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MacroAPE 1083:Motif GTCNAG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;1936;0!02;0;0;0;1936!03;0;1936;0;0!04;484;484;484;484!05;1936;0;0;0!06;0;0;1936;0 |macroape_1083_sample_pvalues=11376-118A8;0.275556!1...")
 
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05!10429-106D6;0.465879!10464-106H5;0.190251!10827-111C8;0.654234!10789-110H6;0.829613!10828-111C9;0.991743!10788-110H5;0.526228!10792-110H9;0.901874!10765-110E9;0.955767!10829-111D1;0.879465!10830-111D2;0.935534!10831-111D3;0.342847!10832-111D4;0.587037!10833-111D5;0.684114!10764-110E8;0.822726!10770-110F5;0.602679!10399-106A3;0.772111!10400-106A4;0.972097!10405-106A9;0.989726!10834-111D6;0.999603!10835-111D7;0.806126!10836-111D8;0.558714!10837-111D9;0.640426!10699-109G6;0.598926!10802-111A1;0.322532!10796-110I4;0.492586!10010-101C1;0.412862!10810-111A9;0.363012!10421-106C7;0.505637!10708-109H6;0.212711!12235-129G3;0.434615!12236-129G4;0.4309!12237-129G5;0.258519!10167-103B5;0.276336!10151-102I7;0.570965!10428-106D5;0.623939!10795-110I3;0.201945!10805-111A4;0.49016!10052-101G7;0.254629!10189-103D9;0.464839!10589-108D4;0.383095!10425-106D2;0.328316!10427-106D4;0.357948!10702-109G9;0.318126!10432-106D9;0.0762132!10496-107C1;0.398374!10718-109I7;0.508332!10011-101C2;0.826385!10053-101G8;0.552974!10686-109F2;0.343933!10084-102B3;0.751751!10012-101C3;0.773243!10085-102B4;0.831881!10482-107A5;0.567179!10419-106C5;0.188476!10080-102A8;0.17386!10760-110E4;0.526883!10709-109H7;0.4297!10710-109H8;0.479694!10703-109H1;0.829261!10719-109I8;0.433185!10642-109A3;0.295798!10177-103C6;0.350551!10164-103B2;0.641637!10173-103C2;0.610396!10166-103B4;0.277932!10083-102B2;0.439619!10188-103D8;0.429719!10552-107I3;0.860068!10553-107I4;0.545812!10013-101C4;0.0373439!10536-107G5;0.412318!10618-108G6;0.279351!10423-106C9;0.0785226!10785-110H2;0.123093!12238-129G6;0.240588!12239-129G7;0.868993!12240-129G8;0.0966897!10416-106C2;0.926805!10801-110I9;0.830945!10766-110F1;0.711638!10824-111C5;0.63662!10825-111C6;0.569956!10826-111C7;0.656362!10454-106G4;0.637954!10409-106B4;0.720578!10638-108I8;0.322169!10636-108I6;0.410444!10513-107D9;0.114631!10420-106C6;0.191824!10082-102B1;0.386031!10014-101C5;0.344137!10070-101I7;0.310285!10452-106G2;0.396628!10453-106G3;0.363579!10449-106F8;0.532593!10042-101F6;0.502875!10069-101I6;0.956261!10193-103E4;0.457492!10631-108I1;0.771763!10438-106E6;0.557675!10488-107B2;0.245798!10196-103E7;0.416602!10071-101I8;0.831473!10071-101I8;0.317793!10041-101F5;0.77307!10451-106G1;0.351914!10450-106F9;0.68941!10604-108F1;0.466683!10605-108F2;0.514447!10606-108F3;0.505201!10603-108E9;0.645878!10497-107C2;0.731533!10448-106F7;0.626087!10643-109A4;0.363794!10426-106D3;0.405201!10431-106D8;0.439438!10197-103E8;0.247541!10443-106F2;0.458809!10815-111B5;0.639983!10816-111B6;0.409!10817-111B7;0.388564!10015-101C6;0.430472!10410-106B5;0.476544!10054-101G9;0.203195!10758-110E2;0.673344!10711-109H9;0.933203!10040-101F4;0.341549!10470-106I2;0.758859!10415-106C1;0.506328!10198-103E9;0.33326!10614-108G2;0.287051!10612-108F9;0.100421!10549-107H9;0.536259!10615-108G3;0.566967!10487-107B1;0.127676!10433-106E1;0.586062!10688-109F4;0.272837!10444-106F3;0.371667!10444-106F3;0.341712!10485-107A8;0.307932!10413-106B8;0.544226!10175-103C4;0.181771!10161-103A8;0.582106!12131-128D7;0.727699!10624-108H3;0.424503!10712-109I1;0.322132!10205-103F7;0.575855!10206-103F8;0.492563!10207-103F9;0.530934!10050-101G5;0.689252!10051-101G6;0.547802!10016-101C7;0.520341!10046-101G1;0.581875!10778-110G4;0.423398!10633-108I3;0.406678!10818-111B8;0.0550736!10819-111B9;0.340262!10820-111C1;0.38368!10484-107A7;0.364468!10808-111A7;0.461217!10169-103B7;0.640576!10153-102I9;0.600102!13425-144D5;0.738253!13433-144E4;0.122816!13437-144E8;0.26531!11904-125F5;0.214999!11905-125F6;0.552474!10039-101F3;0.370846!10791-110H8;0.727789!10017-101C8;0.532609!10045-101F9;0.350304!10509-107D5;0.311911!10839-111E2;0.0705954!10692-109F8;0.25356!10079-102A7;0.397346!10078-102A6;0.385747!10721-110A1;0.526782!10569-108B2;0.663459!10570-108B3;0.272341!10571-108B4;0.0131955!10647-109A8;0.0367635!10752-110D5;0.100251!10782-110G8;0.787121!10726-110A6;0.491441!10018-101C9;0.335085!10086-102B5;0.362186!10182-103D2;0.358911!10165-103B3;0.83188!10499-107C4;0.842616!10408-106B3;0.40951!10019-101D1;0.127501!10068-101I5;0.360181!10075-102A3;0.396083!10077-102A5;0.32216!10727-110A7;0.236893!10775-110G1;0.436075!10412-106B7;0.751446!12231-129F8;0.115836!12232-129F9;0.718412!12233-129G1;0.749009!12234-129G2;0.93834!10414-106B9;0.649798!10170-103B8;0.154024!10183-103D3;0.611316!10150-102I6;0.67331!10174-103C3;0.674173!10155-103A2;0.909666!10038-101F2;0.947781!10838-111E1;0.923062!10759-110E3;0.315814!10514-107E1;0.301194!10465-106H6;0.195112!10691-109F7;0.302857!10843-111E6;0.864388!10844-111E7;0.51482!11747-123G1;0.0997302!11748-123G2;0.178118!11749-123G3;0.409179!11750-123G4;0.555679!11751-123G5;0.646231!11840-124H4;0.411442!11752-123G6;0.187083!11753-123G7;0.366591!11754-123G8;0.691328!11755-123G9;0.109045!11756-123H1;0.613316!11833-124G6;0.52015!11760-123H5;0.811359!11836-124G9;0.449124!11758-123H3;0.176012!11835-124G8;0.273302!11762-123H7;0.291144!11838-124H2;0.597415!11757-123H2;0.621731!11759-123H4;0.911297!11761-123H6;0.440808!11842-124H6;0.784589!11837-124H1;0.861223!10568-108B1;0.306201!13230-141I8;0.339095!13231-141I9;0.0217507!10696-109G3;0.0123394!10493-107B7;0.400482!10494-107B8;0.823292!10850-111F4;0.471438!10851-111F5;0.615835!10852-111F6;0.770553!10853-111F7;0.922195!10854-111F8;0.841492!10855-111F9;0.272615!10856-111G1;0.774296!10847-111F1;0.684856!10846-111E9;0.592536!10848-111F2;0.611903!10845-111E8;0.314649!10857-111G2;0.730805!10858-111G3;0.469805!10156-103A3;0.739952!11901-125F2;0.588992!11902-125F3;0.190806!11903-125F4;0.215717!10689-109F5;0.356471!10648-109A9;0.905946!10784-110H1;0.177962!10744-110C6;0.353135!10772-110F7;0.414009!10474-106I6;0.730278!10600-108E6;0.691126!10684-109E9;0.778472!12226-129F3;0.98138!12227-129F4;0.370418!10508-107D4;0.383288!10539-107G8;0.330266!10607-108F4;0.684441!10555-107I6;0.152317!10774-110F9;0.25262!10637-108I7;0.400896!10663-109C6;0.197811!10728-110A8;0.157162!10729-110A9;0.157059!10430-106D7;0.093141!10730-110B1;0.290269!10813-111B3;0.0683053!10812-111B2;0.314785!10037-101F1;0.147944!10172-103C1;0.819009!10163-103B1;0.48626!10076-102A4;0.709024!10073-102A1;0.741987!10036-101E9;0.524038!10195-103E6;0.861776!10277-104E7;0.741486!10434-106E2;0.80497!10550-107I1;0.385526!10545-107H5;0.302929!10544-107H4;0.20096!10704-109H2;0.422334!10510-107D6;0.913285!10558-107I9;0.449835!10020-101D2;0.972492!10732-110B3;0.446805!10049-101G4;0.55328!10698-109G5;0.554575!10437-106E5;0.106587!10417-106C3;0.198471!10035-101E8;0.445982!10171-103B9;0.785478!10157-103A4;0.626679!10034-101E7;0.672532!10072-101I9;0.779933!10199-103F1;0.562955!10200-103F2;0.854035!10697-109G4;0.543425!10723-110A3;0.17574!10179-103C8;0.806397!10160-103A7;0.754298!10180-103C9;0.917201!10162-103A9;0.503407!10021-101D3;0.533628!10840-111E3;0.225797!10706-109H4;0.552883!10033-101E6;0.3491!10032-101E5;0.925439!10490-107B4;0.799058!10439-106E7;0.618827!10022-101D4;0.634018!10176-103C5;0.521264!10469-106I1;0.570235!10067-101I4;0.197956!10411-106B6;0.535697!10471-106I3;0.124574!10030-101E3;0.307923!10475-106I7;0.707769!10787-110H4;0.376287!10477-106I9;0.908368!10695-109G2;0.806349!11771-123I7;0.434903!11772-123I8;0.394509!11773-123I9;0.662455!10093-102C3;0.358766!10442-106F1;0.989082!10442-106F1;0.843233!10201-103F3;0.871273!10639-108I9;0.725962!11843-124H7;0.134608!11841-124H5;0.310529!10693-109F9;0.444958!10436-106E4;0.0116381!10483-107A6;0.739701!10282-104F3;0.275357!10023-101D5;0.9831!10066-101I3;0.801957!10065-101I2;0.336508!10800-110I8;0.571342!10610-108F7;0.256629!10841-111E4;0.00986081!10541-107H1;0.676213!10842-111E5;0.310197!10562-108A4;0.202891!10024-101D6;0.086753!10064-101I1;0.249075!10609-108F6;0.185803!10048-101G3;0.0952044!10781-110G7;0.509472!10181-103D1;0.17207!10159-103A6;0.895769!10056-101H2;0.825231!10737-110B8;0.788044!10025-101D7;0.102789!10044-101F8;0.16382!10424-106D1;0.142407!10463-106H4;0.436005!10616-108G4;0.376965!10486-107A9;0.847733!10062-101H8;0.573982!10202-103F4;0.580033!10158-103A5;0.858539!10441-106E9;0.943127!10031-101E4;0.992475!10063-101H9;0.828594!10063-101H9;0.585564!11763-123H8;0.348381!11765-123I1;0.0207942!11768-123I4;0.10269!10807-111A6;0.0198246!10790-110H7;0.31942!10798-110I6;0.103712!10786-110H3;0.0632075!10591-108D6;0.0469114!10593-108D8;0.162112!10590-108D5;0.129677!10026-101D8;0.550819!10096-102C6;0.182216!10168-103B6;0.544317!10154-103A1;0.711773!10209-103G2;0.693934!10061-101H7;0.651704!10027-101D9;0.522542!10043-101F7;0.925256!10783-110G9;0.811161!10028-101E1;0.410268!10060-101H6;0.575144!10203-103F5;0.520305!10059-101H5;0.640518!10047-101G2;0.59576!10029-101E2;0.691927!10058-101H4;0.647926!10418-106C4;0.572725!10492-107B6;0.277357!10694-109G1;0.66286!10797-110I5;0.538085!10057-101H3;0.521532!10100-102D1;0.340649!10055-101H1;0.436853!10204-103F6;0.411965!10191-103E2;0.557508!10563-108A5;0.363542
|name=motif_GTCNAG
|name=motif_GTCNAG
|tomtom_result=ABF2#MA0266.1;0;0.00642542;3.0585;1;6;GTCAAG;CTCTAGA;+!ceh-22#MA0264.1;1;0.0157274;7.48623;1;6;GTCAAG;TTTCAAGTGGT;-
}}
}}

Latest revision as of 12:43, 7 September 2012

Full Name: motif_GTCNAG

Motif matrix
POACGT
010019360
020001936
030193600
04484484484484
051936000
060019360

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ABF2#MA0266.100.006425423.058516GTCAAGCTCTAGA+
ceh-22#MA0264.110.01572747.4862316GTCAAGTTTCAAGTGGT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_GTCNAG&oldid=2133748"