FFCP PHASE1:Hg19::chr11:102745704..102745720,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000359!2.43e-09!32 | |ontology_enrichment_celltype=CL:0000359!2.43e-09!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.09e-15;32!CL:0000840;2.94e-11;5!CL:0002166;7.51e-09;3!CL:0002541;1.92e-08;3!CL:0000192;2.39e-08;43!CL:0002595;2.93e-08;5!CL:0000990;2.56e-07;8 | |ontology_enrichment_celltype_v019=CL:0000359;5.09e-15;32!CL:0000840;2.94e-11;5!CL:0002166;7.51e-09;3!CL:0002541;1.92e-08;3!CL:0000192;2.39e-08;43!CL:0002595;2.93e-08;5!CL:0000990;2.56e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.21e-16,32;CL:0000840,3.07e-11,5;CL:0001029,3.07e-11,5;CL:0000192,9.00e-11,43;CL:0000514,9.00e-11,43;CL:0000680,4.58e-09,58;CL:0000056,4.58e-09,58;CL:0000355,4.58e-09,58;CL:0002166,7.52e-09,3;CL:0000187,1.09e-08,55;CL:0002541,1.94e-08,3;CL:0002595,3.64e-08,5;CL:0000393,1.98e-07,61;CL:0000211,1.98e-07,61;CL:0000990,2.63e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000514;2.39e-08;43 | |ontology_enrichment_development_v019=CL:0000514;2.39e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.52e-07;3!DOID:127;4.52e-07;3 | |ontology_enrichment_disease_v019=DOID:0060084;4.52e-07;3!DOID:127;4.52e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.58e-07,3;DOID:127,3.58e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004573!3.73e-09!33;UBERON:0004571!3.73e-09!33;UBERON:0001637!4.20e-09!42;UBERON:0003509!4.20e-09!42;UBERON:0004572!4.20e-09!42;UBERON:0000468!3.41e-07!659;UBERON:0000467!5.13e-07!625;UBERON:0000480!6.05e-07!626;UBERON:0004872!9.33e-07!84 | |ontology_enrichment_uberon=UBERON:0004573!3.73e-09!33;UBERON:0004571!3.73e-09!33;UBERON:0001637!4.20e-09!42;UBERON:0003509!4.20e-09!42;UBERON:0004572!4.20e-09!42;UBERON:0000468!3.41e-07!659;UBERON:0000467!5.13e-07!625;UBERON:0000480!6.05e-07!626;UBERON:0004872!9.33e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.46e-09;33!UBERON:0004571;4.46e-09;33!UBERON:0003124;1.92e-08;3!UBERON:0000920;1.92e-08;3!UBERON:0004177;2.00e-08;5!UBERON:0005057;2.00e-08;5!UBERON:0003834;2.93e-08;5!UBERON:0001533;2.93e-08;5!UBERON:0001637;1.64e-07;42!UBERON:0003509;1.64e-07;42!UBERON:0004572;1.64e-07;42!UBERON:0001135;2.44e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0004573;4.46e-09;33!UBERON:0004571;4.46e-09;33!UBERON:0003124;1.92e-08;3!UBERON:0000920;1.92e-08;3!UBERON:0004177;2.00e-08;5!UBERON:0005057;2.00e-08;5!UBERON:0003834;2.93e-08;5!UBERON:0001533;2.93e-08;5!UBERON:0001637;1.64e-07;42!UBERON:0003509;1.64e-07;42!UBERON:0004572;1.64e-07;42!UBERON:0001135;2.44e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.98e-11,42;UBERON:0003509,3.98e-11,42;UBERON:0004572,3.98e-11,42;UBERON:0002385,5.33e-10,64;UBERON:0001015,5.33e-10,64;UBERON:0000383,5.33e-10,64;UBERON:0004573,1.41e-09,33;UBERON:0004571,1.41e-09,33;UBERON:0000920,1.94e-08,3;UBERON:0001134,3.40e-08,62;UBERON:0002036,3.40e-08,62;UBERON:0003082,3.40e-08,62;UBERON:0003834,3.64e-08,5;UBERON:0001533,3.64e-08,5;UBERON:0007500,1.03e-07,59;UBERON:0001981,1.03e-07,59;UBERON:0004537,1.03e-07,59;UBERON:0006965,1.03e-07,59;UBERON:0002204,1.06e-07,167;UBERON:0004872,1.78e-07,83;UBERON:0000486,1.87e-07,83;UBERON:0001135,2.45e-07,15 | |||
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| ||
|short_description=p1@MMP12 | |short_description=p1@MMP12 | ||
}} | }} |
Revision as of 11:39, 20 November 2012
Short description: | p1@MMP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MMP12_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_uc001phk.2_5end |
EntrezGene: | MMP12 |
HGNC: | 7158 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.21e-16 | 32 |
immature conventional dendritic cell | 3.07e-11 | 5 |
common dendritic progenitor | 3.07e-11 | 5 |
smooth muscle cell | 9.00e-11 | 43 |
smooth muscle myoblast | 9.00e-11 | 43 |
muscle precursor cell | 4.58e-09 | 58 |
myoblast | 4.58e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.58e-09 | 58 |
epithelial cell of Malassez | 7.52e-09 | 3 |
muscle cell | 1.09e-08 | 55 |
chorionic membrane mesenchymal stem cell | 1.94e-08 | 3 |
smooth muscle cell of the subclavian artery | 3.64e-08 | 5 |
electrically responsive cell | 1.98e-07 | 61 |
electrically active cell | 1.98e-07 | 61 |
conventional dendritic cell | 2.63e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
artery | 3.98e-11 | 42 |
arterial blood vessel | 3.98e-11 | 42 |
arterial system | 3.98e-11 | 42 |
muscle tissue | 5.33e-10 | 64 |
musculature | 5.33e-10 | 64 |
musculature of body | 5.33e-10 | 64 |
systemic artery | 1.41e-09 | 33 |
systemic arterial system | 1.41e-09 | 33 |
egg chorion | 1.94e-08 | 3 |
skeletal muscle tissue | 3.40e-08 | 62 |
striated muscle tissue | 3.40e-08 | 62 |
myotome | 3.40e-08 | 62 |
thoracic segment blood vessel | 3.64e-08 | 5 |
subclavian artery | 3.64e-08 | 5 |
epithelial tube open at both ends | 1.03e-07 | 59 |
blood vessel | 1.03e-07 | 59 |
blood vasculature | 1.03e-07 | 59 |
vascular cord | 1.03e-07 | 59 |
musculoskeletal system | 1.06e-07 | 167 |
splanchnic layer of lateral plate mesoderm | 1.78e-07 | 83 |
multilaminar epithelium | 1.87e-07 | 83 |
smooth muscle tissue | 2.45e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.58e-07 | 3 |
leiomyoma | 3.58e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.