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MacroAPE 1083:CNhs11882 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;876.1231585028399;514.60381399517;164.18304577273304;464.79095901306977!2;971.0154106995695;122.05048734255942;742.465719808737;184.16935943...")
 
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4-107G3;0.117764!10429-106D6;0.0130063!10464-106H5;0.0296014!10827-111C8;0.00898316!10789-110H6;0.0202457!10828-111C9;0.0169904!10788-110H5;0.0937877!10792-110H9;0.00102257!10765-110E9;0.0552478!10829-111D1;0.00248577!10830-111D2;0.0166073!10831-111D3;0.00312072!10832-111D4;0.046005!10833-111D5;0.0105355!10764-110E8;0.0115097!10770-110F5;0.0341308!10399-106A3;0.111005!10400-106A4;0.0147488!10405-106A9;0.017572!10834-111D6;0.0220387!10835-111D7;0.0703444!10836-111D8;0.419823!10837-111D9;0.0379449!10699-109G6;0.136465!10802-111A1;0.077354!10796-110I4;0.040496!10010-101C1;0.562246!10810-111A9;0.033835!10421-106C7;0.19365!10708-109H6;0.0420956!12235-129G3;0.00957915!12236-129G4;0.0240708!12237-129G5;0.554089!10167-103B5;0.0475793!10151-102I7;0.952389!10428-106D5;0.868131!10795-110I3;0.968506!10805-111A4;0.0187487!10052-101G7;0.320298!10189-103D9;0.0093424!10589-108D4;0.432051!10425-106D2;0.90012!10427-106D4;0.757988!10702-109G9;0.0820186!10432-106D9;0.133264!10496-107C1;0.832388!10718-109I7;0.769977!10011-101C2;0.0146945!10053-101G8;0.104887!10686-109F2;0.284239!10084-102B3;0.605547!10012-101C3;0.663824!10085-102B4;0.730239!10482-107A5;0.841241!10419-106C5;0.307708!10080-102A8;0.631134!10760-110E4;0.00735317!10709-109H7;0.868315!10710-109H8;0.680435!10703-109H1;0.551495!10719-109I8;0.851774!10642-109A3;0.287953!10177-103C6;0.917687!10164-103B2;0.497214!10173-103C2;0.787924!10166-103B4;0.706257!10083-102B2;0.710916!10188-103D8;0.546883!10552-107I3;0.616462!10553-107I4;0.406748!10013-101C4;0.333364!10536-107G5;0.0604753!10618-108G6;0.077414!10423-106C9;0.627888!10785-110H2;0.585991!12238-129G6;0.853213!12239-129G7;0.195364!12240-129G8;0.401611!10416-106C2;0.271308!10801-110I9;0.0263061!10766-110F1;0.00153209!10824-111C5;0.0367213!10825-111C6;0.524203!10826-111C7;0.414779!10454-106G4;0.588751!10409-106B4;0.314805!10638-108I8;0.0833443!10636-108I6;0.693021!10513-107D9;0.951805!10420-106C6;0.865731!10082-102B1;0.150466!10014-101C5;0.146696!10070-101I7;0.0811845!10452-106G2;0.126451!10453-106G3;0.120305!10449-106F8;0.0145647!10042-101F6;0.0118321!10069-101I6;0.351141!10193-103E4;0.014311!10631-108I1;0.655206!10438-106E6;0.0163954!10488-107B2;0.33651!10196-103E7;0.926686!10071-101I8;0.134488!10071-101I8;0.0763808!10041-101F5;0.91162!10451-106G1;0.436046!10450-106F9;0.0764492!10604-108F1;0.0935517!10605-108F2;0.267084!10606-108F3;0.302222!10603-108E9;0.232088!10497-107C2;0.572397!10448-106F7;0.654586!10643-109A4;0.113738!10426-106D3;0.142875!10431-106D8;0.159466!10197-103E8;0.695207!10443-106F2;0.00821076!10815-111B5;0.762805!10816-111B6;0.352654!10817-111B7;0.342094!10015-101C6;0.307469!10410-106B5;0.00100548!10054-101G9;0.706596!10758-110E2;0.189935!10711-109H9;0.152262!10040-101F4;4.35478e-05!10470-106I2;0.843756!10415-106C1;0.335792!10198-103E9;0.246805!10614-108G2;0.0218146!10612-108F9;0.277956!10549-107H9;0.288406!10615-108G3;0.339022!10487-107B1;0.515839!10433-106E1;0.633012!10688-109F4;0.719151!10444-106F3;0.141598!10444-106F3;0.843702!10485-107A8;0.38655!10413-106B8;0.0416226!10175-103C4;0.0704425!10161-103A8;0.389499!12131-128D7;0.392704!10624-108H3;0.103111!10712-109I1;0.405071!10205-103F7;0.00949095!10206-103F8;0.0177434!10207-103F9;0.00215256!10050-101G5;0.00430799!10051-101G6;8.62313e-06!10016-101C7;0.000799355!10046-101G1;0.000801509!10778-110G4;0.00256717!10633-108I3;0.135955!10818-111B8;0.548854!10819-111B9;0.473739!10820-111C1;0.455539!10484-107A7;0.527997!10808-111A7;0.896104!10169-103B7;0.00801932!10153-102I9;0.930993!13425-144D5;0.791745!13433-144E4;0.628592!13437-144E8;0.536319!11904-125F5;0.477859!11905-125F6;0.362422!10039-101F3;0.99895!10791-110H8;0.816675!10017-101C8;0.804134!10045-101F9;0.0151983!10509-107D5;0.0316998!10839-111E2;0.242399!10692-109F8;0.555361!10079-102A7;0.351757!10078-102A6;0.00421617!10721-110A1;0.000175985!10569-108B2;0.613257!10570-108B3;0.951033!10571-108B4;0.988435!10647-109A8;0.938429!10752-110D5;0.65733!10782-110G8;0.0700892!10726-110A6;0.760252!10018-101C9;0.955308!10086-102B5;0.1272!10182-103D2;0.122966!10165-103B3;0.40653!10499-107C4;0.418875!10408-106B3;0.357976!10019-101D1;0.229194!10068-101I5;0.0146943!10075-102A3;0.00142439!10077-102A5;0.0486017!10727-110A7;0.469511!10775-110G1;0.0109578!10412-106B7;0.00771443!12231-129F8;0.891929!12232-129F9;0.0784185!12233-129G1;0.0124921!12234-129G2;0.0162438!10414-106B9;0.0636413!10170-103B8;0.707437!10183-103D3;0.756091!10150-102I6;0.922664!10174-103C3;0.862433!10155-103A2;0.353888!10038-101F2;0.320426!10838-111E1;0.316357!10759-110E3;0.392403!10514-107E1;0.139762!10465-106H6;0.157303!10691-109F7;0.211947!10843-111E6;0.852937!10844-111E7;0.387897!11747-123G1;0.856172!11748-123G2;0.571594!11749-123G3;0.746308!11750-123G4;0.618516!11751-123G5;0.0289372!11840-124H4;0.120787!11752-123G6;0.0916434!11753-123G7;0.266159!11754-123G8;0.170522!11755-123G9;0.940901!11756-123H1;0.319212!11833-124G6;0.8701!11760-123H5;0.483535!11836-124G9;0.906114!11758-123H3;0.336776!11835-124G8;0.0447564!11762-123H7;0.01053!11838-124H2;0.123686!11757-123H2;0.0341934!11759-123H4;0.698675!11761-123H6;0.185361!11842-124H6;0.0783158!11837-124H1;0.222099!10568-108B1;0.156438!13230-141I8;0.233255!13231-141I9;0.643894!10696-109G3;0.687541!10493-107B7;0.0525249!10494-107B8;0.624617!10850-111F4;0.114379!10851-111F5;0.86555!10852-111F6;0.753313!10853-111F7;0.352083!10854-111F8;0.820034!10855-111F9;0.757403!10856-111G1;0.119924!10847-111F1;0.722332!10846-111E9;0.39871!10848-111F2;0.47723!10845-111E8;0.887362!10857-111G2;0.383508!10858-111G3;0.637773!10156-103A3;0.628128!11901-125F2;0.792512!11902-125F3;0.372545!11903-125F4;0.421264!10689-109F5;0.373214!10648-109A9;0.320432!10784-110H1;0.512899!10744-110C6;0.752232!10772-110F7;0.053057!10474-106I6;0.000911439!10600-108E6;0.0606804!10684-109E9;0.702881!12226-129F3;2.621e-06!12227-129F4;0.0520092!10508-107D4;0.0190287!10539-107G8;0.795385!10607-108F4;0.941988!10555-107I6;0.354592!10774-110F9;0.853939!10637-108I7;0.232625!10663-109C6;0.819952!10728-110A8;0.519671!10729-110A9;0.531351!10430-106D7;0.0477764!10730-110B1;0.0154446!10813-111B3;0.286081!10812-111B2;0.383186!10037-101F1;0.479461!10172-103C1;0.782036!10163-103B1;0.838622!10076-102A4;0.805354!10073-102A1;0.884357!10036-101E9;0.949383!10195-103E6;0.737053!10277-104E7;0.796293!10434-106E2;0.144755!10550-107I1;0.765903!10545-107H5;0.67268!10544-107H4;0.314688!10704-109H2;0.963181!10510-107D6;0.331331!10558-107I9;0.152145!10020-101D2;0.440281!10732-110B3;0.0978133!10049-101G4;0.303833!10698-109G5;0.0336466!10437-106E5;0.933462!10417-106C3;0.496534!10035-101E8;0.694085!10171-103B9;0.76756!10157-103A4;0.906826!10034-101E7;0.806763!10072-101I9;0.755995!10199-103F1;0.975009!10200-103F2;0.0357303!10697-109G4;0.0297644!10723-110A3;0.217628!10179-103C8;0.36884!10160-103A7;0.298227!10180-103C9;0.702712!10162-103A9;0.088929!10021-101D3;0.257578!10840-111E3;0.4869!10706-109H4;0.0616471!10033-101E6;0.447316!10032-101E5;0.4352!10490-107B4;0.769012!10439-106E7;0.657073!10022-101D4;0.644398!10176-103C5;0.0632524!10469-106I1;0.741822!10067-101I4;0.149353!10411-106B6;0.540335!10471-106I3;0.946269!10030-101E3;0.430335!10475-106I7;0.427673!10787-110H4;0.272158!10477-106I9;0.616161!10695-109G2;0.951863!11771-123I7;0.426228!11772-123I8;0.00423556!11773-123I9;0.00562318!10093-102C3;0.00276832!10442-106F1;0.0264786!10442-106F1;0.267497!10201-103F3;0.295!10639-108I9;0.255459!11843-124H7;0.182877!11841-124H5;0.627953!10693-109F9;0.300471!10436-106E4;0.629687!10483-107A6;0.874708!10282-104F3;0.717508!10023-101D5;0.0363178!10066-101I3;0.016594!10065-101I2;0.187275!10800-110I8;0.028409!10610-108F7;0.734029!10841-111E4;0.64898!10541-107H1;0.361303!10842-111E5;0.175053!10562-108A4;0.453414!10024-101D6;0.913731!10064-101I1;0.230392!10609-108F6;0.374688!10048-101G3;0.2218!10781-110G7;0.306194!10181-103D1;0.702228!10159-103A6;0.334324!10056-101H2;0.442459!10737-110B8;0.341267!10025-101D7;0.381563!10044-101F8;0.868904!10424-106D1;0.13448!10463-106H4;0.254298!10616-108G4;0.777144!10486-107A9;0.0778999!10062-101H8;0.341994!10202-103F4;0.0249038!10158-103A5;0.0565472!10441-106E9;0.199435!10031-101E4;0.644214!10063-101H9;0.667276!10063-101H9;0.935983!11763-123H8;0.0631944!11765-123I1;0.891206!11768-123I4;0.444878!10807-111A6;0.641237!10790-110H7;0.477176!10798-110I6;0.343961!10786-110H3;0.232928!10591-108D6;0.795739!10593-108D8;0.992593!10590-108D5;0.987728!10026-101D8;0.63018!10096-102C6;0.0551362!10168-103B6;0.783892!10154-103A1;0.572043!10209-103G2;0.486112!10061-101H7;0.00320965!10027-101D9;0.0807293!10043-101F7;0.24029!10783-110G9;0.563804!10028-101E1;0.0857474!10060-101H6;0.000407996!10203-103F5;0.0490938!10059-101H5;0.00194183!10047-101G2;0.00110019!10029-101E2;0.0903035!10058-101H4;0.0121638!10418-106C4;0.0311414!10492-107B6;0.574791!10694-109G1;0.574806!10797-110I5;0.671437!10057-101H3;0.559992!10100-102D1;0.0565359!10055-101H1;0.117803!10204-103F6;0.143414!10191-103E2;0.094248!10563-108A5;0.0319433
|name=CNhs11882_bl_f2
|name=CNhs11882_bl_f2
|tomtom_result=Trl#MA0205.1;0;0.000753252;0.358548;0.717096;10;AAGGGAGAGG;GAGAGAGCAA;-!PPARG::RXRA#MA0065.2;2;0.00460171;2.19042;1;10;AAGGGAGAGG;GTAGGGCAAAGGTCA;+!Klf4#MA0039.1;0;0.00559439;2.66293;1;10;AAGGGAGAGG;TAAAGGAAGG;+!Pax4#MA0068.1;1;0.0094102;4.47925;1;10;AAGGGAGAGG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!EBF1#MA0154.1;4;0.0110393;5.25469;1;6;AAGGGAGAGG;ACCCAAGGGA;+!MZF1_1-4#MA0056.1;0;0.0144655;6.88557;1;6;AAGGGAGAGG;TGGGGA;+!SP1#MA0079.2;-2;0.017632;8.39284;1;8;AAGGGAGAGG;GGGGGCGGGG;-
}}
}}

Latest revision as of 13:11, 7 September 2012

Full Name: CNhs11882_bl_f2

Motif matrix
POACGT
1876.1231585028399514.60381399517164.18304577273304464.79095901306977
2971.0154106995695122.05048734255942742.465719808737184.16935943294493
364.22935476658767.2659052331867061926.224847643721.980869640336046
479.620668463664535.4938998992241721003.6957195272222930.8906893937007
55.3431796427949033.9287790654163762009.06605661991971.3629619556805572
62018.9023456976810.00.00.79863158613055
7534.529659449928385.601544843135571371.344214309849828.225558680896647
81137.289999397839796.32683632535878562.1503230026632223.93381855794829
9794.0352587981406148.0175175033155932.6136016151659145.0345993671887
10479.0097013395436203.0336326571614973.1093900954689364.5482531916369

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.100.0007532520.3585480.71709610AAGGGAGAGGGAGAGAGCAA-
PPARG::RXRA#MA0065.220.004601712.19042110AAGGGAGAGGGTAGGGCAAAGGTCA+
Klf4#MA0039.100.005594392.66293110AAGGGAGAGGTAAAGGAAGG+
Pax4#MA0068.110.00941024.47925110AAGGGAGAGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
EBF1#MA0154.140.01103935.2546916AAGGGAGAGGACCCAAGGGA+
MZF1_1-4#MA0056.100.01446556.8855716AAGGGAGAGGTGGGGA+
SP1#MA0079.2-20.0176328.3928418AAGGGAGAGGGGGGGCGGGG-
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