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MacroAPE 1083:CNhs10625 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;109.45213943697179;525.0113288567965;249.11181853469105;651.3915650463595!2;33.381416003031525;802.6329840013373;110.98044085190203;587.9720...")
 
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5-106G5;0.132765!10534-107G3;0.00104675!10429-106D6;0.00020476!10464-106H5;0.0166793!10827-111C8;0.00856366!10789-110H6;0.0927302!10828-111C9;0.804289!10788-110H5;0.969473!10792-110H9;0.0845205!10765-110E9;0.0484875!10829-111D1;0.0896596!10830-111D2;0.00462574!10831-111D3;0.317524!10832-111D4;0.535061!10833-111D5;0.00791252!10764-110E8;0.0036939!10770-110F5;0.423596!10399-106A3;0.0772013!10400-106A4;0.236986!10405-106A9;0.354401!10834-111D6;0.176282!10835-111D7;0.102289!10836-111D8;0.00022434!10837-111D9;0.157608!10699-109G6;0.419359!10802-111A1;0.0713043!10796-110I4;0.0856757!10010-101C1;0.0214684!10810-111A9;1.73941e-07!10421-106C7;0.000500392!10708-109H6;0.00880426!12235-129G3;0.00488368!12236-129G4;0.404861!12237-129G5;0.0806341!10167-103B5;0.792262!10151-102I7;0.764769!10428-106D5;0.468983!10795-110I3;0.768362!10805-111A4;0.000814942!10052-101G7;0.243062!10189-103D9;7.63836e-06!10589-108D4;0.000169512!10425-106D2;0.000277729!10427-106D4;0.444452!10702-109G9;0.000196744!10432-106D9;0.334229!10496-107C1;0.0420176!10718-109I7;0.293767!10011-101C2;0.107256!10053-101G8;4.75899e-05!10686-109F2;0.116011!10084-102B3;0.407791!10012-101C3;0.637316!10085-102B4;0.539193!10482-107A5;0.642885!10419-106C5;0.455322!10080-102A8;0.226913!10760-110E4;1.07628e-05!10709-109H7;0.0132102!10710-109H8;0.361803!10703-109H1;0.180119!10719-109I8;0.0468602!10642-109A3;0.220609!10177-103C6;0.706892!10164-103B2;0.695147!10173-103C2;0.599928!10166-103B4;0.941143!10083-102B2;0.816862!10188-103D8;0.851319!10552-107I3;0.327477!10553-107I4;2.07383e-05!10013-101C4;0.959709!10536-107G5;0.000168374!10618-108G6;0.325782!10423-106C9;0.472881!10785-110H2;0.184355!12238-129G6;0.0922568!12239-129G7;0.226915!12240-129G8;0.0480912!10416-106C2;0.526908!10801-110I9;0.000222178!10766-110F1;0.520126!10824-111C5;0.277674!10825-111C6;0.0259373!10826-111C7;0.0305568!10454-106G4;0.0480849!10409-106B4;0.00543433!10638-108I8;0.0372345!10636-108I6;0.00029532!10513-107D9;0.0158826!10420-106C6;0.182372!10082-102B1;0.0177738!10014-101C5;2.84758e-05!10070-101I7;0.000533437!10452-106G2;2.0932e-05!10453-106G3;0.00013691!10449-106F8;3.30787e-05!10042-101F6;1.25586e-05!10069-101I6;0.504131!10193-103E4;0.000390103!10631-108I1;0.766766!10438-106E6;1.88115e-06!10488-107B2;0.585229!10196-103E7;2.0521e-06!10071-101I8;0.0226415!10071-101I8;0.000303117!10041-101F5;0.48503!10451-106G1;0.000140041!10450-106F9;0.000890446!10604-108F1;0.0539735!10605-108F2;0.230601!10606-108F3;0.00724566!10603-108E9;0.286937!10497-107C2;0.0634559!10448-106F7;0.976042!10643-109A4;0.00712089!10426-106D3;0.323979!10431-106D8;0.86103!10197-103E8;0.329871!10443-106F2;0.00104539!10815-111B5;0.472592!10816-111B6;2.89373e-07!10817-111B7;2.00728e-05!10015-101C6;2.15398e-06!10410-106B5;4.36883e-06!10054-101G9;0.00889811!10758-110E2;0.0324379!10711-109H9;0.254841!10040-101F4;0.00191713!10470-106I2;0.590141!10415-106C1;0.058631!10198-103E9;0.402622!10614-108G2;1.10912e-07!10612-108F9;0.850422!10549-107H9;0.00782304!10615-108G3;0.117816!10487-107B1;0.00767577!10433-106E1;2.10796e-07!10688-109F4;0.502375!10444-106F3;0.356552!10444-106F3;0.628456!10485-107A8;0.830081!10413-106B8;0.365505!10175-103C4;0.701913!10161-103A8;0.563648!12131-128D7;0.622498!10624-108H3;0.496036!10712-109I1;0.798387!10205-103F7;0.00206826!10206-103F8;0.00253787!10207-103F9;0.00192172!10050-101G5;3.37297e-06!10051-101G6;0.0273271!10016-101C7;0.0317004!10046-101G1;0.000740513!10778-110G4;0.00755023!10633-108I3;0.23506!10818-111B8;0.215928!10819-111B9;0.000141499!10820-111C1;0.000130814!10484-107A7;0.000109156!10808-111A7;0.00162209!10169-103B7;8.00422e-05!10153-102I9;0.740991!13425-144D5;0.455634!13433-144E4;0.190493!13437-144E8;0.159184!11904-125F5;0.0305122!11905-125F6;0.377312!10039-101F3;0.185791!10791-110H8;0.51553!10017-101C8;0.156157!10045-101F9;0.00846596!10509-107D5;0.0139453!10839-111E2;0.482235!10692-109F8;0.000582803!10079-102A7;0.401267!10078-102A6;0.000643964!10721-110A1;0.00687675!10569-108B2;0.000788476!10570-108B3;0.196897!10571-108B4;0.906717!10647-109A8;0.332316!10752-110D5;0.507162!10782-110G8;0.930949!10726-110A6;0.315941!10018-101C9;0.365309!10086-102B5;0.115293!10182-103D2;0.280817!10165-103B3;0.582763!10499-107C4;0.618703!10408-106B3;0.00813262!10019-101D1;0.456761!10068-101I5;9.84887e-05!10075-102A3;0.000150276!10077-102A5;5.4507e-05!10727-110A7;0.00168648!10775-110G1;0.00343918!10412-106B7;0.0218751!12231-129F8;0.385615!12232-129F9;0.0968001!12233-129G1;0.0510025!12234-129G2;0.151264!10414-106B9;0.441541!10170-103B8;0.0149294!10183-103D3;0.95985!10150-102I6;0.87859!10174-103C3;0.604686!10155-103A2;0.642114!10038-101F2;0.394947!10838-111E1;0.310284!10759-110E3;0.379196!10514-107E1;0.183873!10465-106H6;0.00244375!10691-109F7;0.025436!10843-111E6;0.227038!10844-111E7;0.0154078!11747-123G1;0.130219!11748-123G2;0.254611!11749-123G3;0.61001!11750-123G4;0.174168!11751-123G5;0.331864!11840-124H4;0.823076!11752-123G6;0.794233!11753-123G7;0.369568!11754-123G8;0.853835!11755-123G9;0.258507!11756-123H1;0.160971!11833-124G6;0.828368!11760-123H5;0.271815!11836-124G9;0.661129!11758-123H3;0.615311!11835-124G8;0.978289!11762-123H7;0.257588!11838-124H2;0.0873955!11757-123H2;0.0292333!11759-123H4;0.211279!11761-123H6;0.344752!11842-124H6;0.427582!11837-124H1;0.569388!10568-108B1;0.0651631!13230-141I8;0.00951389!13231-141I9;0.393597!10696-109G3;0.823555!10493-107B7;0.000343517!10494-107B8;0.347285!10850-111F4;0.0803434!10851-111F5;0.0254812!10852-111F6;0.26539!10853-111F7;0.951398!10854-111F8;0.00966542!10855-111F9;0.818322!10856-111G1;0.386852!10847-111F1;0.38555!10846-111E9;0.692217!10848-111F2;0.758698!10845-111E8;0.512514!10857-111G2;0.429782!10858-111G3;0.100372!10156-103A3;0.00432693!11901-125F2;0.635996!11902-125F3;0.974891!11903-125F4;0.685933!10689-109F5;0.778816!10648-109A9;0.0954242!10784-110H1;7.80002e-06!10744-110C6;0.540439!10772-110F7;0.0901036!10474-106I6;0.116085!10600-108E6;0.00380559!10684-109E9;0.136105!12226-129F3;0.00462121!12227-129F4;0.164625!10508-107D4;0.0123976!10539-107G8;0.300534!10607-108F4;0.143838!10555-107I6;0.00268851!10774-110F9;0.161086!10637-108I7;0.01352!10663-109C6;0.0448638!10728-110A8;0.0624584!10729-110A9;0.23241!10430-106D7;0.0335931!10730-110B1;0.00349024!10813-111B3;0.0420004!10812-111B2;0.864068!10037-101F1;0.310593!10172-103C1;0.542961!10163-103B1;0.783827!10076-102A4;0.566164!10073-102A1;0.594395!10036-101E9;0.758957!10195-103E6;0.530096!10277-104E7;0.614432!10434-106E2;0.368007!10550-107I1;0.168261!10545-107H5;0.00653971!10544-107H4;0.644021!10704-109H2;0.497985!10510-107D6;0.959541!10558-107I9;0.83391!10020-101D2;0.810161!10732-110B3;0.0160245!10049-101G4;0.700359!10698-109G5;0.148071!10437-106E5;0.114343!10417-106C3;0.587362!10035-101E8;0.650313!10171-103B9;0.58752!10157-103A4;0.943013!10034-101E7;0.631373!10072-101I9;0.614507!10199-103F1;0.79351!10200-103F2;0.0020962!10697-109G4;0.000289193!10723-110A3;0.0953229!10179-103C8;0.6877!10160-103A7;0.320467!10180-103C9;0.459099!10162-103A9;0.688705!10021-101D3;0.30817!10840-111E3;2.28667e-05!10706-109H4;0.000173233!10033-101E6;0.282089!10032-101E5;0.681791!10490-107B4;0.616009!10439-106E7;0.017762!10022-101D4;0.0160536!10176-103C5;5.73033e-05!10469-106I1;0.717152!10067-101I4;0.418619!10411-106B6;0.0083098!10471-106I3;0.62294!10030-101E3;0.00805326!10475-106I7;0.0261919!10787-110H4;0.0812196!10477-106I9;0.00126748!10695-109G2;0.336306!11771-123I7;0.049339!11772-123I8;0.720843!11773-123I9;0.388447!10093-102C3;0.0165855!10442-106F1;0.000306207!10442-106F1;6.25567e-05!10201-103F3;0.000450997!10639-108I9;0.0300498!11843-124H7;0.94674!11841-124H5;0.0202242!10693-109F9;9.89922e-05!10436-106E4;0.556657!10483-107A6;0.0231672!10282-104F3;0.979908!10023-101D5;0.458622!10066-101I3;0.00333227!10065-101I2;0.00787657!10800-110I8;0.000206641!10610-108F7;0.278144!10841-111E4;0.0576299!10541-107H1;0.016878!10842-111E5;0.367549!10562-108A4;0.0686682!10024-101D6;0.207564!10064-101I1;0.00163356!10609-108F6;0.00622048!10048-101G3;0.109899!10781-110G7;0.00308012!10181-103D1;0.185647!10159-103A6;0.524844!10056-101H2;0.383726!10737-110B8;0.283978!10025-101D7;0.153784!10044-101F8;0.000112865!10424-106D1;1.95109e-05!10463-106H4;0.000232085!10616-108G4;0.977685!10486-107A9;0.00730845!10062-101H8;4.86988e-06!10202-103F4;8.55401e-05!10158-103A5;3.54956e-06!10441-106E9;0.584392!10031-101E4;0.458821!10063-101H9;0.512634!10063-101H9;0.562204!11763-123H8;0.000690557!11765-123I1;0.750945!11768-123I4;0.771818!10807-111A6;0.670972!10790-110H7;0.245224!10798-110I6;0.101156!10786-110H3;0.69451!10591-108D6;0.443233!10593-108D8;0.759825!10590-108D5;0.246967!10026-101D8;0.145184!10096-102C6;0.640426!10168-103B6;0.0523784!10154-103A1;0.975796!10209-103G2;0.569034!10061-101H7;3.6614e-05!10027-101D9;0.00037631!10043-101F7;0.141156!10783-110G9;0.0101102!10028-101E1;0.215696!10060-101H6;0.0520084!10203-103F5;0.0126929!10059-101H5;1.56941e-05!10047-101G2;0.00141351!10029-101E2;0.000483809!10058-101H4;2.05633e-05!10418-106C4;3.0044e-06!10492-107B6;0.188132!10694-109G1;3.05939e-05!10797-110I5;0.930508!10057-101H3;0.73491!10100-102D1;0.0147302!10055-101H1;0.0010121!10204-103F6;0.000157333!10191-103E2;9.15382e-07!10563-108A5;3.76642e-05
|name=CNhs10625_bl_f0
|name=CNhs10625_bl_f0
|tomtom_result=Klf4#MA0039.1;-1;9.99678e-05;0.0475847;0.0951694;10;TCCCTCCTCTCC;CCTTCCTTTA;-!id1#MA0120.1;-1;0.00161005;0.766382;0.628317;11;TCCCTCCTCTCC;TTTTCCTTTTCG;+!SPIB#MA0081.1;-3;0.00197999;0.942475;0.628317;7;TCCCTCCTCTCC;TTCCTCT;-!MZF1_5-13#MA0057.1;-2;0.00494469;2.35367;0.853124;10;TCCCTCCTCTCC;TTCCCCCTAC;-!MZF1_1-4#MA0056.1;-4;0.00529365;2.51978;0.853124;6;TCCCTCCTCTCC;TCCCCA;-!HMG-I/Y#MA0045.1;1;0.00660386;3.14344;0.853124;12;TCCCTCCTCTCC;GTTTTTCCATTTGTTG;-!SP1#MA0079.2;0;0.00677345;3.22416;0.853124;10;TCCCTCCTCTCC;CCCCGCCCCC;+!SPI1#MA0080.1;-2;0.00764167;3.63744;0.853124;6;TCCCTCCTCTCC;CTTCCG;-!Pax4#MA0068.1;17;0.00806525;3.83906;0.853124;12;TCCCTCCTCTCC;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!ZMS1#MA0441.1;-3;0.00971954;4.6265;0.890809;9;TCCCTCCTCTCC;TTCCCCGCA;+!ETS1#MA0098.1;-2;0.0114814;5.46514;0.890809;6;TCCCTCCTCTCC;CTTCCG;+!YGR067C#MA0425.1;1;0.0115226;5.48474;0.890809;12;TCCCTCCTCTCC;ACCCCACTTTTTTG;+!RME1#MA0370.1;-3;0.0130611;6.21709;0.890809;9;TCCCTCCTCTCC;TTCCTTTGGA;-!ELF5#MA0136.1;0;0.0131001;6.23566;0.890809;9;TCCCTCCTCTCC;TACTTCCTT;+!EWSR1-FLI1#MA0149.1;2;0.0143344;6.82316;0.909754;12;TCCCTCCTCTCC;CCTTCCTTCCTTCCTTCC;-!Trl#MA0205.1;-3;0.0154872;7.37191;0.921489;9;TCCCTCCTCTCC;TTGCTCTCTC;+!PPARG::RXRA#MA0065.2;3;0.0181812;8.65427;0.971099;12;TCCCTCCTCTCC;TGACCTTTGCCCTAC;-!FOXC1#MA0032.1;-4;0.0195704;9.31549;0.971099;8;TCCCTCCTCTCC;TACTTACC;-!ELK1#MA0028.1;-2;0.0204012;9.71099;0.971099;10;TCCCTCCTCTCC;CTTCCGGCTC;-!btd#MA0443.1;-1;0.0204012;9.71099;0.971099;10;TCCCTCCTCTCC;TCCGCCCCCT;-
}}
}}

Latest revision as of 12:01, 7 September 2012

Full Name: CNhs10625_bl_f0

Motif matrix
POACGT
1109.45213943697179525.0113288567965249.11181853469105651.3915650463595
233.381416003031525802.6329840013373110.98044085190203587.9720110185466
315.499189451547428900.48743537009531.2180143292309709617.7622127239442
426.79686617019788869.58140281266940.0638.5885828919501
50.00.00.01534.966851874819
60.01534.9668518748190.00.0
70.01533.91903938033850.01.0478124944804013
831.11990647945219717.47546713979780.0786.3714782555678
90.0799.787152637960529.893350254641245705.2863489822162
10223.3848880951284178.26503523112217200.68114485037512932.6357836981922
1112.54847227568597799.1340286456773203.31969100270837519.9646599507465
12115.48663481282296906.493366725598315.365055958191835497.62179437820504

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Klf4#MA0039.1-19.99678e-050.04758470.095169410TCCCTCCTCTCCCCTTCCTTTA-
id1#MA0120.1-10.001610050.7663820.62831711TCCCTCCTCTCCTTTTCCTTTTCG+
SPIB#MA0081.1-30.001979990.9424750.6283177TCCCTCCTCTCCTTCCTCT-
MZF1_5-13#MA0057.1-20.004944692.353670.85312410TCCCTCCTCTCCTTCCCCCTAC-
MZF1_1-4#MA0056.1-40.005293652.519780.8531246TCCCTCCTCTCCTCCCCA-
HMG-I/Y#MA0045.110.006603863.143440.85312412TCCCTCCTCTCCGTTTTTCCATTTGTTG-
SP1#MA0079.200.006773453.224160.85312410TCCCTCCTCTCCCCCCGCCCCC+
SPI1#MA0080.1-20.007641673.637440.8531246TCCCTCCTCTCCCTTCCG-
Pax4#MA0068.1170.008065253.839060.85312412TCCCTCCTCTCCGAAAAATTTCCCATACTCCACTCCCCCCCC+
ZMS1#MA0441.1-30.009719544.62650.8908099TCCCTCCTCTCCTTCCCCGCA+
ETS1#MA0098.1-20.01148145.465140.8908096TCCCTCCTCTCCCTTCCG+
YGR067C#MA0425.110.01152265.484740.89080912TCCCTCCTCTCCACCCCACTTTTTTG+
RME1#MA0370.1-30.01306116.217090.8908099TCCCTCCTCTCCTTCCTTTGGA-
ELF5#MA0136.100.01310016.235660.8908099TCCCTCCTCTCCTACTTCCTT+
EWSR1-FLI1#MA0149.120.01433446.823160.90975412TCCCTCCTCTCCCCTTCCTTCCTTCCTTCC-
Trl#MA0205.1-30.01548727.371910.9214899TCCCTCCTCTCCTTGCTCTCTC+
PPARG::RXRA#MA0065.230.01818128.654270.97109912TCCCTCCTCTCCTGACCTTTGCCCTAC-
FOXC1#MA0032.1-40.01957049.315490.9710998TCCCTCCTCTCCTACTTACC-
ELK1#MA0028.1-20.02040129.710990.97109910TCCCTCCTCTCCCTTCCGGCTC-
btd#MA0443.1-10.02040129.710990.97109910TCCCTCCTCTCCTCCGCCCCCT-
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