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MacroAPE 1083:Motif563: Difference between revisions

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.599237!10464-106H5;0.982895!10827-111C8;0.668829!10789-110H6;0.913925!10828-111C9;0.101386!10788-110H5;0.182774!10792-110H9;0.275365!10765-110E9;0.754479!10829-111D1;0.465246!10830-111D2;0.482853!10831-111D3;0.83631!10832-111D4;0.655396!10833-111D5;0.982265!10764-110E8;0.529918!10770-110F5;0.0923452!10399-106A3;0.0230358!10400-106A4;0.955564!10405-106A9;0.632649!10834-111D6;0.765175!10835-111D7;0.426124!10836-111D8;0.347449!10837-111D9;0.868066!10699-109G6;0.403726!10802-111A1;0.875041!10796-110I4;0.674632!10010-101C1;0.0729059!10810-111A9;0.0884092!10421-106C7;0.52285!10708-109H6;0.0142198!12235-129G3;0.230329!12236-129G4;0.0429517!12237-129G5;0.589444!10167-103B5;0.0354853!10151-102I7;0.380666!10428-106D5;0.349511!10795-110I3;0.783348!10805-111A4;0.183672!10052-101G7;0.43142!10189-103D9;0.143237!10589-108D4;0.431329!10425-106D2;0.361569!10427-106D4;0.4093!10702-109G9;0.8592!10432-106D9;0.969808!10496-107C1;0.0370891!10718-109I7;0.980167!10011-101C2;0.202653!10053-101G8;0.211216!10686-109F2;0.40202!10084-102B3;0.467954!10012-101C3;0.359018!10085-102B4;0.278282!10482-107A5;0.467606!10419-106C5;0.446502!10080-102A8;0.00470962!10760-110E4;0.621195!10709-109H7;0.179893!10710-109H8;0.00663235!10703-109H1;0.0278666!10719-109I8;0.33675!10642-109A3;0.621551!10177-103C6;0.696054!10164-103B2;0.379669!10173-103C2;0.41713!10166-103B4;0.477394!10083-102B2;0.382871!10188-103D8;0.366911!10552-107I3;0.249379!10553-107I4;0.977089!10013-101C4;0.0920463!10536-107G5;0.138391!10618-108G6;0.626546!10423-106C9;0.0401634!10785-110H2;0.00161025!12238-129G6;0.0077985!12239-129G7;0.408939!12240-129G8;0.265291!10416-106C2;0.999991!10801-110I9;0.469763!10766-110F1;0.414936!10824-111C5;0.4458!10825-111C6;0.0643669!10826-111C7;0.0574597!10454-106G4;0.100446!10409-106B4;0.306259!10638-108I8;0.283223!10636-108I6;0.211363!10513-107D9;0.0875459!10420-106C6;0.0261089!10082-102B1;0.911362!10014-101C5;0.970654!10070-101I7;0.873354!10452-106G2;0.335378!10453-106G3;0.920189!10449-106F8;0.931965!10042-101F6;0.921807!10069-101I6;0.252418!10193-103E4;0.0213635!10631-108I1;0.365047!10438-106E6;0.97891!10488-107B2;0.0230607!10196-103E7;0.11091!10071-101I8;0.397934!10071-101I8;0.245867!10041-101F5;0.344815!10451-106G1;0.00416752!10450-106F9;0.909393!10604-108F1;0.794332!10605-108F2;0.159998!10606-108F3;0.0849274!10603-108E9;0.291868!10497-107C2;0.233331!10448-106F7;0.0140043!10643-109A4;0.0324958!10426-106D3;0.0100693!10431-106D8;0.00464838!10197-103E8;0.0343881!10443-106F2;0.19151!10815-111B5;0.0287919!10816-111B6;0.488597!10817-111B7;0.708873!10015-101C6;0.469169!10410-106B5;0.776261!10054-101G9;0.970968!10758-110E2;0.0339102!10711-109H9;0.350577!10040-101F4;0.356809!10470-106I2;0.36138!10415-106C1;0.0343933!10198-103E9;0.0283643!10614-108G2;0.500751!10612-108F9;0.0128046!10549-107H9;0.511123!10615-108G3;0.747711!10487-107B1;0.755664!10433-106E1;0.626739!10688-109F4;0.0507266!10444-106F3;0.133177!10444-106F3;0.790628!10485-107A8;0.825811!10413-106B8;0.413114!10175-103C4;0.287958!10161-103A8;0.535887!12131-128D7;0.290836!10624-108H3;0.380092!10712-109I1;0.461162!10205-103F7;0.028656!10206-103F8;0.0165604!10207-103F9;0.0152219!10050-101G5;0.00252433!10051-101G6;0.657264!10016-101C7;0.120666!10046-101G1;0.0705672!10778-110G4;0.00923558!10633-108I3;0.192854!10818-111B8;0.443155!10819-111B9;0.459924!10820-111C1;0.475246!10484-107A7;0.502456!10808-111A7;0.793524!10169-103B7;0.650736!10153-102I9;0.377041!13425-144D5;0.310843!13433-144E4;0.0493875!13437-144E8;0.0894475!11904-125F5;0.0972844!11905-125F6;0.00234385!10039-101F3;0.000274299!10791-110H8;0.372391!10017-101C8;0.040364!10045-101F9;0.813749!10509-107D5;0.192418!10839-111E2;0.895481!10692-109F8;0.934509!10079-102A7;0.0758317!10078-102A6;0.0363473!10721-110A1;0.0727399!10569-108B2;0.16956!10570-108B3;0.922908!10571-108B4;0.941042!10647-109A8;0.517905!10752-110D5;0.354937!10782-110G8;0.806436!10726-110A6;0.135347!10018-101C9;0.27902!10086-102B5;0.951828!10182-103D2;0.787515!10165-103B3;0.394965!10499-107C4;0.314925!10408-106B3;0.329086!10019-101D1;0.00665057!10068-101I5;0.788877!10075-102A3;0.286764!10077-102A5;0.608468!10727-110A7;0.27943!10775-110G1;0.142247!10412-106B7;0.356526!12231-129F8;0.517532!12232-129F9;0.690457!12233-129G1;0.977126!12234-129G2;0.769589!10414-106B9;0.555395!10170-103B8;0.464713!10183-103D3;0.419726!10150-102I6;0.367755!10174-103C3;0.362688!10155-103A2;0.290283!10038-101F2;0.239724!10838-111E1;0.245411!10759-110E3;0.830075!10514-107E1;0.4643!10465-106H6;0.258403!10691-109F7;0.412436!10843-111E6;0.302289!10844-111E7;0.868929!11747-123G1;0.989592!11748-123G2;0.185657!11749-123G3;0.0608741!11750-123G4;0.258067!11751-123G5;0.0247048!11840-124H4;0.014754!11752-123G6;0.358286!11753-123G7;0.549578!11754-123G8;0.0237222!11755-123G9;0.106591!11756-123H1;0.195705!11833-124G6;0.154329!11760-123H5;0.298581!11836-124G9;0.0878533!11758-123H3;0.246147!11835-124G8;0.516436!11762-123H7;0.462197!11838-124H2;0.779599!11757-123H2;0.688665!11759-123H4;0.458806!11761-123H6;0.0262433!11842-124H6;0.636642!11837-124H1;0.483497!10568-108B1;0.0495316!13230-141I8;0.504892!13231-141I9;0.0982872!10696-109G3;0.0877121!10493-107B7;0.0910705!10494-107B8;0.0145376!10850-111F4;0.657116!10851-111F5;0.118769!10852-111F6;0.50074!10853-111F7;0.0962634!10854-111F8;0.878917!10855-111F9;0.126205!10856-111G1;0.467673!10847-111F1;0.673891!10846-111E9;0.423805!10848-111F2;0.949882!10845-111E8;0.996674!10857-111G2;0.735008!10858-111G3;0.729817!10156-103A3;0.212419!11901-125F2;0.372115!11902-125F3;5.13051e-07!11903-125F4;1.60119e-06!10689-109F5;3.74287e-07!10648-109A9;0.992689!10784-110H1;0.364989!10744-110C6;0.176672!10772-110F7;0.158194!10474-106I6;0.402923!10600-108E6;0.431923!10684-109E9;0.287006!12226-129F3;0.716618!12227-129F4;0.00502336!10508-107D4;0.878748!10539-107G8;0.328329!10607-108F4;0.243489!10555-107I6;0.692397!10774-110F9;0.310257!10637-108I7;0.461458!10663-109C6;0.398174!10728-110A8;0.567264!10729-110A9;0.925876!10430-106D7;0.0636507!10730-110B1;0.774406!10813-111B3;0.711216!10812-111B2;0.00709849!10037-101F1;0.593437!10172-103C1;0.378118!10163-103B1;0.360473!10076-102A4;0.367293!10073-102A1;0.311726!10036-101E9;0.419937!10195-103E6;0.357141!10277-104E7;0.317801!10434-106E2;0.295909!10550-107I1;0.00387943!10545-107H5;0.0664073!10544-107H4;0.0551046!10704-109H2;0.598459!10510-107D6;0.14814!10558-107I9;0.453722!10020-101D2;0.525637!10732-110B3;0.0147981!10049-101G4;0.714305!10698-109G5;0.734025!10437-106E5;0.0271919!10417-106C3;0.426553!10035-101E8;0.0369076!10171-103B9;0.384202!10157-103A4;0.388724!10034-101E7;0.384295!10072-101I9;0.394916!10199-103F1;0.374209!10200-103F2;0.789533!10697-109G4;0.124092!10723-110A3;0.41083!10179-103C8;0.434035!10160-103A7;0.128024!10180-103C9;0.131392!10162-103A9;0.347675!10021-101D3;0.511194!10840-111E3;0.418734!10706-109H4;0.479511!10033-101E6;0.231243!10032-101E5;0.436097!10490-107B4;0.342351!10439-106E7;0.0293013!10022-101D4;0.0140668!10176-103C5;0.267553!10469-106I1;0.417045!10067-101I4;0.00165553!10411-106B6;0.125927!10471-106I3;0.00412971!10030-101E3;0.00189605!10475-106I7;0.0482359!10787-110H4;0.845512!10477-106I9;0.773674!10695-109G2;0.061298!11771-123I7;0.0067637!11772-123I8;0.0679711!11773-123I9;0.0875456!10093-102C3;0.240133!10442-106F1;0.815906!10442-106F1;0.566114!10201-103F3;0.464196!10639-108I9;0.189989!11843-124H7;0.0322358!11841-124H5;0.0283694!10693-109F9;0.0214781!10436-106E4;0.00809585!10483-107A6;0.0307481!10282-104F3;0.0213899!10023-101D5;0.0224768!10066-101I3;0.034134!10065-101I2;0.0208187!10800-110I8;0.0900684!10610-108F7;0.844319!10841-111E4;0.250524!10541-107H1;0.937358!10842-111E5;0.711229!10562-108A4;0.839655!10024-101D6;0.7083!10064-101I1;0.571217!10609-108F6;0.279062!10048-101G3;0.374982!10781-110G7;0.0469473!10181-103D1;0.955668!10159-103A6;0.188079!10056-101H2;0.17855!10737-110B8;0.0408606!10025-101D7;0.0214019!10044-101F8;0.248862!10424-106D1;0.191157!10463-106H4;0.620281!10616-108G4;0.089083!10486-107A9;0.033839!10062-101H8;0.0450607!10202-103F4;0.148069!10158-103A5;0.463153!10441-106E9;0.215731!10031-101E4;0.635902!10063-101H9;0.348568!10063-101H9;0.350143!11763-123H8;0.16749!11765-123I1;0.063049!11768-123I4;0.270181!10807-111A6;0.207677!10790-110H7;0.351477!10798-110I6;0.191762!10786-110H3;0.935854!10591-108D6;0.0130051!10593-108D8;0.0323365!10590-108D5;0.0341897!10026-101D8;0.00131521!10096-102C6;0.0866444!10168-103B6;0.679311!10154-103A1;0.414881!10209-103G2;0.334661!10061-101H7;0.391208!10027-101D9;0.0326455!10043-101F7;0.326016!10783-110G9;0.937613!10028-101E1;0.682036!10060-101H6;0.468097!10203-103F5;0.0173229!10059-101H5;0.431117!10047-101G2;0.143672!10029-101E2;0.94387!10058-101H4;0.548205!10418-106C4;0.0394603!10492-107B6;0.83151!10694-109G1;0.348943!10797-110I5;0.0881565!10057-101H3;0.146931!10100-102D1;0.0660324!10055-101H1;0.0297708!10204-103F6;0.025521!10191-103E2;0.368216!10563-108A5;0.124999
|name=motif563
|name=motif563
|tomtom_result=Klf4#MA0039.2;0;1.78489e-05;0.00849606;0.0167491;8;GCCCCGCC;GCCCCACCCA;-!MIG2#MA0338.1;-1;0.000163632;0.077889;0.0544549;7;GCCCCGCC;CCCCGCA;+!SP1#MA0079.2;-1;0.00019254;0.091649;0.0544549;7;GCCCCGCC;CCCCGCCCCC;+!MIG3#MA0339.1;-1;0.000232122;0.11049;0.0544549;7;GCCCCGCC;CCCCGCA;+!YML081W#MA0431.1;0;0.000356527;0.169707;0.0669119;8;GCCCCGCC;ACCCCGCAC;+!YGR067C#MA0425.1;0;0.000447009;0.212776;0.069911;8;GCCCCGCC;ACCCCACTTTTTTG;+!MIG1#MA0337.1;0;0.000644279;0.306677;0.0863687;7;GCCCCGCC;CCCCCGC;+!CHA4#MA0283.1;0;0.000857571;0.408204;0.0986957;8;GCCCCGCC;TCTCCGCC;-!SUT1#MA0399.1;-1;0.000946586;0.450575;0.0986957;7;GCCCCGCC;CCCCGCG;-!YPR022C#MA0436.1;-1;0.00140266;0.667665;0.131623;7;GCCCCGCC;CCCCACG;+!ZMS1#MA0441.1;1;0.00161152;0.767081;0.137475;8;GCCCCGCC;TTCCCCGCA;+!ADR1#MA0268.1;0;0.00194183;0.924313;0.151849;7;GCCCCGCC;ACCCCAC;+!SP1#MA0079.2;0;0.0023153;1.10208;0.160726;8;GCCCCGCC;ACCCCGCCCC;-!opa#MA0456.1;0;0.00239791;1.14141;0.160726;8;GCCCCGCC;GACCCCCCGCTG;+!NHP10#MA0344.1;0;0.00538873;2.56503;0.337113;8;GCCCCGCC;TCCCCGGC;-!Zfx#MA0146.1;3;0.00599586;2.85403;0.351651;8;GCCCCGCC;CAGGCCTCGGCCCC;-!MZF1_5-13#MA0057.1;2;0.00702471;3.34376;0.381535;8;GCCCCGCC;TTCCCCCTAC;-!RPN4#MA0373.1;-1;0.00751806;3.5786;0.381535;7;GCCCCGCC;CGCCACC;-!MET31#MA0333.1;1;0.00772517;3.67718;0.381535;8;GCCCCGCC;CGCCACACT;-!UGA3#MA0410.1;-1;0.00852339;4.05713;0.386313;7;GCCCCGCC;TCCCGCCG;-!abi4#MA0123.1;2;0.00937868;4.46425;0.386313;8;GCCCCGCC;CGGTGCCCCC;+!STP1#MA0394.1;0;0.00940969;4.47901;0.386313;8;GCCCCGCC;GCGCCGCA;-!MSN2#MA0341.1;-1;0.00946862;4.50706;0.386313;5;GCCCCGCC;CCCCT;-!MSN4#MA0342.1;-1;0.0109172;5.1966;0.409782;5;GCCCCGCC;CCCCT;-!RGM1#MA0366.1;-1;0.0109172;5.1966;0.409782;5;GCCCCGCC;CCCCT;-!brk#MA0213.1;1;0.0125458;5.97178;0.452797;7;GCCCCGCC;GGCGCCAG;-!MZF1_1-4#MA0056.1;0;0.0168667;8.02853;0.5862;6;GCCCCGCC;TCCCCA;-!Pax5#MA0014.1;2;0.0197242;9.38872;0.661031;8;GCCCCGCC;CCGCTACGCTTCAGTGCTCT;-
}}
}}

Latest revision as of 13:51, 7 September 2012

Full Name: motif563

Motif matrix
POACGT
0100913230
0209132300
03681261354863314524
0409132300
0509132300
061983604192029567
0709132300
0854427607635856220

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Klf4#MA0039.201.78489e-050.008496060.01674918GCCCCGCCGCCCCACCCA-
MIG2#MA0338.1-10.0001636320.0778890.05445497GCCCCGCCCCCCGCA+
SP1#MA0079.2-10.000192540.0916490.05445497GCCCCGCCCCCCGCCCCC+
MIG3#MA0339.1-10.0002321220.110490.05445497GCCCCGCCCCCCGCA+
YML081W#MA0431.100.0003565270.1697070.06691198GCCCCGCCACCCCGCAC+
YGR067C#MA0425.100.0004470090.2127760.0699118GCCCCGCCACCCCACTTTTTTG+
MIG1#MA0337.100.0006442790.3066770.08636877GCCCCGCCCCCCCGC+
CHA4#MA0283.100.0008575710.4082040.09869578GCCCCGCCTCTCCGCC-
SUT1#MA0399.1-10.0009465860.4505750.09869577GCCCCGCCCCCCGCG-
YPR022C#MA0436.1-10.001402660.6676650.1316237GCCCCGCCCCCCACG+
ZMS1#MA0441.110.001611520.7670810.1374758GCCCCGCCTTCCCCGCA+
ADR1#MA0268.100.001941830.9243130.1518497GCCCCGCCACCCCAC+
SP1#MA0079.200.00231531.102080.1607268GCCCCGCCACCCCGCCCC-
opa#MA0456.100.002397911.141410.1607268GCCCCGCCGACCCCCCGCTG+
NHP10#MA0344.100.005388732.565030.3371138GCCCCGCCTCCCCGGC-
Zfx#MA0146.130.005995862.854030.3516518GCCCCGCCCAGGCCTCGGCCCC-
MZF1_5-13#MA0057.120.007024713.343760.3815358GCCCCGCCTTCCCCCTAC-
RPN4#MA0373.1-10.007518063.57860.3815357GCCCCGCCCGCCACC-
MET31#MA0333.110.007725173.677180.3815358GCCCCGCCCGCCACACT-
UGA3#MA0410.1-10.008523394.057130.3863137GCCCCGCCTCCCGCCG-
abi4#MA0123.120.009378684.464250.3863138GCCCCGCCCGGTGCCCCC+
STP1#MA0394.100.009409694.479010.3863138GCCCCGCCGCGCCGCA-
MSN2#MA0341.1-10.009468624.507060.3863135GCCCCGCCCCCCT-
MSN4#MA0342.1-10.01091725.19660.4097825GCCCCGCCCCCCT-
RGM1#MA0366.1-10.01091725.19660.4097825GCCCCGCCCCCCT-
brk#MA0213.110.01254585.971780.4527977GCCCCGCCGGCGCCAG-
MZF1_1-4#MA0056.100.01686678.028530.58626GCCCCGCCTCCCCA-
Pax5#MA0014.120.01972429.388720.6610318GCCCCGCCCCGCTACGCTTCAGTGCTCT-
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