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MacroAPE 1083:Motif486: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;79175;0;0!02;79175;0;0;0!03;11602;34936;32637;0!04;43722;10251;0;25202!05;0;0;79175;0!06;0;79175;0;0!07;0;0;0;79175 |macroape_1083_sampl...")
 
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574538!10827-111C8;0.729238!10789-110H6;0.521115!10828-111C9;0.316576!10788-110H5;0.457014!10792-110H9;0.117619!10765-110E9;0.44428!10829-111D1;0.32173!10830-111D2;0.251648!10831-111D3;0.0739669!10832-111D4;0.0467664!10833-111D5;0.299685!10764-110E8;0.100424!10770-110F5;0.180911!10399-106A3;0.952904!10400-106A4;0.145558!10405-106A9;0.154993!10834-111D6;0.177649!10835-111D7;0.497664!10836-111D8;0.349336!10837-111D9;0.310772!10699-109G6;0.128749!10802-111A1;0.115825!10796-110I4;0.0740886!10010-101C1;0.029471!10810-111A9;0.208393!10421-106C7;0.0184059!10708-109H6;0.876351!12235-129G3;0.0533857!12236-129G4;0.635266!12237-129G5;0.547954!10167-103B5;0.716363!10151-102I7;0.0507219!10428-106D5;0.0295793!10795-110I3;0.208601!10805-111A4;0.401978!10052-101G7;0.0477314!10189-103D9;0.107544!10589-108D4;0.0664565!10425-106D2;0.0105055!10427-106D4;0.373236!10702-109G9;0.990711!10432-106D9;0.232821!10496-107C1;0.023915!10718-109I7;0.117329!10011-101C2;0.229254!10053-101G8;0.0753028!10686-109F2;0.258733!10084-102B3;0.636219!10012-101C3;0.0462042!10085-102B4;0.0263182!10482-107A5;0.273582!10419-106C5;0.123719!10080-102A8;0.0129495!10760-110E4;0.479597!10709-109H7;0.0705072!10710-109H8;0.087854!10703-109H1;0.087501!10719-109I8;0.120313!10642-109A3;0.253665!10177-103C6;0.156969!10164-103B2;0.0359845!10173-103C2;0.063253!10166-103B4;0.105454!10083-102B2;0.183932!10188-103D8;0.0981488!10552-107I3;0.0462957!10553-107I4;0.0268985!10013-101C4;0.0878338!10536-107G5;0.216553!10618-108G6;0.0166325!10423-106C9;0.169301!10785-110H2;0.323332!12238-129G6;0.0451726!12239-129G7;0.642179!12240-129G8;0.775317!10416-106C2;0.899765!10801-110I9;0.915018!10766-110F1;0.284782!10824-111C5;0.0904472!10825-111C6;0.056468!10826-111C7;0.0448305!10454-106G4;0.0687559!10409-106B4;0.0405669!10638-108I8;0.0811618!10636-108I6;0.00427482!10513-107D9;0.0115219!10420-106C6;0.0219223!10082-102B1;0.0161704!10014-101C5;0.275525!10070-101I7;0.375606!10452-106G2;0.271281!10453-106G3;0.406999!10449-106F8;0.339372!10042-101F6;0.34946!10069-101I6;0.0242888!10193-103E4;0.318835!10631-108I1;0.0326063!10438-106E6;0.248106!10488-107B2;0.120824!10196-103E7;0.0294482!10071-101I8;0.698572!10071-101I8;0.297394!10041-101F5;0.153772!10451-106G1;0.0459689!10450-106F9;0.0189439!10604-108F1;0.0553705!10605-108F2;0.0223521!10606-108F3;0.00847063!10603-108E9;0.0222379!10497-107C2;0.0216581!10448-106F7;0.00548469!10643-109A4;0.071454!10426-106D3;0.0893733!10431-106D8;0.173073!10197-103E8;0.0243456!10443-106F2;0.387792!10815-111B5;0.235352!10816-111B6;0.0134971!10817-111B7;0.00726777!10015-101C6;0.00885442!10410-106B5;0.240974!10054-101G9;0.035125!10758-110E2;0.0848948!10711-109H9;0.0654087!10040-101F4;0.213681!10470-106I2;0.0341716!10415-106C1;0.0487927!10198-103E9;0.0189897!10614-108G2;0.400831!10612-108F9;0.0315969!10549-107H9;0.0137807!10615-108G3;0.0488196!10487-107B1;0.00171414!10433-106E1;0.0273908!10688-109F4;0.116385!10444-106F3;0.0580618!10444-106F3;0.235357!10485-107A8;0.255197!10413-106B8;0.397104!10175-103C4;0.0523014!10161-103A8;0.0184553!12131-128D7;0.0335094!10624-108H3;0.103193!10712-109I1;0.365241!10205-103F7;0.937412!10206-103F8;0.242567!10207-103F9;0.242725!10050-101G5;0.64285!10051-101G6;0.666156!10016-101C7;0.420721!10046-101G1;0.514907!10778-110G4;0.266894!10633-108I3;0.321282!10818-111B8;0.0771155!10819-111B9;0.00182001!10820-111C1;0.00225343!10484-107A7;0.00198071!10808-111A7;0.000490813!10169-103B7;0.402999!10153-102I9;0.0213388!13425-144D5;0.0386507!13433-144E4;0.689327!13437-144E8;0.518888!11904-125F5;0.810141!11905-125F6;0.584152!10039-101F3;0.874246!10791-110H8;0.0367347!10017-101C8;0.0773959!10045-101F9;0.555477!10509-107D5;0.444128!10839-111E2;0.0210534!10692-109F8;0.416232!10079-102A7;0.107142!10078-102A6;0.236009!10721-110A1;0.303547!10569-108B2;0.0698072!10570-108B3;0.850657!10571-108B4;0.646199!10647-109A8;0.571255!10752-110D5;0.15649!10782-110G8;0.0224279!10726-110A6;0.812092!10018-101C9;0.0484646!10086-102B5;0.878385!10182-103D2;0.273924!10165-103B3;0.0297641!10499-107C4;0.0284396!10408-106B3;0.00178794!10019-101D1;0.345037!10068-101I5;0.178828!10075-102A3;0.218901!10077-102A5;0.349254!10727-110A7;0.0121168!10775-110G1;0.685152!10412-106B7;0.41328!12231-129F8;0.27399!12232-129F9;0.628296!12233-129G1;0.337205!12234-129G2;0.348667!10414-106B9;0.63903!10170-103B8;0.115503!10183-103D3;0.0497849!10150-102I6;0.0462597!10174-103C3;0.0425301!10155-103A2;0.0496339!10038-101F2;0.0253467!10838-111E1;0.0288079!10759-110E3;0.0193225!10514-107E1;0.713072!10465-106H6;0.0214058!10691-109F7;0.00134672!10843-111E6;0.0345621!10844-111E7;0.0901571!11747-123G1;0.227852!11748-123G2;0.374171!11749-123G3;0.239493!11750-123G4;0.359859!11751-123G5;0.475519!11840-124H4;0.877899!11752-123G6;0.893989!11753-123G7;0.80851!11754-123G8;0.977575!11755-123G9;0.55465!11756-123H1;0.957171!11833-124G6;0.99746!11760-123H5;0.652989!11836-124G9;0.935966!11758-123H3;0.413503!11835-124G8;0.742199!11762-123H7;0.929593!11838-124H2;0.705149!11757-123H2;0.903391!11759-123H4;0.279473!11761-123H6;0.611557!11842-124H6;0.814278!11837-124H1;0.786236!10568-108B1;0.749113!13230-141I8;0.80283!13231-141I9;0.0909563!10696-109G3;0.1286!10493-107B7;0.953033!10494-107B8;0.0486008!10850-111F4;0.205422!10851-111F5;0.0695946!10852-111F6;0.634824!10853-111F7;0.36514!10854-111F8;0.00930082!10855-111F9;0.215427!10856-111G1;0.433338!10847-111F1;0.251535!10846-111E9;0.0874882!10848-111F2;0.0564229!10845-111E8;0.0606208!10857-111G2;0.0476977!10858-111G3;0.195428!10156-103A3;0.386565!11901-125F2;0.0380428!11902-125F3;0.561961!11903-125F4;0.840308!10689-109F5;0.741609!10648-109A9;0.00604938!10784-110H1;0.00144885!10744-110C6;0.0753537!10772-110F7;0.489991!10474-106I6;0.237854!10600-108E6;0.50244!10684-109E9;0.889486!12226-129F3;0.283861!12227-129F4;0.494269!10508-107D4;0.0572966!10539-107G8;0.244087!10607-108F4;0.401007!10555-107I6;0.531942!10774-110F9;0.666356!10637-108I7;0.248474!10663-109C6;0.749716!10728-110A8;0.709877!10729-110A9;0.368622!10430-106D7;0.120277!10730-110B1;0.252512!10813-111B3;0.0451134!10812-111B2;0.659228!10037-101F1;0.721461!10172-103C1;0.039594!10163-103B1;0.0541047!10076-102A4;0.0497546!10073-102A1;0.0430035!10036-101E9;0.401496!10195-103E6;0.0490118!10277-104E7;0.0344166!10434-106E2;0.0542909!10550-107I1;0.213943!10545-107H5;0.0826692!10544-107H4;0.355405!10704-109H2;0.150547!10510-107D6;0.6293!10558-107I9;0.0788612!10020-101D2;0.164059!10732-110B3;0.211443!10049-101G4;0.757034!10698-109G5;0.841577!10437-106E5;0.112671!10417-106C3;0.0773793!10035-101E8;0.0423811!10171-103B9;0.0428189!10157-103A4;0.0312513!10034-101E7;0.0475401!10072-101I9;0.0357398!10199-103F1;0.321591!10200-103F2;0.513325!10697-109G4;0.332726!10723-110A3;0.41532!10179-103C8;0.0846337!10160-103A7;0.204618!10180-103C9;0.272388!10162-103A9;0.348332!10021-101D3;0.407634!10840-111E3;0.517027!10706-109H4;0.408204!10033-101E6;0.508289!10032-101E5;0.0403514!10490-107B4;0.0482452!10439-106E7;0.0144544!10022-101D4;0.0160882!10176-103C5;0.235926!10469-106I1;0.0322316!10067-101I4;0.0790085!10411-106B6;0.471628!10471-106I3;0.0175843!10030-101E3;0.00159606!10475-106I7;0.0413276!10787-110H4;0.0493804!10477-106I9;0.0909009!10695-109G2;0.365851!11771-123I7;0.667182!11772-123I8;0.0521182!11773-123I9;0.372745!10093-102C3;0.512495!10442-106F1;0.555317!10442-106F1;0.153748!10201-103F3;0.165417!10639-108I9;0.250653!11843-124H7;0.0898826!11841-124H5;0.0180504!10693-109F9;0.487283!10436-106E4;0.00262236!10483-107A6;0.0755339!10282-104F3;0.0609294!10023-101D5;0.975014!10066-101I3;0.766913!10065-101I2;0.388902!10800-110I8;0.15405!10610-108F7;0.0486122!10841-111E4;0.0290513!10541-107H1;0.098602!10842-111E5;0.243786!10562-108A4;0.177869!10024-101D6;0.014485!10064-101I1;0.447257!10609-108F6;0.337264!10048-101G3;0.0347329!10781-110G7;0.175652!10181-103D1;0.249131!10159-103A6;0.0120588!10056-101H2;0.0147981!10737-110B8;0.0288251!10025-101D7;0.42326!10044-101F8;0.0284642!10424-106D1;0.0453437!10463-106H4;0.285808!10616-108G4;0.0847403!10486-107A9;0.196195!10062-101H8;0.0943096!10202-103F4;0.466031!10158-103A5;0.371223!10441-106E9;0.0296601!10031-101E4;0.127646!10063-101H9;0.0337411!10063-101H9;0.317019!11763-123H8;0.165267!11765-123I1;0.645059!11768-123I4;0.409582!10807-111A6;0.412865!10790-110H7;0.287697!10798-110I6;0.414903!10786-110H3;0.181576!10591-108D6;0.285484!10593-108D8;0.362826!10590-108D5;0.195825!10026-101D8;0.21204!10096-102C6;0.490512!10168-103B6;0.632357!10154-103A1;0.0264009!10209-103G2;0.0242066!10061-101H7;0.361336!10027-101D9;0.39592!10043-101F7;0.106871!10783-110G9;0.0230535!10028-101E1;0.215581!10060-101H6;0.995965!10203-103F5;0.632341!10059-101H5;0.566701!10047-101G2;0.504337!10029-101E2;0.219247!10058-101H4;0.315903!10418-106C4;0.311918!10492-107B6;0.0742867!10694-109G1;0.0403231!10797-110I5;0.774118!10057-101H3;0.0300325!10100-102D1;0.298105!10055-101H1;0.322395!10204-103F6;0.191373!10191-103E2;0.335272!10563-108A5;0.0743194
|name=motif486
|name=motif486
|tomtom_result=MET4#MA0335.1;1;0.00149238;0.710371;1;7;CACAGCT;CCACAGTT;-!NHLH1#MA0048.1;1;0.0113783;5.41606;1;7;CACAGCT;ACGCAGCTGCGC;-!T#MA0009.1;2;0.0180082;8.57189;1;7;CACAGCT;TTCACACCTAG;-!MET28#MA0332.1;1;0.0182024;8.66436;1;5;CACAGCT;CCACAG;-!Pax5#MA0014.1;11;0.0194624;9.2641;1;7;CACAGCT;CCGCTACGCTTCAGTGCTCT;-!TOD6#MA0350.1;3;0.0208263;9.91332;1;7;CACAGCT;AGGCACAGCTCATCGCGTTTT;+
}}
}}

Latest revision as of 13:47, 7 September 2012

Full Name: motif486

Motif matrix
POACGT
0107917500
0279175000
031160234936326370
044372210251025202
0500791750
0607917500
0700079175

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
MET4#MA0335.110.001492380.71037117CACAGCTCCACAGTT-
NHLH1#MA0048.110.01137835.4160617CACAGCTACGCAGCTGCGC-
T#MA0009.120.01800828.5718917CACAGCTTTCACACCTAG-
MET28#MA0332.110.01820248.6643615CACAGCTCCACAG-
Pax5#MA0014.1110.01946249.264117CACAGCTCCGCTACGCTTCAGTGCTCT-
TOD6#MA0350.130.02082639.9133217CACAGCTAGGCACAGCTCATCGCGTTTT+
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