FFCP PHASE1:Hg19::chr20:37230511..37230530,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!5.20e-22!254;CL:0002076!9.97e-20!43;CL:0000223!6.98e-18!59;CL:0002368!2.68e-11!13;CL:0000244!7.10e-08!4;CL:0000731!7.10e-08!4;CL:1000507!4.33e-07!12;CL:1000494!4.33e-07!12 | |ontology_enrichment_celltype=CL:0000066!5.20e-22!254;CL:0002076!9.97e-20!43;CL:0000223!6.98e-18!59;CL:0002368!2.68e-11!13;CL:0000244!7.10e-08!4;CL:0000731!7.10e-08!4;CL:1000507!4.33e-07!12;CL:1000494!4.33e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000244;4.80e-15;4!CL:0000731;4.80e-15;4!CL:0002577;1.97e-11;3!CL:0002368;8.67e-10;13!CL:0002536;1.34e-08;2!CL:0000349;1.66e-08;19!CL:0002076;1.09e-07;42 | |ontology_enrichment_celltype_v019=CL:0000244;4.80e-15;4!CL:0000731;4.80e-15;4!CL:0002577;1.97e-11;3!CL:0002368;8.67e-10;13!CL:0002536;1.34e-08;2!CL:0000349;1.66e-08;19!CL:0002076;1.09e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.89e-15,4;CL:0000731,3.89e-15,4;CL:0000066,7.33e-12,253;CL:0002577,1.60e-11,3;CL:0002076,1.67e-11,42;CL:0002368,8.16e-10,13;CL:0002536,1.44e-08,2;CL:0000349,1.61e-08,19;CL:0000223,1.50e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008814;7.63e-08;2!UBERON:0010056;7.63e-08;2 | |ontology_enrichment_development_v019=UBERON:0008814;7.63e-08;2!UBERON:0010056;7.63e-08;2 | ||
|ontology_enrichment_disease=DOID:1749!1.90e-09!14;DOID:305!1.27e-08!106 | |ontology_enrichment_disease=DOID:1749!1.90e-09!14;DOID:305!1.27e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.58e-13!169;UBERON:0000925!2.58e-13!169;UBERON:0006595!2.58e-13!169;UBERON:0005631!1.59e-12!14;UBERON:0000158!1.59e-12!14;UBERON:0006554!5.21e-11!44;UBERON:0001008!1.25e-10!45;UBERON:0000466!1.94e-09!126;UBERON:0000464!4.41e-09!104;UBERON:0005156!1.06e-08!59;UBERON:0000990!1.06e-08!59;UBERON:0000365!1.30e-08!5;UBERON:0003133!6.00e-08!48;UBERON:0003124!7.28e-08!7;UBERON:0000077!1.65e-07!130;UBERON:0000478!1.79e-07!24;UBERON:0003064!2.31e-07!37;UBERON:0000058!2.40e-07!26;UBERON:0006555!2.93e-07!17;UBERON:0005103!2.93e-07!17;UBERON:0000083!2.93e-07!17;UBERON:0009201!2.93e-07!17;UBERON:0004819!2.93e-07!17;UBERON:0006553!2.93e-07!17;UBERON:0003074!2.93e-07!17;UBERON:0003060!2.93e-07!17;UBERON:0000344!3.32e-07!12;UBERON:0004876!4.32e-07!20;UBERON:0009773!4.33e-07!12;UBERON:0001231!4.33e-07!12;UBERON:0004810!4.33e-07!12;UBERON:0005910!4.58e-07!6;UBERON:0000161!5.68e-07!35;UBERON:0001007!5.68e-07!155;UBERON:0001555!5.68e-07!155;UBERON:0007026!5.68e-07!155;UBERON:0001987!5.92e-07!4;UBERON:0004340!5.92e-07!4;UBERON:0005177!8.09e-07!107;UBERON:0004175!9.75e-07!25;UBERON:0000080!9.89e-07!18;UBERON:0002120!9.89e-07!18;UBERON:0004875!9.89e-07!18;UBERON:0005721!9.89e-07!18;UBERON:0005754!9.89e-07!18;UBERON:0007297!9.89e-07!18 | |ontology_enrichment_uberon=UBERON:0004119!2.58e-13!169;UBERON:0000925!2.58e-13!169;UBERON:0006595!2.58e-13!169;UBERON:0005631!1.59e-12!14;UBERON:0000158!1.59e-12!14;UBERON:0006554!5.21e-11!44;UBERON:0001008!1.25e-10!45;UBERON:0000466!1.94e-09!126;UBERON:0000464!4.41e-09!104;UBERON:0005156!1.06e-08!59;UBERON:0000990!1.06e-08!59;UBERON:0000365!1.30e-08!5;UBERON:0003133!6.00e-08!48;UBERON:0003124!7.28e-08!7;UBERON:0000077!1.65e-07!130;UBERON:0000478!1.79e-07!24;UBERON:0003064!2.31e-07!37;UBERON:0000058!2.40e-07!26;UBERON:0006555!2.93e-07!17;UBERON:0005103!2.93e-07!17;UBERON:0000083!2.93e-07!17;UBERON:0009201!2.93e-07!17;UBERON:0004819!2.93e-07!17;UBERON:0006553!2.93e-07!17;UBERON:0003074!2.93e-07!17;UBERON:0003060!2.93e-07!17;UBERON:0000344!3.32e-07!12;UBERON:0004876!4.32e-07!20;UBERON:0009773!4.33e-07!12;UBERON:0001231!4.33e-07!12;UBERON:0004810!4.33e-07!12;UBERON:0005910!4.58e-07!6;UBERON:0000161!5.68e-07!35;UBERON:0001007!5.68e-07!155;UBERON:0001555!5.68e-07!155;UBERON:0007026!5.68e-07!155;UBERON:0001987!5.92e-07!4;UBERON:0004340!5.92e-07!4;UBERON:0005177!8.09e-07!107;UBERON:0004175!9.75e-07!25;UBERON:0000080!9.89e-07!18;UBERON:0002120!9.89e-07!18;UBERON:0004875!9.89e-07!18;UBERON:0005721!9.89e-07!18;UBERON:0005754!9.89e-07!18;UBERON:0007297!9.89e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.80e-12;5!UBERON:0005910;4.85e-10;6!UBERON:0000974;1.55e-09;6!UBERON:0000305;1.05e-08;7!UBERON:0001987;1.12e-08;4!UBERON:0000478;1.93e-08;24!UBERON:0000341;4.11e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000365;4.80e-12;5!UBERON:0005910;4.85e-10;6!UBERON:0000974;1.55e-09;6!UBERON:0000305;1.05e-08;7!UBERON:0001987;1.12e-08;4!UBERON:0000478;1.93e-08;24!UBERON:0000341;4.11e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.06e-12,5;UBERON:0005631,6.09e-12,14;UBERON:0000158,6.09e-12,14;UBERON:0005910,4.23e-10,6;UBERON:0001987,9.59e-09,4;UBERON:0004340,9.59e-09,4;UBERON:0000305,1.13e-08,7;UBERON:0000478,1.86e-08,24;UBERON:0004119,2.37e-08,160;UBERON:0000925,2.37e-08,160;UBERON:0006595,2.37e-08,160;UBERON:0006554,3.20e-08,47;UBERON:0000341,4.27e-08,2;UBERON:0001008,5.34e-08,48;UBERON:0004871,1.38e-07,8 | |||
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| ||
|short_description=p1@ARHGAP40 | |short_description=p1@ARHGAP40 | ||
}} | }} |
Revision as of 07:16, 18 November 2012
Short description: | p1@ARHGAP40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ARHGAP40_5end |
Coexpression cluster: | C4031_Small_teratocarcinoma_epididymis_Placental_clear_amniotic_Bronchial |
Association with transcript: | -46bp_to_ENST00000373345, NM_001164431_5end |
EntrezGene: | ARHGAP40 |
HGNC: | 16226 |
UniProt: | Q5TG30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.89e-15 | 4 |
urothelial cell | 3.89e-15 | 4 |
epithelial cell | 7.33e-12 | 253 |
placental epithelial cell | 1.60e-11 | 3 |
endo-epithelial cell | 1.67e-11 | 42 |
respiratory epithelial cell | 8.16e-10 | 13 |
amniotic epithelial cell | 1.44e-08 | 2 |
extraembryonic cell | 1.61e-08 | 19 |
endodermal cell | 1.50e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
urothelium | 4.06e-12 | 5 |
extraembryonic membrane | 6.09e-12 | 14 |
membranous layer | 6.09e-12 | 14 |
transitional epithelium | 4.23e-10 | 6 |
placenta | 9.59e-09 | 4 |
allantois | 9.59e-09 | 4 |
amnion | 1.13e-08 | 7 |
extraembryonic structure | 1.86e-08 | 24 |
endoderm-derived structure | 2.37e-08 | 160 |
endoderm | 2.37e-08 | 160 |
presumptive endoderm | 2.37e-08 | 160 |
urinary system structure | 3.20e-08 | 47 |
throat | 4.27e-08 | 2 |
renal system | 5.34e-08 | 48 |
somatic layer of lateral plate mesoderm | 1.38e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.