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MacroAPE 1083:Motif CNCATG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;24800;0;0!02;6200;6200;6200;6200!03;0;24800;0;0!04;24800;0;0;0!05;0;0;0;24800!06;0;0;24800;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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H5;0.441579!10827-111C8;0.11498!10789-110H6;0.0313894!10828-111C9;0.160959!10788-110H5;0.180128!10792-110H9;0.0837907!10765-110E9;0.102284!10829-111D1;0.120104!10830-111D2;0.129531!10831-111D3;0.169468!10832-111D4;0.0723852!10833-111D5;0.104024!10764-110E8;0.0900052!10770-110F5;0.599007!10399-106A3;0.039968!10400-106A4;0.216752!10405-106A9;0.210039!10834-111D6;0.197176!10835-111D7;0.0282389!10836-111D8;0.221034!10837-111D9;0.291435!10699-109G6;0.120379!10802-111A1;0.27151!10796-110I4;0.455474!10010-101C1;0.534872!10810-111A9;0.60534!10421-106C7;0.378826!10708-109H6;0.150237!12235-129G3;0.564437!12236-129G4;0.223848!12237-129G5;0.0768153!10167-103B5;0.379163!10151-102I7;0.729555!10428-106D5;0.700283!10795-110I3;0.224501!10805-111A4;0.0572335!10052-101G7;0.974411!10189-103D9;0.436161!10589-108D4;0.442162!10425-106D2;0.878879!10427-106D4;0.813018!10702-109G9;0.395602!10432-106D9;0.357855!10496-107C1;0.891204!10718-109I7;0.939029!10011-101C2;0.326516!10053-101G8;0.337502!10686-109F2;0.994416!10084-102B3;0.209538!10012-101C3;0.758915!10085-102B4;0.708638!10482-107A5;0.902366!10419-106C5;0.684514!10080-102A8;0.908768!10760-110E4;0.390737!10709-109H7;0.0491671!10710-109H8;0.477085!10703-109H1;0.570682!10719-109I8;0.28342!10642-109A3;0.390451!10177-103C6;0.852985!10164-103B2;0.622216!10173-103C2;0.713387!10166-103B4;0.621884!10083-102B2;0.650511!10188-103D8;0.754959!10552-107I3;0.644622!10553-107I4;0.397722!10013-101C4;0.587377!10536-107G5;0.264894!10618-108G6;0.267966!10423-106C9;0.66394!10785-110H2;0.797297!12238-129G6;0.952403!12239-129G7;0.0465872!12240-129G8;0.0425833!10416-106C2;0.0545261!10801-110I9;0.177436!10766-110F1;0.0341905!10824-111C5;0.221064!10825-111C6;0.412784!10826-111C7;0.40528!10454-106G4;0.420508!10409-106B4;0.276934!10638-108I8;0.290761!10636-108I6;0.539149!10513-107D9;0.848555!10420-106C6;0.679656!10082-102B1;0.604323!10014-101C5;0.310917!10070-101I7;0.286937!10452-106G2;0.221643!10453-106G3;0.877507!10449-106F8;0.712285!10042-101F6;0.644956!10069-101I6;0.714406!10193-103E4;0.534515!10631-108I1;0.733639!10438-106E6;0.299185!10488-107B2;0.681173!10196-103E7;0.135982!10071-101I8;0.133437!10071-101I8;0.230592!10041-101F5;0.574366!10451-106G1;0.495702!10450-106F9;0.6221!10604-108F1;0.592072!10605-108F2;0.592341!10606-108F3;0.211005!10603-108E9;0.720647!10497-107C2;0.803542!10448-106F7;0.674528!10643-109A4;0.420484!10426-106D3;0.178937!10431-106D8;0.944502!10197-103E8;0.407919!10443-106F2;0.47634!10815-111B5;0.988711!10816-111B6;0.332009!10817-111B7;0.460961!10015-101C6;0.311886!10410-106B5;0.480743!10054-101G9;0.45385!10758-110E2;0.539622!10711-109H9;0.382994!10040-101F4;0.335345!10470-106I2;0.7322!10415-106C1;0.782979!10198-103E9;0.790717!10614-108G2;0.368872!10612-108F9;0.920127!10549-107H9;0.366965!10615-108G3;0.334477!10487-107B1;0.842003!10433-106E1;0.2048!10688-109F4;0.289033!10444-106F3;0.533929!10444-106F3;0.886558!10485-107A8;0.830696!10413-106B8;0.247506!10175-103C4;0.791119!10161-103A8;0.631173!12131-128D7;0.661745!10624-108H3;0.846648!10712-109I1;0.396006!10205-103F7;0.319087!10206-103F8;0.455662!10207-103F9;0.587794!10050-101G5;0.424555!10051-101G6;0.643304!10016-101C7;0.99965!10046-101G1;0.804562!10778-110G4;0.556463!10633-108I3;0.324294!10818-111B8;0.496824!10819-111B9;0.43277!10820-111C1;0.378174!10484-107A7;0.452344!10808-111A7;0.774619!10169-103B7;0.125287!10153-102I9;0.707402!13425-144D5;0.676583!13433-144E4;0.539405!13437-144E8;0.554752!11904-125F5;0.589167!11905-125F6;0.589564!10039-101F3;0.678354!10791-110H8;0.776364!10017-101C8;0.365937!10045-101F9;0.54604!10509-107D5;0.476823!10839-111E2;0.735302!10692-109F8;0.377226!10079-102A7;0.896817!10078-102A6;0.875621!10721-110A1;0.945756!10569-108B2;0.251504!10570-108B3;0.982238!10571-108B4;0.556394!10647-109A8;0.849516!10752-110D5;0.586013!10782-110G8;0.287067!10726-110A6;0.642173!10018-101C9;0.401325!10086-102B5;0.750074!10182-103D2;0.506778!10165-103B3;0.588922!10499-107C4;0.698825!10408-106B3;0.556796!10019-101D1;0.78695!10068-101I5;0.288601!10075-102A3;0.280167!10077-102A5;0.508473!10727-110A7;0.894562!10775-110G1;0.312895!10412-106B7;0.299254!12231-129F8;0.511275!12232-129F9;0.333936!12233-129G1;0.445512!12234-129G2;0.363908!10414-106B9;0.162065!10170-103B8;0.857698!10183-103D3;0.736461!10150-102I6;0.710262!10174-103C3;0.697696!10155-103A2;0.615732!10038-101F2;0.672165!10838-111E1;0.69784!10759-110E3;0.930141!10514-107E1;0.538098!10465-106H6;0.203785!10691-109F7;0.117182!10843-111E6;0.654213!10844-111E7;0.691861!11747-123G1;0.846739!11748-123G2;0.742604!11749-123G3;0.523559!11750-123G4;0.884708!11751-123G5;0.608948!11840-124H4;0.558231!11752-123G6;0.9291!11753-123G7;0.93002!11754-123G8;0.786008!11755-123G9;0.526717!11756-123H1;0.844699!11833-124G6;0.589306!11760-123H5;0.757634!11836-124G9;0.309498!11758-123H3;0.520177!11835-124G8;0.58126!11762-123H7;0.652972!11838-124H2;0.421823!11757-123H2;0.488779!11759-123H4;0.290021!11761-123H6;0.785064!11842-124H6;0.304695!11837-124H1;0.581993!10568-108B1;0.564377!13230-141I8;0.816!13231-141I9;0.315694!10696-109G3;0.25829!10493-107B7;0.0396341!10494-107B8;0.888995!10850-111F4;0.271229!10851-111F5;0.512175!10852-111F6;0.882096!10853-111F7;0.902142!10854-111F8;0.872331!10855-111F9;0.286318!10856-111G1;0.154214!10847-111F1;0.739185!10846-111E9;0.259263!10848-111F2;0.338252!10845-111E8;0.725162!10857-111G2;0.091638!10858-111G3;0.0210007!10156-103A3;0.610982!11901-125F2;0.696175!11902-125F3;0.697448!11903-125F4;0.89819!10689-109F5;0.828094!10648-109A9;0.814702!10784-110H1;0.769804!10744-110C6;0.945032!10772-110F7;0.250067!10474-106I6;0.0737038!10600-108E6;0.243633!10684-109E9;0.60113!12226-129F3;0.708844!12227-129F4;0.494201!10508-107D4;0.194831!10539-107G8;0.785089!10607-108F4;0.747059!10555-107I6;0.905267!10774-110F9;0.782483!10637-108I7;0.324904!10663-109C6;0.868118!10728-110A8;0.709971!10729-110A9;0.8586!10430-106D7;0.298913!10730-110B1;0.673088!10813-111B3;0.717126!10812-111B2;0.0891059!10037-101F1;0.247143!10172-103C1;0.728727!10163-103B1;0.656257!10076-102A4;0.654321!10073-102A1;0.735948!10036-101E9;0.571995!10195-103E6;0.758193!10277-104E7;0.704071!10434-106E2;0.555012!10550-107I1;0.437952!10545-107H5;0.361161!10544-107H4;0.673987!10704-109H2;0.510152!10510-107D6;0.370723!10558-107I9;0.685187!10020-101D2;0.571513!10732-110B3;0.2761!10049-101G4;0.496764!10698-109G5;0.911071!10437-106E5;0.594955!10417-106C3;0.510845!10035-101E8;0.736885!10171-103B9;0.728386!10157-103A4;0.698176!10034-101E7;0.707807!10072-101I9;0.752291!10199-103F1;0.496834!10200-103F2;0.376592!10697-109G4;0.535165!10723-110A3;0.550553!10179-103C8;0.708621!10160-103A7;0.412802!10180-103C9;0.543138!10162-103A9;0.596473!10021-101D3;0.55662!10840-111E3;0.074339!10706-109H4;0.372618!10033-101E6;0.171718!10032-101E5;0.752636!10490-107B4;0.79357!10439-106E7;0.442395!10022-101D4;0.464619!10176-103C5;0.421217!10469-106I1;0.693665!10067-101I4;0.621046!10411-106B6;0.191768!10471-106I3;0.284505!10030-101E3;0.677818!10475-106I7;0.606152!10787-110H4;0.387379!10477-106I9;0.0660058!10695-109G2;0.679592!11771-123I7;0.0197114!11772-123I8;0.955618!11773-123I9;0.190896!10093-102C3;0.11816!10442-106F1;0.442603!10442-106F1;0.562971!10201-103F3;0.469308!10639-108I9;0.196196!11843-124H7;0.101907!11841-124H5;0.971112!10693-109F9;0.80098!10436-106E4;0.732964!10483-107A6;0.872996!10282-104F3;0.315513!10023-101D5;0.938858!10066-101I3;0.847935!10065-101I2;0.449493!10800-110I8;0.304373!10610-108F7;0.734932!10841-111E4;0.561174!10541-107H1;0.203455!10842-111E5;0.849054!10562-108A4;0.991672!10024-101D6;0.95268!10064-101I1;0.187259!10609-108F6;0.166216!10048-101G3;0.771065!10781-110G7;0.513135!10181-103D1;0.860369!10159-103A6;0.539056!10056-101H2;0.611111!10737-110B8;0.505324!10025-101D7;0.107976!10044-101F8;0.898783!10424-106D1;0.713996!10463-106H4;0.287583!10616-108G4;0.505282!10486-107A9;0.485823!10062-101H8;0.549106!10202-103F4;0.117709!10158-103A5;0.466197!10441-106E9;0.713282!10031-101E4;0.870766!10063-101H9;0.814588!10063-101H9;0.546047!11763-123H8;0.215593!11765-123I1;0.284886!11768-123I4;0.475527!10807-111A6;0.403298!10790-110H7;0.387239!10798-110I6;0.451864!10786-110H3;0.943592!10591-108D6;0.74551!10593-108D8;0.977022!10590-108D5;0.722475!10026-101D8;0.707123!10096-102C6;0.494457!10168-103B6;0.748634!10154-103A1;0.591234!10209-103G2;0.638618!10061-101H7;0.694628!10027-101D9;0.325555!10043-101F7;0.48662!10783-110G9;0.22831!10028-101E1;0.983481!10060-101H6;0.213336!10203-103F5;0.236803!10059-101H5;0.691592!10047-101G2;0.463704!10029-101E2;0.793627!10058-101H4;0.536247!10418-106C4;0.302635!10492-107B6;0.846824!10694-109G1;0.783675!10797-110I5;0.00630469!10057-101H3;0.7801!10100-102D1;0.3159!10055-101H1;0.330537!10204-103F6;0.125632!10191-103E2;0.237277!10563-108A5;0.716163
|name=motif_CNCATG
|name=motif_CNCATG
|tomtom_result=INO2#MA0321.1;2;0.00101309;0.482233;0.675117;6;CACATG;TTCACATGC;-!INO4#MA0322.1;2;0.00141831;0.675117;0.675117;6;CACATG;TTCACATGC;-!Pax6#MA0069.1;4;0.0153609;7.31179;1;6;CACATG;TTCACGCATGAGTT;+!Mycn#MA0104.1;0;0.016708;7.95301;1;6;CACATG;CACGTG;+!twi#MA0249.1;1;0.019841;9.44431;1;6;CACATG;TCGCATATGTTG;+!SOK2#MA0385.1;0;0.0201986;9.61455;1;6;CACATG;TGCCTGCAGGT;-
}}
}}

Latest revision as of 14:07, 7 September 2012

Full Name: motif_CNCATG

Motif matrix
POACGT
0102480000
026200620062006200
0302480000
0424800000
0500024800
0600248000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
INO2#MA0321.120.001013090.4822330.6751176CACATGTTCACATGC-
INO4#MA0322.120.001418310.6751170.6751176CACATGTTCACATGC-
Pax6#MA0069.140.01536097.3117916CACATGTTCACGCATGAGTT+
Mycn#MA0104.100.0167087.9530116CACATGCACGTG+
twi#MA0249.110.0198419.4443116CACATGTCGCATATGTTG+
SOK2#MA0385.100.02019869.6145516CACATGTGCCTGCAGGT-
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