MacroAPE 1083:CNhs11828 bu f0: Difference between revisions
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(Created page with "{{Macroape_1083
|PWM=PO;A;C;G;T!1;6.670870953913551;1.4750219934430218;272.83640811822784;4.773501372938651!2;28.753639129585636;93.69834099362188;144.75725502319793;18.54656...") |
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C9;0.0478534!10788-110H5;0.0507141!10792-110H9;0.0704125!10765-110E9;0.132052!10829-111D1;0.0765313!10830-111D2;0.0118232!10831-111D3;0.0446893!10832-111D4;0.0302085!10833-111D5;0.0268477!10764-110E8;0.0071038!10770-110F5;0.584051!10399-106A3;0.170455!10400-106A4;0.00955257!10405-106A9;0.0190528!10834-111D6;0.0145368!10835-111D7;0.11038!10836-111D8;0.329269!10837-111D9;0.0704898!10699-109G6;0.0478656!10802-111A1;0.876854!10796-110I4;0.158931!10010-101C1;0.266791!10810-111A9;0.0258578!10421-106C7;0.0666792!10708-109H6;0.9255!12235-129G3;0.816494!12236-129G4;0.077691!12237-129G5;0.0645866!10167-103B5;0.148125!10151-102I7;0.902931!10428-106D5;0.878968!10795-110I3;0.22366!10805-111A4;0.895644!10052-101G7;0.247846!10189-103D9;0.154366!10589-108D4;0.134092!10425-106D2;0.64185!10427-106D4;0.870338!10702-109G9;0.108093!10432-106D9;0.0694622!10496-107C1;0.425259!10718-109I7;0.60359!10011-101C2;0.124784!10053-101G8;0.223192!10686-109F2;0.392648!10084-102B3;0.908449!10012-101C3;0.942017!10085-102B4;0.977584!10482-107A5;0.542541!10419-106C5;0.583486!10080-102A8;0.465499!10760-110E4;0.0227031!10709-109H7;0.858915!10710-109H8;0.486205!10703-109H1;0.546181!10719-109I8;0.18145!10642-109A3;0.660552!10177-103C6;0.642196!10164-103B2;0.689989!10173-103C2;0.861048!10166-103B4;0.823755!10083-102B2;0.930012!10188-103D8;0.825381!10552-107I3;0.897657!10553-107I4;0.0766484!10013-101C4;0.67169!10536-107G5;0.0927211!10618-108G6;0.678795!10423-106C9;0.789102!10785-110H2;0.802469!12238-129G6;0.312871!12239-129G7;0.327454!12240-129G8;0.209971!10416-106C2;0.787655!10801-110I9;0.124098!10766-110F1;0.773553!10824-111C5;0.264657!10825-111C6;0.476622!10826-111C7;0.518485!10454-106G4;0.550124!10409-106B4;0.363965!10638-108I8;0.0835307!10636-108I6;0.881217!10513-107D9;0.503851!10420-106C6;0.607663!10082-102B1;0.431241!10014-101C5;0.0168197!10070-101I7;0.0206326!10452-106G2;0.0113307!10453-106G3;0.524598!10449-106F8;0.457402!10042-101F6;0.477476!10069-101I6;0.923218!10193-103E4;0.600895!10631-108I1;0.768626!10438-106E6;0.19883!10488-107B2;0.60789!10196-103E7;0.783487!10071-101I8;0.0168509!10071-101I8;0.0488239!10041-101F5;0.561079!10451-106G1;0.371533!10450-106F9;0.0524535!10604-108F1;0.539916!10605-108F2;0.522156!10606-108F3;0.877915!10603-108E9;0.527906!10497-107C2;0.595219!10448-106F7;0.250101!10643-109A4;0.735853!10426-106D3;0.544302!10431-106D8;0.428534!10197-103E8;0.757081!10443-106F2;0.333998!10815-111B5;0.767659!10816-111B6;0.720585!10817-111B7;0.846341!10015-101C6;0.929394!10410-106B5;0.0158798!10054-101G9;0.264228!10758-110E2;0.488832!10711-109H9;0.585561!10040-101F4;0.000595197!10470-106I2;0.954332!10415-106C1;0.297667!10198-103E9;0.189644!10614-108G2;0.0108209!10612-108F9;0.206319!10549-107H9;0.933085!10615-108G3;0.183097!10487-107B1;0.152698!10433-106E1;0.198762!10688-109F4;0.812421!10444-106F3;0.463535!10444-106F3;0.631367!10485-107A8;0.640316!10413-106B8;0.289566!10175-103C4;0.144377!10161-103A8;0.935091!12131-128D7;0.895054!10624-108H3;0.680311!10712-109I1;0.333146!10205-103F7;0.359466!10206-103F8;0.107063!10207-103F9;0.284468!10050-101G5;0.136718!10051-101G6;0.112619!10016-101C7;0.224362!10046-101G1;0.0509112!10778-110G4;0.349325!10633-108I3;0.400453!10818-111B8;0.519401!10819-111B9;0.978303!10820-111C1;0.906266!10484-107A7;0.90243!10808-111A7;0.112848!10169-103B7;0.0881172!10153-102I9;0.937999!13425-144D5;0.866711!13433-144E4;0.794563!13437-144E8;0.78648!11904-125F5;0.895257!11905-125F6;0.756297!10039-101F3;0.277742!10791-110H8;0.877343!10017-101C8;0.543689!10045-101F9;0.0446837!10509-107D5;0.173167!10839-111E2;0.345367!10692-109F8;0.439495!10079-102A7;0.361531!10078-102A6;0.203163!10721-110A1;0.0945125!10569-108B2;0.322915!10570-108B3;0.555589!10571-108B4;0.268757!10647-109A8;0.294231!10752-110D5;0.868748!10782-110G8;0.0857251!10726-110A6;0.315255!10018-101C9;0.265894!10086-102B5;0.024119!10182-103D2;0.126265!10165-103B3;0.86574!10499-107C4;0.945566!10408-106B3;0.550677!10019-101D1;0.319734!10068-101I5;0.0149959!10075-102A3;0.0955413!10077-102A5;0.0208628!10727-110A7;0.212412!10775-110G1;0.726163!10412-106B7;0.442762!12231-129F8;0.618554!12232-129F9;0.112342!12233-129G1;0.0470622!12234-129G2;0.0500399!10414-106B9;0.0740675!10170-103B8;0.510733!10183-103D3;0.987184!10150-102I6;0.89141!10174-103C3;0.887246!10155-103A2;0.730581!10038-101F2;0.770381!10838-111E1;0.92354!10759-110E3;0.685055!10514-107E1;0.850134!10465-106H6;0.941188!10691-109F7;0.16357!10843-111E6;0.23716!10844-111E7;0.279689!11747-123G1;0.12341!11748-123G2;0.20733!11749-123G3;0.288506!11750-123G4;0.3372!11751-123G5;0.452114!11840-124H4;0.643531!11752-123G6;0.967272!11753-123G7;0.362991!11754-123G8;0.783087!11755-123G9;0.270716!11756-123H1;0.637855!11833-124G6;0.698745!11760-123H5;0.288373!11836-124G9;0.918786!11758-123H3;0.400797!11835-124G8;0.772861!11762-123H7;0.728846!11838-124H2;0.594977!11757-123H2;0.459136!11759-123H4;0.441797!11761-123H6;0.187169!11842-124H6;0.439647!11837-124H1;0.890459!10568-108B1;0.674717!13230-141I8;0.247407!13231-141I9;0.332332!10696-109G3;0.429823!10493-107B7;0.11807!10494-107B8;0.412181!10850-111F4;0.180589!10851-111F5;0.500308!10852-111F6;0.658794!10853-111F7;0.432216!10854-111F8;0.916476!10855-111F9;0.212303!10856-111G1;0.656937!10847-111F1;0.231917!10846-111E9;0.667674!10848-111F2;0.494977!10845-111E8;0.912108!10857-111G2;0.526147!10858-111G3;0.869527!10156-103A3;0.656171!11901-125F2;0.912577!11902-125F3;0.734998!11903-125F4;0.31948!10689-109F5;0.549032!10648-109A9;0.545066!10784-110H1;0.237725!10744-110C6;0.431223!10772-110F7;0.864779!10474-106I6;0.0486675!10600-108E6;0.520864!10684-109E9;0.207217!12226-129F3;0.317508!12227-129F4;0.651841!10508-107D4;0.73667!10539-107G8;0.115729!10607-108F4;0.313954!10555-107I6;0.0859211!10774-110F9;0.042483!10637-108I7;0.0853441!10663-109C6;0.212577!10728-110A8;0.241388!10729-110A9;0.574595!10430-106D7;0.555667!10730-110B1;0.360836!10813-111B3;0.289227!10812-111B2;0.961725!10037-101F1;0.0914728!10172-103C1;0.898441!10163-103B1;0.804542!10076-102A4;0.885187!10073-102A1;0.925623!10036-101E9;0.54006!10195-103E6;0.978521!10277-104E7;0.951288!10434-106E2;0.523705!10550-107I1;0.255661!10545-107H5;0.788044!10544-107H4;0.467262!10704-109H2;0.675408!10510-107D6;0.346804!10558-107I9;0.711914!10020-101D2;0.758055!10732-110B3;0.333152!10049-101G4;0.0438434!10698-109G5;0.0980904!10437-106E5;0.693936!10417-106C3;0.944946!10035-101E8;0.265127!10171-103B9;0.950327!10157-103A4;0.835422!10034-101E7;0.91758!10072-101I9;0.972985!10199-103F1;0.539989!10200-103F2;0.346175!10697-109G4;0.358742!10723-110A3;0.0996797!10179-103C8;0.213704!10160-103A7;0.970648!10180-103C9;0.937086!10162-103A9;0.976984!10021-101D3;0.78584!10840-111E3;0.383927!10706-109H4;0.113811!10033-101E6;0.0285919!10032-101E5;0.779073!10490-107B4;0.902463!10439-106E7;0.965944!10022-101D4;0.502383!10176-103C5;0.041551!10469-106I1;0.827656!10067-101I4;0.577075!10411-106B6;0.39934!10471-106I3;0.0772643!10030-101E3;0.79727!10475-106I7;0.378473!10787-110H4;0.114612!10477-106I9;0.408427!10695-109G2;0.0967184!11771-123I7;0.195317!11772-123I8;0.105085!11773-123I9;0.0177463!10093-102C3;0.0624267!10442-106F1;0.243099!10442-106F1;0.00147732!10201-103F3;0.00374354!10639-108I9;0.0795778!11843-124H7;0.0152869!11841-124H5;0.160863!10693-109F9;0.963046!10436-106E4;0.189799!10483-107A6;0.416708!10282-104F3;0.0952648!10023-101D5;0.906244!10066-101I3;0.553843!10065-101I2;0.923664!10800-110I8;0.635045!10610-108F7;0.708033!10841-111E4;0.587411!10541-107H1;0.0956478!10842-111E5;0.589305!10562-108A4;0.416407!10024-101D6;0.682134!10064-101I1;0.0079105!10609-108F6;0.101813!10048-101G3;0.740061!10781-110G7;0.2713!10181-103D1;0.851391!10159-103A6;0.785498!10056-101H2;0.834569!10737-110B8;0.930494!10025-101D7;0.917538!10044-101F8;0.204544!10424-106D1;0.255975!10463-106H4;0.195958!10616-108G4;0.612707!10486-107A9;0.73841!10062-101H8;0.643545!10202-103F4;0.100713!10158-103A5;0.28068!10441-106E9;0.905508!10031-101E4;0.249531!10063-101H9;0.942847!10063-101H9;0.579773!11763-123H8;0.267738!11765-123I1;0.920542!11768-123I4;0.738382!10807-111A6;0.874718!10790-110H7;0.880551!10798-110I6;0.67156!10786-110H3;0.605285!10591-108D6;0.258433!10593-108D8;0.56349!10590-108D5;0.360505!10026-101D8;0.92042!10096-102C6;0.903919!10168-103B6;0.333935!10154-103A1;0.882022!10209-103G2;0.96792!10061-101H7;0.37836!10027-101D9;0.547973!10043-101F7;0.34133!10783-110G9;0.525219!10028-101E1;0.303629!10060-101H6;0.0235661!10203-103F5;0.333992!10059-101H5;0.271167!10047-101G2;0.659686!10029-101E2;0.094814!10058-101H4;0.0515299!10418-106C4;0.196352!10492-107B6;0.521237!10694-109G1;0.00364184!10797-110I5;0.749525!10057-101H3;0.29659!10100-102D1;0.557324!10055-101H1;0.238858!10204-103F6;0.373888!10191-103E2;0.0077264!10563-108A5;0.519097 | ||
|name=CNhs11828_bu_f0 | |name=CNhs11828_bu_f0 | ||
|tomtom_result=SP1#MA0079.2;-2;2.91069e-05;0.0138549;0.0276735;10;GGGGGGGAGGGA;GGGGGCGGGG;-!YGR067C#MA0425.1;1;0.0011835;0.563348;0.377822;12;GGGGGGGAGGGA;TGAAAAAGTGGGGT;-!SP1#MA0079.2;-3;0.00141059;0.671439;0.377822;9;GGGGGGGAGGGA;GGGGCGGGGT;+!btd#MA0443.1;-1;0.00167897;0.799189;0.377822;10;GGGGGGGAGGGA;AGGGGGCGGA;+!Pax4#MA0068.1;1;0.00198696;0.945794;0.377822;12;GGGGGGGAGGGA;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!Klf4#MA0039.2;-1;0.00452958;2.15608;0.717752;10;GGGGGGGAGGGA;TAAAGGAAGG;+!hkb#MA0450.1;-3;0.00596209;2.83795;0.809782;9;GGGGGGGAGGGA;GGGGCGTGA;+!GAL4#MA0299.1;1;0.00885539;4.21517;0.873862;12;GGGGGGGAGGGA;CGGGGAACAGTACTC;+!Egr1#MA0162.1;1;0.00897265;4.27098;0.873862;10;GGGGGGGAGGGA;TGCGTGGGCGT;+!UGA3#MA0410.1;-4;0.0100845;4.80024;0.873862;8;GGGGGGGAGGGA;CGGCGGGA;+!MZF1_1-4#MA0056.1;-2;0.0101104;4.81254;0.873862;6;GGGGGGGAGGGA;TGGGGA;+!Klf4#MA0039.2;-3;0.0149437;7.11322;0.998691;9;GGGGGGGAGGGA;TGGGTGGGGC;+!MZF1_5-13#MA0057.1;-5;0.0172006;8.1875;0.998691;7;GGGGGGGAGGGA;GGAGGGGGAA;+!YML081W#MA0431.1;-4;0.0174513;8.30682;0.998691;8;GGGGGGGAGGGA;GTGCGGGGT;-!CRZ1#MA0285.1;-3;0.0201821;9.60666;0.998691;9;GGGGGGGAGGGA;GTGGCTTAG;-!NHP10#MA0344.1;0;0.0206812;9.84427;0.998691;8;GGGGGGGAGGGA;GCCGGGGA;+ | |||
}} | }} |
Latest revision as of 13:47, 7 September 2012
Full Name: CNhs11828_bu_f0
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
SP1#MA0079.2 | -2 | 2.91069e-05 | 0.0138549 | 0.0276735 | 10 | GGGGGGGAGGGA | GGGGGCGGGG | - |
YGR067C#MA0425.1 | 1 | 0.0011835 | 0.563348 | 0.377822 | 12 | GGGGGGGAGGGA | TGAAAAAGTGGGGT | - |
SP1#MA0079.2 | -3 | 0.00141059 | 0.671439 | 0.377822 | 9 | GGGGGGGAGGGA | GGGGCGGGGT | + |
btd#MA0443.1 | -1 | 0.00167897 | 0.799189 | 0.377822 | 10 | GGGGGGGAGGGA | AGGGGGCGGA | + |
Pax4#MA0068.1 | 1 | 0.00198696 | 0.945794 | 0.377822 | 12 | GGGGGGGAGGGA | GGGGGGGGAGTGGAGTATTGGAAATTTTTC | - |
Klf4#MA0039.2 | -1 | 0.00452958 | 2.15608 | 0.717752 | 10 | GGGGGGGAGGGA | TAAAGGAAGG | + |
hkb#MA0450.1 | -3 | 0.00596209 | 2.83795 | 0.809782 | 9 | GGGGGGGAGGGA | GGGGCGTGA | + |
GAL4#MA0299.1 | 1 | 0.00885539 | 4.21517 | 0.873862 | 12 | GGGGGGGAGGGA | CGGGGAACAGTACTC | + |
Egr1#MA0162.1 | 1 | 0.00897265 | 4.27098 | 0.873862 | 10 | GGGGGGGAGGGA | TGCGTGGGCGT | + |
UGA3#MA0410.1 | -4 | 0.0100845 | 4.80024 | 0.873862 | 8 | GGGGGGGAGGGA | CGGCGGGA | + |
MZF1_1-4#MA0056.1 | -2 | 0.0101104 | 4.81254 | 0.873862 | 6 | GGGGGGGAGGGA | TGGGGA | + |
Klf4#MA0039.2 | -3 | 0.0149437 | 7.11322 | 0.998691 | 9 | GGGGGGGAGGGA | TGGGTGGGGC | + |
MZF1_5-13#MA0057.1 | -5 | 0.0172006 | 8.1875 | 0.998691 | 7 | GGGGGGGAGGGA | GGAGGGGGAA | + |
YML081W#MA0431.1 | -4 | 0.0174513 | 8.30682 | 0.998691 | 8 | GGGGGGGAGGGA | GTGCGGGGT | - |
CRZ1#MA0285.1 | -3 | 0.0201821 | 9.60666 | 0.998691 | 9 | GGGGGGGAGGGA | GTGGCTTAG | - |
NHP10#MA0344.1 | 0 | 0.0206812 | 9.84427 | 0.998691 | 8 | GGGGGGGAGGGA | GCCGGGGA | + |