FFCP PHASE1:Hg19::chr11:28857853..28857858,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000359!5.81e-20!32;CL:0000222!3.19e-15!119;CL:0000055!1.02e-14!180;CL:0000192!1.81e-13!42;CL:0000514!1.81e-13!42;CL:0000144!3.70e-12!625;CL:0000220!2.53e-11!246;CL:0002321!4.36e-11!248;CL:0000548!5.47e-11!679;CL:0000004!5.47e-11!679;CL:0000255!5.47e-11!679;CL:0000012!8.80e-11!682;CL:0000077!9.26e-11!19;CL:0000187!7.76e-10!54;CL:0000680!8.34e-10!57;CL:0000056!8.34e-10!57;CL:0000355!8.34e-10!57;CL:0000057!1.90e-09!75;CL:0000393!3.62e-09!60;CL:0000211!3.62e-09!60;CL:0000183!1.92e-08!59;CL:0000003!3.46e-08!722;CL:0002371!3.98e-08!591;CL:0000213!1.61e-07!57;CL:0000215!1.61e-07!57;CL:0000076!3.42e-07!62 | |ontology_enrichment_celltype=CL:0000359!5.81e-20!32;CL:0000222!3.19e-15!119;CL:0000055!1.02e-14!180;CL:0000192!1.81e-13!42;CL:0000514!1.81e-13!42;CL:0000144!3.70e-12!625;CL:0000220!2.53e-11!246;CL:0002321!4.36e-11!248;CL:0000548!5.47e-11!679;CL:0000004!5.47e-11!679;CL:0000255!5.47e-11!679;CL:0000012!8.80e-11!682;CL:0000077!9.26e-11!19;CL:0000187!7.76e-10!54;CL:0000680!8.34e-10!57;CL:0000056!8.34e-10!57;CL:0000355!8.34e-10!57;CL:0000057!1.90e-09!75;CL:0000393!3.62e-09!60;CL:0000211!3.62e-09!60;CL:0000183!1.92e-08!59;CL:0000003!3.46e-08!722;CL:0002371!3.98e-08!591;CL:0000213!1.61e-07!57;CL:0000215!1.61e-07!57;CL:0000076!3.42e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.77e-10;32!CL:1000306;1.81e-08;4!CL:0002547;1.81e-08;4 | |ontology_enrichment_celltype_v019=CL:0000359;5.77e-10;32!CL:1000306;1.81e-08;4!CL:0002547;1.81e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.99e-10,32;CL:1000306,2.06e-08,4;CL:0002547,2.06e-08,4;CL:0000222,1.29e-07,121;CL:0000192,2.04e-07,43;CL:0000514,2.04e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!3.54e-07!14 | |ontology_enrichment_disease=DOID:2394!3.54e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.98e-20!42;UBERON:0003509!3.98e-20!42;UBERON:0004572!3.98e-20!42;UBERON:0002049!5.53e-20!79;UBERON:0007798!5.53e-20!79;UBERON:0001981!2.71e-17!60;UBERON:0007500!2.71e-17!60;UBERON:0004537!2.71e-17!60;UBERON:0006965!2.71e-17!60;UBERON:0004535!3.97e-16!110;UBERON:0001009!2.45e-15!113;UBERON:0004872!3.76e-15!84;UBERON:0000055!9.39e-15!69;UBERON:0004573!2.36e-14!33;UBERON:0004571!2.36e-14!33;UBERON:0003914!5.57e-12!118;UBERON:0000914!7.71e-10!83;UBERON:0002329!7.71e-10!83;UBERON:0003077!7.71e-10!83;UBERON:0003059!7.71e-10!83;UBERON:0007282!7.71e-10!83;UBERON:0009618!7.71e-10!83;UBERON:0007285!7.71e-10!83;UBERON:0000490!8.05e-09!138;UBERON:0001134!1.03e-08!61;UBERON:0002036!1.03e-08!61;UBERON:0003082!1.03e-08!61;UBERON:0002385!3.18e-08!63;UBERON:0001015!3.18e-08!63;UBERON:0000383!3.18e-08!63;UBERON:0000486!4.04e-08!82;UBERON:0004290!1.34e-07!70 | |ontology_enrichment_uberon=UBERON:0001637!3.98e-20!42;UBERON:0003509!3.98e-20!42;UBERON:0004572!3.98e-20!42;UBERON:0002049!5.53e-20!79;UBERON:0007798!5.53e-20!79;UBERON:0001981!2.71e-17!60;UBERON:0007500!2.71e-17!60;UBERON:0004537!2.71e-17!60;UBERON:0006965!2.71e-17!60;UBERON:0004535!3.97e-16!110;UBERON:0001009!2.45e-15!113;UBERON:0004872!3.76e-15!84;UBERON:0000055!9.39e-15!69;UBERON:0004573!2.36e-14!33;UBERON:0004571!2.36e-14!33;UBERON:0003914!5.57e-12!118;UBERON:0000914!7.71e-10!83;UBERON:0002329!7.71e-10!83;UBERON:0003077!7.71e-10!83;UBERON:0003059!7.71e-10!83;UBERON:0007282!7.71e-10!83;UBERON:0009618!7.71e-10!83;UBERON:0007285!7.71e-10!83;UBERON:0000490!8.05e-09!138;UBERON:0001134!1.03e-08!61;UBERON:0002036!1.03e-08!61;UBERON:0003082!1.03e-08!61;UBERON:0002385!3.18e-08!63;UBERON:0001015!3.18e-08!63;UBERON:0000383!3.18e-08!63;UBERON:0000486!4.04e-08!82;UBERON:0004290!1.34e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.54e-12;33!UBERON:0004571;3.54e-12;33!UBERON:0001637;2.20e-11;42!UBERON:0003509;2.20e-11;42!UBERON:0004572;2.20e-11;42!UBERON:0007500;1.76e-10;56!UBERON:0001981;1.76e-10;56!UBERON:0004537;1.76e-10;56!UBERON:0004797;1.81e-08;4!UBERON:0000415;1.81e-08;4!UBERON:0007240;1.81e-08;4!UBERON:0005742;1.81e-08;4!UBERON:0005734;1.81e-08;4!UBERON:0004664;1.81e-08;4!UBERON:0004663;1.81e-08;4!UBERON:0000055;5.50e-08;65 | |ontology_enrichment_uberon_v019=UBERON:0004573;3.54e-12;33!UBERON:0004571;3.54e-12;33!UBERON:0001637;2.20e-11;42!UBERON:0003509;2.20e-11;42!UBERON:0004572;2.20e-11;42!UBERON:0007500;1.76e-10;56!UBERON:0001981;1.76e-10;56!UBERON:0004537;1.76e-10;56!UBERON:0004797;1.81e-08;4!UBERON:0000415;1.81e-08;4!UBERON:0007240;1.81e-08;4!UBERON:0005742;1.81e-08;4!UBERON:0005734;1.81e-08;4!UBERON:0004664;1.81e-08;4!UBERON:0004663;1.81e-08;4!UBERON:0000055;5.50e-08;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.24e-15,42;UBERON:0003509,1.24e-15,42;UBERON:0004572,1.24e-15,42;UBERON:0004573,5.73e-13,33;UBERON:0004571,5.73e-13,33;UBERON:0007500,5.82e-13,59;UBERON:0001981,5.82e-13,59;UBERON:0004537,5.82e-13,59;UBERON:0006965,5.82e-13,59;UBERON:0000055,5.45e-11,68;UBERON:0004872,1.99e-10,83;UBERON:0002049,2.47e-09,78;UBERON:0007798,2.47e-09,78;UBERON:0000415,2.06e-08,4;UBERON:0007240,2.06e-08,4;UBERON:0005742,2.06e-08,4;UBERON:0005734,2.06e-08,4;UBERON:0004664,2.06e-08,4;UBERON:0004663,2.06e-08,4;UBERON:0003914,4.62e-08,117;UBERON:0004535,2.00e-07,109;UBERON:0001009,3.60e-07,112 | |||
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| ||
|short_description=p@chr11:28857853..28857858,- | |short_description=p@chr11:28857853..28857858,- | ||
}} | }} |
Revision as of 07:39, 21 November 2012
Short description: | p@chr11:28857853..28857858, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:28857853..28857858, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.99e-10 | 32 |
fibroblast of tunica adventitia of artery | 2.06e-08 | 4 |
fibroblast of the aortic adventitia | 2.06e-08 | 4 |
mesodermal cell | 1.29e-07 | 121 |
smooth muscle cell | 2.04e-07 | 43 |
smooth muscle myoblast | 2.04e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
artery | 1.24e-15 | 42 |
arterial blood vessel | 1.24e-15 | 42 |
arterial system | 1.24e-15 | 42 |
systemic artery | 5.73e-13 | 33 |
systemic arterial system | 5.73e-13 | 33 |
epithelial tube open at both ends | 5.82e-13 | 59 |
blood vessel | 5.82e-13 | 59 |
blood vasculature | 5.82e-13 | 59 |
vascular cord | 5.82e-13 | 59 |
vessel | 5.45e-11 | 68 |
splanchnic layer of lateral plate mesoderm | 1.99e-10 | 83 |
vasculature | 2.47e-09 | 78 |
vascular system | 2.47e-09 | 78 |
artery wall | 2.06e-08 | 4 |
tunica adventitia of artery | 2.06e-08 | 4 |
adventitia | 2.06e-08 | 4 |
tunica adventitia of blood vessel | 2.06e-08 | 4 |
aorta tunica adventitia | 2.06e-08 | 4 |
aorta wall | 2.06e-08 | 4 |
epithelial tube | 4.62e-08 | 117 |
cardiovascular system | 2.00e-07 | 109 |
circulatory system | 3.60e-07 | 112 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.