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MacroAPE 1083:Motif CNAGTT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;720;0;0!02;180;180;180;180!03;720;0;0;0!04;0;0;720;0!05;0;0;0;720!06;0;0;0;720 |macroape_1083_sample_pvalues=11376-118A8;0.658767!11327-...")
 
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36564!10788-110H5;0.937281!10792-110H9;0.979105!10765-110E9;0.918701!10829-111D1;0.493353!10830-111D2;0.783338!10831-111D3;0.948886!10832-111D4;0.960864!10833-111D5;0.997871!10764-110E8;0.651481!10770-110F5;0.22522!10399-106A3;0.832071!10400-106A4;0.409503!10405-106A9;0.45712!10834-111D6;0.516026!10835-111D7;0.974061!10836-111D8;0.272887!10837-111D9;0.93608!10699-109G6;0.989294!10802-111A1;0.861971!10796-110I4;0.819788!10010-101C1;0.895954!10810-111A9;0.296777!10421-106C7;0.462262!10708-109H6;0.608055!12235-129G3;0.582889!12236-129G4;0.849556!12237-129G5;0.24115!10167-103B5;0.801933!10151-102I7;0.519887!10428-106D5;0.834936!10795-110I3;0.691952!10805-111A4;0.52573!10052-101G7;0.940425!10189-103D9;0.374789!10589-108D4;0.176731!10425-106D2;0.402507!10427-106D4;0.101008!10702-109G9;0.342944!10432-106D9;0.584628!10496-107C1;0.801915!10718-109I7;0.771897!10011-101C2;0.415184!10053-101G8;0.241098!10686-109F2;0.24337!10084-102B3;0.793157!10012-101C3;0.770486!10085-102B4;0.57598!10482-107A5;0.761883!10419-106C5;0.993942!10080-102A8;0.743114!10760-110E4;0.0860151!10709-109H7;0.540064!10710-109H8;0.905088!10703-109H1;0.909302!10719-109I8;0.0626547!10642-109A3;0.5235!10177-103C6;0.242547!10164-103B2;0.838918!10173-103C2;0.989562!10166-103B4;0.538002!10083-102B2;0.778201!10188-103D8;0.527598!10552-107I3;0.710108!10553-107I4;0.161264!10013-101C4;0.355132!10536-107G5;0.0939667!10618-108G6;0.0772138!10423-106C9;0.534199!10785-110H2;0.427599!12238-129G6;0.421313!12239-129G7;0.810115!12240-129G8;0.426868!10416-106C2;0.390624!10801-110I9;0.868273!10766-110F1;0.438878!10824-111C5;0.649945!10825-111C6;0.280277!10826-111C7;0.297168!10454-106G4;0.311688!10409-106B4;0.34085!10638-108I8;0.64889!10636-108I6;0.237929!10513-107D9;0.740917!10420-106C6;0.789008!10082-102B1;0.58502!10014-101C5;0.0723055!10070-101I7;0.110742!10452-106G2;0.104919!10453-106G3;0.217807!10449-106F8;0.215699!10042-101F6;0.322163!10069-101I6;0.997852!10193-103E4;0.918614!10631-108I1;0.601562!10438-106E6;0.425259!10488-107B2;0.950689!10196-103E7;0.250836!10071-101I8;0.0880227!10071-101I8;0.0205243!10041-101F5;0.895819!10451-106G1;0.293837!10450-106F9;0.296479!10604-108F1;0.43881!10605-108F2;0.521315!10606-108F3;0.446611!10603-108E9;0.821854!10497-107C2;0.592915!10448-106F7;0.81413!10643-109A4;0.183417!10426-106D3;0.571436!10431-106D8;0.692717!10197-103E8;0.742608!10443-106F2;0.314546!10815-111B5;0.260365!10816-111B6;0.205406!10817-111B7;0.208953!10015-101C6;0.235228!10410-106B5;0.224267!10054-101G9;0.554821!10758-110E2;0.808674!10711-109H9;0.178717!10040-101F4;0.0489783!10470-106I2;0.608527!10415-106C1;0.717585!10198-103E9;0.758015!10614-108G2;0.0479398!10612-108F9;0.355325!10549-107H9;0.998039!10615-108G3;0.687905!10487-107B1;0.469134!10433-106E1;0.0473524!10688-109F4;0.0767289!10444-106F3;0.620562!10444-106F3;0.117114!10485-107A8;0.116417!10413-106B8;0.701831!10175-103C4;0.129758!10161-103A8;0.90845!12131-128D7;0.919168!10624-108H3;0.147117!10712-109I1;0.902288!10205-103F7;0.576923!10206-103F8;0.82674!10207-103F9;0.822162!10050-101G5;0.879951!10051-101G6;0.854594!10016-101C7;0.94879!10046-101G1;0.999526!10778-110G4;0.714565!10633-108I3;0.584313!10818-111B8;0.849069!10819-111B9;0.567641!10820-111C1;0.615348!10484-107A7;0.60304!10808-111A7;0.503747!10169-103B7;0.174092!10153-102I9;0.677751!13425-144D5;0.994478!13433-144E4;0.956832!13437-144E8;0.947014!11904-125F5;0.837235!11905-125F6;0.504219!10039-101F3;0.934699!10791-110H8;0.612433!10017-101C8;0.236129!10045-101F9;0.0161994!10509-107D5;0.0200554!10839-111E2;0.0373693!10692-109F8;0.335185!10079-102A7;0.358455!10078-102A6;0.927825!10721-110A1;0.964551!10569-108B2;0.100469!10570-108B3;0.856324!10571-108B4;0.773106!10647-109A8;0.8382!10752-110D5;0.103268!10782-110G8;0.618789!10726-110A6;0.397384!10018-101C9;0.0895341!10086-102B5;0.439252!10182-103D2;0.0247061!10165-103B3;0.75188!10499-107C4;0.741388!10408-106B3;0.224265!10019-101D1;0.335084!10068-101I5;0.024615!10075-102A3;0.0142242!10077-102A5;0.0135427!10727-110A7;0.0479476!10775-110G1;0.23322!10412-106B7;0.574225!12231-129F8;0.373286!12232-129F9;0.327645!12233-129G1;0.291777!12234-129G2;0.552643!10414-106B9;0.277834!10170-103B8;0.94754!10183-103D3;0.395952!10150-102I6;0.536714!10174-103C3;0.85381!10155-103A2;0.641138!10038-101F2;0.773719!10838-111E1;0.976607!10759-110E3;0.0677705!10514-107E1;0.768774!10465-106H6;0.204061!10691-109F7;0.267473!10843-111E6;0.0131393!10844-111E7;0.755236!11747-123G1;0.62625!11748-123G2;0.821263!11749-123G3;0.879821!11750-123G4;0.77684!11751-123G5;0.766259!11840-124H4;0.988751!11752-123G6;0.844358!11753-123G7;0.870699!11754-123G8;0.997956!11755-123G9;0.604435!11756-123H1;0.509363!11833-124G6;0.870528!11760-123H5;0.495135!11836-124G9;0.903075!11758-123H3;0.891677!11835-124G8;0.859715!11762-123H7;0.780772!11838-124H2;0.269906!11757-123H2;0.665059!11759-123H4;0.824316!11761-123H6;0.834234!11842-124H6;0.520468!11837-124H1;0.878149!10568-108B1;0.957576!13230-141I8;0.673026!13231-141I9;0.962347!10696-109G3;0.908108!10493-107B7;0.159428!10494-107B8;0.416202!10850-111F4;0.754482!10851-111F5;0.0760392!10852-111F6;0.346013!10853-111F7;0.505146!10854-111F8;0.0379108!10855-111F9;0.188616!10856-111G1;0.221093!10847-111F1;0.163367!10846-111E9;0.203643!10848-111F2;0.168524!10845-111E8;0.23916!10857-111G2;0.625285!10858-111G3;0.465642!10156-103A3;0.14361!11901-125F2;0.818941!11902-125F3;0.434416!11903-125F4;0.245011!10689-109F5;0.490483!10648-109A9;0.365677!10784-110H1;0.328051!10744-110C6;0.510825!10772-110F7;0.679637!10474-106I6;0.594282!10600-108E6;0.104376!10684-109E9;0.953375!12226-129F3;0.229511!12227-129F4;0.883792!10508-107D4;0.0622265!10539-107G8;0.0545588!10607-108F4;0.0969791!10555-107I6;0.78399!10774-110F9;0.0199779!10637-108I7;0.213138!10663-109C6;0.654593!10728-110A8;0.968498!10729-110A9;0.61616!10430-106D7;0.884415!10730-110B1;0.379198!10813-111B3;0.0989171!10812-111B2;0.410876!10037-101F1;0.797718!10172-103C1;0.828833!10163-103B1;0.45326!10076-102A4;0.962099!10073-102A1;0.541545!10036-101E9;0.770791!10195-103E6;0.649576!10277-104E7;0.613904!10434-106E2;0.647624!10550-107I1;0.935726!10545-107H5;0.955563!10544-107H4;0.612424!10704-109H2;0.641696!10510-107D6;0.606849!10558-107I9;0.780146!10020-101D2;0.953015!10732-110B3;0.1255!10049-101G4;0.0748157!10698-109G5;0.546344!10437-106E5;0.487574!10417-106C3;0.806361!10035-101E8;0.791126!10171-103B9;0.598975!10157-103A4;0.433173!10034-101E7;0.799491!10072-101I9;0.61036!10199-103F1;0.930026!10200-103F2;0.0128014!10697-109G4;0.622424!10723-110A3;0.0998786!10179-103C8;0.218274!10160-103A7;0.751768!10180-103C9;0.747423!10162-103A9;0.517783!10021-101D3;0.578286!10840-111E3;0.0927541!10706-109H4;0.343704!10033-101E6;0.975956!10032-101E5;0.571774!10490-107B4;0.571073!10439-106E7;0.444846!10022-101D4;0.606666!10176-103C5;0.0612305!10469-106I1;0.859447!10067-101I4;0.850328!10411-106B6;0.210131!10471-106I3;0.401962!10030-101E3;0.67352!10475-106I7;0.582717!10787-110H4;0.0476943!10477-106I9;0.250149!10695-109G2;0.581316!11771-123I7;0.343924!11772-123I8;0.108983!11773-123I9;0.043623!10093-102C3;0.0500794!10442-106F1;0.039581!10442-106F1;0.0418651!10201-103F3;0.0412782!10639-108I9;0.0645148!11843-124H7;0.88024!11841-124H5;0.394717!10693-109F9;0.740375!10436-106E4;0.944877!10483-107A6;0.804516!10282-104F3;0.412874!10023-101D5;0.734479!10066-101I3;0.918913!10065-101I2;0.295497!10800-110I8;0.31006!10610-108F7;0.788986!10841-111E4;0.734609!10541-107H1;0.43806!10842-111E5;0.916829!10562-108A4;0.0187772!10024-101D6;0.354097!10064-101I1;0.0316687!10609-108F6;0.0941246!10048-101G3;0.596734!10781-110G7;0.249564!10181-103D1;0.0729411!10159-103A6;0.991939!10056-101H2;0.793133!10737-110B8;0.95229!10025-101D7;0.96832!10044-101F8;0.0387687!10424-106D1;0.0120939!10463-106H4;0.584743!10616-108G4;0.562203!10486-107A9;0.139076!10062-101H8;0.469846!10202-103F4;0.122721!10158-103A5;0.064249!10441-106E9;0.817757!10031-101E4;0.167173!10063-101H9;0.686423!10063-101H9;0.829024!11763-123H8;0.278177!11765-123I1;0.856635!11768-123I4;0.736977!10807-111A6;0.842943!10790-110H7;0.594126!10798-110I6;0.500847!10786-110H3;0.702066!10591-108D6;0.766438!10593-108D8;0.998247!10590-108D5;0.982042!10026-101D8;0.878204!10096-102C6;0.455238!10168-103B6;0.9857!10154-103A1;0.685249!10209-103G2;0.908356!10061-101H7;0.620815!10027-101D9;0.307178!10043-101F7;0.0663969!10783-110G9;0.0133719!10028-101E1;0.298224!10060-101H6;0.527121!10203-103F5;0.678487!10059-101H5;0.66294!10047-101G2;0.614367!10029-101E2;0.118773!10058-101H4;0.113148!10418-106C4;0.274258!10492-107B6;0.54815!10694-109G1;0.179048!10797-110I5;0.92098!10057-101H3;0.860955!10100-102D1;0.77681!10055-101H1;0.137032!10204-103F6;0.0220843!10191-103E2;0.0641441!10563-108A5;0.129131
|name=motif_CNAGTT
|name=motif_CNAGTT
|tomtom_result=kni#MA0451.1;5;0.0159161;7.57608;1;6;CAAGTT;GTGCTCTAGTTT;-!Tcfcp2l1#MA0145.1;0;0.0174915;8.32593;1;6;CAAGTT;CCAGTTCAAACCAG;+!br_Z3#MA0012.1;3;0.0208543;9.92666;1;6;CAAGTT;CTTTTAGTTTA;-
}}
}}

Latest revision as of 13:09, 7 September 2012

Full Name: motif_CNAGTT

Motif matrix
POACGT
01072000
02180180180180
03720000
04007200
05000720
06000720

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

kni#MA0451.150.01591617.5760816CAAGTTGTGCTCTAGTTT-
Tcfcp2l1#MA0145.100.01749158.3259316CAAGTTCCAGTTCAAACCAG+
br_Z3#MA0012.130.02085439.9266616CAAGTTCTTTTAGTTTA-