348171640679,0.221729397462564,0.263504357079378,1.63723844372141,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9091585508596,1.51956613997496,1.85372853138506,10.8997915884549,6.73869926176878,2.80338800071154,1.06748995729705,0.98667019366864,0.622422070799533,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.103325781175765,210.276505738923,244.052459197936,0,0,0.336672227908132,0.250237039743928,0,4.82875382968922,7.35570709917647,433.436799945532,0.453728732640084,6.27863724911017,8.32873816392413,1.90738711043606,0.600182192168805,0.618315175430633,11.3361837620077,8.56137539125313,48.6075836854847,48.9133765909217,1.00973509697646,0.828449087780694,2.90962902273861,3.90510551768276,2.21654616100809,0.339121184620975,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,12.5159625863853,6.43240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.115740113314,5.88034845542168,0,0,0,0.441463099414651,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,1.76113041353732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.432359860250884,1.13618190083742,0.063497894292169,0,0,0,0.102827492703324,0,0,0.672786506072164,1.74384027533312,0.07333828582095,1.93907573636667,0,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,1.29964888536674,0,0,0,1.19812427745791,2.29723871668228,0,1.01346914667305,0.410952645100767,5.19276793395697,0,0,0,0.128343036279748,0.254094624222463,0,1.54657762555539,0,0,0,0,0,1.2269149171914,0.500170521059677,0.813795071099207,0,0.535286966391485,3.78485796081443,0.468565659970853,13.5425744877474,4.5481500811197,0,4.64957918974806,4.97796755062599,0.173767228936166,0.979005787313703,0,0,0.215714200818617,0,2.12189300012382,0,2.72151263996712,119.58796336865,476.345965086146,180.745100814899,33.1880396572265,222.080946094949,80.1052527295165,53.4305039201968,0.308419387605311,5.32685175939381,0.574890092096664,0,0.464841513839837,0,0,0,0,0,0.393373244878272,0,0.616122696835318,0,0,0.527758144464379,0,0.170093705276516,0.215915916102139,0,0,0,0.509752546090077,0,0.447749509444357,0,0,0.769350375349168,3.60816110269676,0.976135183992909,0.515205058238611,58.6960269485581,67.7402994348027,0,0,1.6068392984416,1.25671933779759,0.462145851343933,0,1.24052915236078,0.322260734604821,2.17525040871343,0.681813019328807,11.9302927766628,0,0.192190067365106,0,0,0,2.20368642781448,0.6970372701606,0,0,0,2.40921484835096,0.143124886741991,0,0.316379424718726,4.76575484809562,0,0,0.636406495851874,0.78494864019923,0,0,0.117812402345686,0,0,0.842516912477962,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,1.54911749049875,0,0,0.196498082026242,0.35667105148125,0,28.92174603578,34.5759637607897,0.75894634753143,0.699869440489966,0,4.02181365321472,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,3.95572084034114,0,0,0,31.5142719853751,2.07875276582847,6.75753544618311,0,0,1.00177834520615,0,1.26675244876796,9.76315142430242,7.73594963487214,0,0,0,0.311039587661807,0,0.179021174675609,0,1.28236427328014,0,1.11136990144637,0,0.0927680981618513,3.99227596002388,0,0,0,0,0,0,0,0,1.04174996959975,1.77148277162768,0,0,0,0,0,0,0,8.92622998644046,0,0,0,0.108647371922008,5.10401855571071,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9241908972561,5.04208117669033,24.441205797345,0.889563386041866,0.494255755786011,0.104421949505455,2.83084758518844,61.7984788420067,0,0,0,0,0,19.3585145677862,3.0607276163049,4.80218005176509,0.60129367765797,0.72581733978073,0.664653872707185,0.992975867626496,0.627865836814451,2.38944859545918,0,0,0,0,0,2.27144668714639,0,0,0,0,1.84279131327997,0,16.7225748177594,0.137041924646751,0.19871461170299,0.379864775735272,0.586654148204409,0,3.41524791582964,0,0,0,0.171594997861965,0,0.621262677827163,0,0.135904206073614,0.104602846312333,0,0,0,0,0,2.14882720709979,0,34.072452955215,11.4580212005842,5.0251111720377,1.79711100449092,0.858452096273142,1.33902874465124,23.7829492603011,146.6420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| ||
|short_description=p1@FNDC1 | |short_description=p1@FNDC1 | ||
}} | }} |
Revision as of 17:43, 17 November 2012
Short description: | p1@FNDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FNDC1_5end |
Coexpression cluster: | C4579_Preadipocyte_Fibroblast_skeletal_skin_osteosarcoma_Chondrocyte_leiomyoblastoma |
Association with transcript: | 0bp_to_ENST00000297267, ENST00000340366, NM_032532, uc010kjv.2_5end |
EntrezGene: | FNDC1 |
HGNC: | 21184 |
UniProt: | Q4ZHG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.47e-11 | 15 |
fibroblast | 5.72e-10 | 76 |
extracellular matrix secreting cell | 3.24e-08 | 15 |
osteoblast | 1.82e-07 | 11 |
osteoprogenitor cell | 1.82e-07 | 11 |
mesenchyme condensation cell | 1.82e-07 | 11 |
GAG secreting cell | 8.35e-07 | 9 |
carbohydrate secreting cell | 8.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.97e-07 | 6 |
peritoneum | 2.97e-07 | 6 |
abdominal cavity | 2.97e-07 | 6 |
visceral peritoneum | 2.97e-07 | 6 |
blood vessel layer | 3.79e-07 | 7 |
cavity lining | 4.88e-07 | 12 |
serous membrane | 4.88e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.