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MacroAPE 1083:ZN589 f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;2.5428082191780748;6.241438356164386;4.59760273972602;1.618150684931505!2;0.9246575342465745;2.8767123287671197;9.349315068493155;1.84931506...")
 
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0788-110H5;0.817639!10792-110H9;0.45058!10765-110E9;0.211241!10829-111D1;0.457942!10830-111D2;0.334001!10831-111D3;0.796358!10832-111D4;0.898224!10833-111D5;0.548507!10764-110E8;0.681922!10770-110F5;0.428246!10399-106A3;0.239737!10400-106A4;0.442337!10405-106A9;0.451674!10834-111D6;0.372969!10835-111D7;0.764158!10836-111D8;0.79709!10837-111D9;0.566495!10699-109G6;0.368609!10802-111A1;0.442147!10796-110I4;0.366114!10010-101C1;0.71695!10810-111A9;0.66361!10421-106C7;0.76721!10708-109H6;0.515587!12235-129G3;0.855193!12236-129G4;0.462933!12237-129G5;0.89366!10167-103B5;0.287664!10151-102I7;0.905105!10428-106D5;0.980379!10795-110I3;0.0082261!10805-111A4;0.533455!10052-101G7;0.407465!10189-103D9;0.737131!10589-108D4;0.926764!10425-106D2;0.808906!10427-106D4;0.0901122!10702-109G9;0.627204!10432-106D9;0.525867!10496-107C1;0.873006!10718-109I7;0.473324!10011-101C2;0.460547!10053-101G8;0.552322!10686-109F2;0.513275!10084-102B3;0.251884!10012-101C3;0.777865!10085-102B4;0.792664!10482-107A5;0.844426!10419-106C5;0.315795!10080-102A8;0.754367!10760-110E4;0.183362!10709-109H7;0.663955!10710-109H8;0.46186!10703-109H1;0.36868!10719-109I8;0.776965!10642-109A3;0.959822!10177-103C6;0.987324!10164-103B2;0.688285!10173-103C2;0.925523!10166-103B4;0.623511!10083-102B2;0.59403!10188-103D8;0.447498!10552-107I3;0.709355!10553-107I4;0.976044!10013-101C4;0.165156!10536-107G5;0.571644!10618-108G6;0.0141872!10423-106C9;0.655298!10785-110H2;0.921043!12238-129G6;0.941839!12239-129G7;0.821499!12240-129G8;0.68922!10416-106C2;0.864162!10801-110I9;0.625108!10766-110F1;0.434319!10824-111C5;0.427522!10825-111C6;0.854313!10826-111C7;0.732684!10454-106G4;0.758375!10409-106B4;0.733229!10638-108I8;0.574276!10636-108I6;0.895467!10513-107D9;0.977783!10420-106C6;0.328303!10082-102B1;0.513678!10014-101C5;0.620309!10070-101I7;0.738987!10452-106G2;0.954882!10453-106G3;0.91409!10449-106F8;0.910013!10042-101F6;0.861437!10069-101I6;0.650062!10193-103E4;0.458314!10631-108I1;0.763328!10438-106E6;0.558646!10488-107B2;0.92602!10196-103E7;0.803556!10071-101I8;0.137442!10071-101I8;0.665602!10041-101F5;0.806733!10451-106G1;0.813565!10450-106F9;0.839775!10604-108F1;0.675987!10605-108F2;0.319002!10606-108F3;0.174717!10603-108E9;0.231515!10497-107C2;0.729727!10448-106F7;0.581005!10643-109A4;0.433499!10426-106D3;0.336075!10431-106D8;0.983963!10197-103E8;0.742392!10443-106F2;0.528896!10815-111B5;0.457285!10816-111B6;0.875467!10817-111B7;0.723596!10015-101C6;0.7695!10410-106B5;0.492793!10054-101G9;0.314839!10758-110E2;0.549706!10711-109H9;0.330331!10040-101F4;0.408866!10470-106I2;0.854253!10415-106C1;0.381561!10198-103E9;0.380957!10614-108G2;0.787739!10612-108F9;0.574769!10549-107H9;0.357734!10615-108G3;0.476415!10487-107B1;0.0370886!10433-106E1;0.601512!10688-109F4;0.23451!10444-106F3;0.664048!10444-106F3;0.992105!10485-107A8;0.921115!10413-106B8;0.608259!10175-103C4;0.916046!10161-103A8;0.616474!12131-128D7;0.527639!10624-108H3;0.0355608!10712-109I1;0.0866037!10205-103F7;0.978907!10206-103F8;0.709176!10207-103F9;0.680783!10050-101G5;0.705942!10051-101G6;0.591474!10016-101C7;0.610722!10046-101G1;0.594809!10778-110G4;0.760861!10633-108I3;0.927277!10818-111B8;0.650338!10819-111B9;0.756794!10820-111C1;0.740995!10484-107A7;0.641792!10808-111A7;0.40389!10169-103B7;0.429807!10153-102I9;0.943821!13425-144D5;0.901465!13433-144E4;0.385156!13437-144E8;0.253325!11904-125F5;0.203263!11905-125F6;0.487339!10039-101F3;0.623786!10791-110H8;0.944186!10017-101C8;0.791616!10045-101F9;0.0887823!10509-107D5;0.404219!10839-111E2;0.142662!10692-109F8;0.681079!10079-102A7;0.681337!10078-102A6;0.627828!10721-110A1;0.48986!10569-108B2;0.684062!10570-108B3;0.826372!10571-108B4;0.50766!10647-109A8;0.824031!10752-110D5;0.0752955!10782-110G8;0.383389!10726-110A6;0.664367!10018-101C9;0.911132!10086-102B5;0.248166!10182-103D2;0.270509!10165-103B3;0.640124!10499-107C4;0.822189!10408-106B3;0.288383!10019-101D1;0.348267!10068-101I5;0.558964!10075-102A3;0.600844!10077-102A5;0.328885!10727-110A7;0.656903!10775-110G1;0.265513!10412-106B7;0.657446!12231-129F8;0.0571148!12232-129F9;0.596462!12233-129G1;0.564153!12234-129G2;0.638916!10414-106B9;0.462596!10170-103B8;0.542321!10183-103D3;0.912279!10150-102I6;0.765766!10174-103C3;0.904129!10155-103A2;0.451212!10038-101F2;0.612367!10838-111E1;0.652127!10759-110E3;0.354554!10514-107E1;0.925009!10465-106H6;0.779492!10691-109F7;0.558794!10843-111E6;0.00248386!10844-111E7;0.540157!11747-123G1;0.223122!11748-123G2;0.613435!11749-123G3;0.682742!11750-123G4;0.289417!11751-123G5;0.62179!11840-124H4;0.986646!11752-123G6;0.48!11753-123G7;0.14941!11754-123G8;0.177561!11755-123G9;0.596934!11756-123H1;0.288443!11833-124G6;0.731361!11760-123H5;0.186166!11836-124G9;0.580117!11758-123H3;0.0842054!11835-124G8;0.399161!11762-123H7;0.874898!11838-124H2;0.891293!11757-123H2;0.92587!11759-123H4;0.816172!11761-123H6;0.349725!11842-124H6;0.89924!11837-124H1;0.360747!10568-108B1;0.749872!13230-141I8;0.522373!13231-141I9;0.919508!10696-109G3;0.896358!10493-107B7;0.178253!10494-107B8;0.161367!10850-111F4;0.551392!10851-111F5;0.628072!10852-111F6;0.39247!10853-111F7;0.246181!10854-111F8;0.922297!10855-111F9;0.632415!10856-111G1;0.0621029!10847-111F1;0.0467921!10846-111E9;0.16451!10848-111F2;0.839441!10845-111E8;0.916372!10857-111G2;0.90882!10858-111G3;0.710746!10156-103A3;0.757934!11901-125F2;0.870127!11902-125F3;0.954561!11903-125F4;0.780377!10689-109F5;0.666325!10648-109A9;0.177559!10784-110H1;0.0861887!10744-110C6;0.385598!10772-110F7;0.533804!10474-106I6;0.568161!10600-108E6;0.235056!10684-109E9;0.312095!12226-129F3;0.0689867!12227-129F4;0.778364!10508-107D4;0.52438!10539-107G8;0.822678!10607-108F4;0.453184!10555-107I6;0.864562!10774-110F9;0.807727!10637-108I7;0.86607!10663-109C6;0.881329!10728-110A8;0.797719!10729-110A9;0.83108!10430-106D7;0.700156!10730-110B1;0.689657!10813-111B3;0.174074!10812-111B2;0.879117!10037-101F1;0.972454!10172-103C1;0.855036!10163-103B1;0.890914!10076-102A4;0.806662!10073-102A1;0.676628!10036-101E9;0.882773!10195-103E6;0.836816!10277-104E7;0.734962!10434-106E2;0.399175!10550-107I1;0.36347!10545-107H5;0.701392!10544-107H4;0.224284!10704-109H2;0.983915!10510-107D6;0.149567!10558-107I9;0.167568!10020-101D2;0.392447!10732-110B3;0.434853!10049-101G4;0.37514!10698-109G5;0.968641!10437-106E5;0.988596!10417-106C3;0.26386!10035-101E8;0.93507!10171-103B9;0.864936!10157-103A4;0.635254!10034-101E7;0.919907!10072-101I9;0.781311!10199-103F1;0.809194!10200-103F2;0.0685577!10697-109G4;0.403867!10723-110A3;0.15317!10179-103C8;0.888457!10160-103A7;0.718244!10180-103C9;0.973104!10162-103A9;0.767888!10021-101D3;0.873642!10840-111E3;0.674469!10706-109H4;0.654288!10033-101E6;0.0567445!10032-101E5;0.626573!10490-107B4;0.923037!10439-106E7;0.850001!10022-101D4;0.777007!10176-103C5;0.309142!10469-106I1;0.861749!10067-101I4;0.456552!10411-106B6;0.640788!10471-106I3;0.276854!10030-101E3;0.86472!10475-106I7;0.527586!10787-110H4;0.822066!10477-106I9;0.560881!10695-109G2;0.69763!11771-123I7;0.757292!11772-123I8;0.283201!11773-123I9;0.581062!10093-102C3;0.798289!10442-106F1;0.227121!10442-106F1;0.162486!10201-103F3;0.195887!10639-108I9;0.19359!11843-124H7;0.491306!11841-124H5;0.095655!10693-109F9;0.459915!10436-106E4;0.316025!10483-107A6;0.644975!10282-104F3;0.983099!10023-101D5;0.203305!10066-101I3;0.430468!10065-101I2;0.350535!10800-110I8;0.411123!10610-108F7;0.454223!10841-111E4;0.910095!10541-107H1;0.698308!10842-111E5;0.981828!10562-108A4;0.827197!10024-101D6;0.980959!10064-101I1;0.879882!10609-108F6;0.653494!10048-101G3;0.509697!10781-110G7;0.433928!10181-103D1;0.247564!10159-103A6;0.464526!10056-101H2;0.528124!10737-110B8;0.497899!10025-101D7;0.430125!10044-101F8;0.448273!10424-106D1;0.415904!10463-106H4;0.651275!10616-108G4;0.75299!10486-107A9;0.10819!10062-101H8;0.715403!10202-103F4;0.509954!10158-103A5;0.247448!10441-106E9;0.45288!10031-101E4;0.765105!10063-101H9;0.938042!10063-101H9;0.80032!11763-123H8;0.924535!11765-123I1;0.911381!11768-123I4;0.418335!10807-111A6;0.754296!10790-110H7;0.533866!10798-110I6;0.858511!10786-110H3;0.422202!10591-108D6;0.576801!10593-108D8;0.686104!10590-108D5;0.752014!10026-101D8;0.859781!10096-102C6;0.800219!10168-103B6;0.560147!10154-103A1;0.322089!10209-103G2;0.657625!10061-101H7;0.582645!10027-101D9;0.638593!10043-101F7;0.794973!10783-110G9;0.561729!10028-101E1;0.204285!10060-101H6;0.601832!10203-103F5;0.772376!10059-101H5;0.566439!10047-101G2;0.375923!10029-101E2;0.599585!10058-101H4;0.844551!10418-106C4;0.630535!10492-107B6;0.893228!10694-109G1;0.371089!10797-110I5;0.103702!10057-101H3;0.138415!10100-102D1;0.471178!10055-101H1;0.536181!10204-103F6;0.526493!10191-103E2;0.290538!10563-108A5;0.558469
|name=ZN589_f1
|name=ZN589_f1
|tomtom_result=Spz1#MA0111.1;-2;3.12316e-05;0.0148662;0.0296935;11;CGGCAGTAACCGTGGG;GCTGTTACCCT;-!dl_1#MA0022.1;0;0.00299553;1.42587;0.626347;12;CGGCAGTAACCGTGGG;CGGAAAAACCCC;-!ARO80#MA0273.1;0;0.00300137;1.42865;0.626347;16;CGGCAGTAACCGTGGG;ACATACTTGCCGAGAATTATC;-!ovo#MA0126.1;-4;0.00377966;1.79912;0.626347;9;CGGCAGTAACCGTGGG;AGTAACAGT;+!prd#MA0239.1;-4;0.00377966;1.79912;0.626347;9;CGGCAGTAACCGTGGG;AGTAACAGT;+!Pax4#MA0068.1;3;0.00395274;1.8815;0.626347;16;CGGCAGTAACCGTGGG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!En1#MA0027.1;0;0.0052197;2.48458;0.708176;11;CGGCAGTAACCGTGGG;AAGTAGTGCCC;+!TFAP2A#MA0003.1;-8;0.00595886;2.83642;0.708176;8;CGGCAGTAACCGTGGG;CCCCCGGGC;-!Kr#MA0452.1;-6;0.00829639;3.94908;0.876425;10;CGGCAGTAACCGTGGG;TAACCCTTTTG;-!myb.Ph3#MA0054.1;-6;0.0112539;5.35684;0.88576;9;CGGCAGTAACCGTGGG;TAACCGTTT;+!TBP#MA0108.2;0;0.0121113;5.76499;0.88576;15;CGGCAGTAACCGTGGG;GTATAAAAGGCGGGG;+!TBP#MA0108.2;0;0.0121113;5.76499;0.88576;15;CGGCAGTAACCGTGGG;GTATAAAAGGCGGGG;+!EBF1#MA0154.1;-8;0.0170554;8.11837;0.998691;8;CGGCAGTAACCGTGGG;TCCCTTGGGT;-!Ar#MA0007.1;-1;0.0179905;8.56346;0.998691;15;CGGCAGTAACCGTGGG;GGCGGGTACACGATGTTCTTAT;-!REB1#MA0363.1;-5;0.0202604;9.64394;0.998691;9;CGGCAGTAACCGTGGG;GTTACCCGG;+!YGR067C#MA0425.1;-4;0.0203239;9.67419;0.998691;12;CGGCAGTAACCGTGGG;TGAAAAAGTGGGGT;-
}}
}}

Latest revision as of 13:56, 7 September 2012

Full Name: ZN589_f1

Motif matrix
POACGT
12.54280821917807486.2414383561643864.597602739726021.618150684931505
20.92465753424657452.87671232876711979.3493150684931551.849315068493155
33.80136986301370471.8493150684931559.3493150684931550.0
40.07.52.7739726027397254.7260273972602755
56.6780821917808260.02.7739726027397255.54794520547945
65.7534246575342390.07.3972602739726051.849315068493155
75.6506849315068451.952054794520550.07.397260273972605
88.5273972602739650.00.06.472602739726035
97.3972602739726054.72602739726027552.87671232876711970.0
101.9520547945205512.123287671232880.92465753424657450.0
112.77397260273972510.376712328767121.8493150684931550.0
120.05.6506849315068456.57534246575343052.773972602739725
131.8493150684931552.7739726027397250.92465753424657459.452054794520551
140.01.8493150684931557.55.650684931506845
150.01.952054794520559.2465753424657453.8013698630137047
162.5684931506849352.5684931506849357.29452054794520952.568493150684935

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Spz1#MA0111.1-23.12316e-050.01486620.029693511CGGCAGTAACCGTGGGGCTGTTACCCT-
dl_1#MA0022.100.002995531.425870.62634712CGGCAGTAACCGTGGGCGGAAAAACCCC-
ARO80#MA0273.100.003001371.428650.62634716CGGCAGTAACCGTGGGACATACTTGCCGAGAATTATC-
ovo#MA0126.1-40.003779661.799120.6263479CGGCAGTAACCGTGGGAGTAACAGT+
prd#MA0239.1-40.003779661.799120.6263479CGGCAGTAACCGTGGGAGTAACAGT+
Pax4#MA0068.130.003952741.88150.62634716CGGCAGTAACCGTGGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
En1#MA0027.100.00521972.484580.70817611CGGCAGTAACCGTGGGAAGTAGTGCCC+
TFAP2A#MA0003.1-80.005958862.836420.7081768CGGCAGTAACCGTGGGCCCCCGGGC-
Kr#MA0452.1-60.008296393.949080.87642510CGGCAGTAACCGTGGGTAACCCTTTTG-
myb.Ph3#MA0054.1-60.01125395.356840.885769CGGCAGTAACCGTGGGTAACCGTTT+
TBP#MA0108.200.01211135.764990.8857615CGGCAGTAACCGTGGGGTATAAAAGGCGGGG+
TBP#MA0108.200.01211135.764990.8857615CGGCAGTAACCGTGGGGTATAAAAGGCGGGG+
EBF1#MA0154.1-80.01705548.118370.9986918CGGCAGTAACCGTGGGTCCCTTGGGT-
Ar#MA0007.1-10.01799058.563460.99869115CGGCAGTAACCGTGGGGGCGGGTACACGATGTTCTTAT-
REB1#MA0363.1-50.02026049.643940.9986919CGGCAGTAACCGTGGGGTTACCCGG+
YGR067C#MA0425.1-40.02032399.674190.99869112CGGCAGTAACCGTGGGTGAAAAAGTGGGGT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:ZN589_f1&oldid=2134180"