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MacroAPE 1083:Motif GGACTN: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;27040;0!02;0;0;27040;0!03;27040;0;0;0!04;0;27040;0;0!05;0;0;0;27040!06;6760;6760;6760;6760 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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9!10788-110H5;0.673208!10792-110H9;0.441451!10765-110E9;0.356822!10829-111D1;0.544953!10830-111D2;0.266663!10831-111D3;0.627187!10832-111D4;0.531968!10833-111D5;0.423777!10764-110E8;0.418736!10770-110F5;0.781348!10399-106A3;0.424717!10400-106A4;0.443496!10405-106A9;0.549501!10834-111D6;0.4763!10835-111D7;0.501914!10836-111D8;0.488363!10837-111D9;0.38471!10699-109G6;0.340636!10802-111A1;0.637471!10796-110I4;0.722874!10010-101C1;0.726186!10810-111A9;0.23118!10421-106C7;0.387113!10708-109H6;0.680371!12235-129G3;0.715919!12236-129G4;0.319114!12237-129G5;0.310726!10167-103B5;0.523259!10151-102I7;0.86812!10428-106D5;0.977252!10795-110I3;0.78219!10805-111A4;0.334879!10052-101G7;0.489459!10189-103D9;0.463146!10589-108D4;0.323576!10425-106D2;0.316458!10427-106D4;0.377832!10702-109G9;0.884686!10432-106D9;0.617576!10496-107C1;0.718507!10718-109I7;0.981468!10011-101C2;0.685189!10053-101G8;0.727615!10686-109F2;0.57442!10084-102B3;0.929556!10012-101C3;0.96045!10085-102B4;0.99992!10482-107A5;0.988939!10419-106C5;0.966854!10080-102A8;0.656118!10760-110E4;0.173511!10709-109H7;0.429585!10710-109H8;0.977546!10703-109H1;0.63506!10719-109I8;0.780099!10642-109A3;0.348725!10177-103C6;0.914997!10164-103B2;0.839987!10173-103C2;0.927058!10166-103B4;0.999922!10083-102B2;0.902255!10188-103D8;0.975046!10552-107I3;0.951432!10553-107I4;0.932091!10013-101C4;0.694888!10536-107G5;0.526239!10618-108G6;0.380081!10423-106C9;0.979403!10785-110H2;0.816728!12238-129G6;0.925175!12239-129G7;0.0607314!12240-129G8;0.243059!10416-106C2;0.0267973!10801-110I9;0.137194!10766-110F1;0.61097!10824-111C5;0.768855!10825-111C6;0.530963!10826-111C7;0.527055!10454-106G4;0.540616!10409-106B4;0.447627!10638-108I8;0.91475!10636-108I6;0.770942!10513-107D9;0.764192!10420-106C6;0.619167!10082-102B1;0.83353!10014-101C5;0.207047!10070-101I7;0.0628375!10452-106G2;0.146709!10453-106G3;0.998966!10449-106F8;0.590431!10042-101F6;0.664215!10069-101I6;0.877305!10193-103E4;0.464283!10631-108I1;0.942515!10438-106E6;0.309528!10488-107B2;0.414681!10196-103E7;0.537738!10071-101I8;0.10518!10071-101I8;0.200698!10041-101F5;0.966086!10451-106G1;0.616557!10450-106F9;0.647066!10604-108F1;0.889533!10605-108F2;0.605319!10606-108F3;0.911993!10603-108E9;0.782179!10497-107C2;0.764274!10448-106F7;0.799797!10643-109A4;0.563994!10426-106D3;0.779797!10431-106D8;0.715117!10197-103E8;0.874993!10443-106F2;0.407465!10815-111B5;0.944931!10816-111B6;0.997725!10817-111B7;0.939356!10015-101C6;0.953046!10410-106B5;0.437811!10054-101G9;0.460814!10758-110E2;0.802518!10711-109H9;0.928094!10040-101F4;0.750925!10470-106I2;0.93897!10415-106C1;0.864758!10198-103E9;0.716901!10614-108G2;0.238881!10612-108F9;0.974402!10549-107H9;0.642296!10615-108G3;0.963688!10487-107B1;0.835458!10433-106E1;0.824971!10688-109F4;0.902999!10444-106F3;0.942885!10444-106F3;0.969657!10485-107A8;0.94709!10413-106B8;0.180883!10175-103C4;0.393604!10161-103A8;0.812575!12131-128D7;0.91146!10624-108H3;0.90888!10712-109I1;0.7415!10205-103F7;0.90184!10206-103F8;0.477184!10207-103F9;0.561784!10050-101G5;0.333823!10051-101G6;0.768265!10016-101C7;0.5307!10046-101G1;0.503092!10778-110G4;0.374922!10633-108I3;0.359835!10818-111B8;0.31357!10819-111B9;0.463694!10820-111C1;0.455599!10484-107A7;0.417852!10808-111A7;0.377753!10169-103B7;0.410421!10153-102I9;0.803351!13425-144D5;0.988548!13433-144E4;0.648205!13437-144E8;0.752186!11904-125F5;0.560048!11905-125F6;0.851842!10039-101F3;0.306894!10791-110H8;0.937721!10017-101C8;0.618236!10045-101F9;0.0398948!10509-107D5;0.051442!10839-111E2;0.846784!10692-109F8;0.282548!10079-102A7;0.841726!10078-102A6;0.599617!10721-110A1;0.58792!10569-108B2;0.331318!10570-108B3;0.229824!10571-108B4;0.587771!10647-109A8;0.231032!10752-110D5;0.602773!10782-110G8;0.43693!10726-110A6;0.490399!10018-101C9;0.955351!10086-102B5;0.486064!10182-103D2;0.146966!10165-103B3;0.995407!10499-107C4;0.980187!10408-106B3;0.950112!10019-101D1;0.688759!10068-101I5;0.148517!10075-102A3;0.1888!10077-102A5;0.286483!10727-110A7;0.503888!10775-110G1;0.556995!10412-106B7;0.85735!12231-129F8;0.746165!12232-129F9;0.0641145!12233-129G1;0.150002!12234-129G2;0.158803!10414-106B9;0.122424!10170-103B8;0.892081!10183-103D3;0.940471!10150-102I6;0.876172!10174-103C3;0.966588!10155-103A2;0.985608!10038-101F2;0.908179!10838-111E1;0.951277!10759-110E3;0.299403!10514-107E1;0.938701!10465-106H6;0.605487!10691-109F7;0.925514!10843-111E6;0.840969!10844-111E7;0.557126!11747-123G1;0.668665!11748-123G2;0.155764!11749-123G3;0.217565!11750-123G4;0.106441!11751-123G5;0.346742!11840-124H4;0.33538!11752-123G6;0.00990936!11753-123G7;0.53894!11754-123G8;0.571111!11755-123G9;0.718727!11756-123H1;0.903107!11833-124G6;0.661783!11760-123H5;0.756425!11836-124G9;0.54557!11758-123H3;0.115732!11835-124G8;0.793427!11762-123H7;0.758688!11838-124H2;0.843237!11757-123H2;0.794996!11759-123H4;0.652696!11761-123H6;0.908033!11842-124H6;0.740761!11837-124H1;0.689039!10568-108B1;0.498037!13230-141I8;0.112722!13231-141I9;0.292877!10696-109G3;0.273279!10493-107B7;0.33701!10494-107B8;0.433498!10850-111F4;0.163729!10851-111F5;0.209366!10852-111F6;0.649543!10853-111F7;0.613091!10854-111F8;0.709002!10855-111F9;0.505091!10856-111G1;0.678856!10847-111F1;0.938229!10846-111E9;0.598306!10848-111F2;0.590795!10845-111E8;0.432221!10857-111G2;0.990766!10858-111G3;0.810069!10156-103A3;0.391882!11901-125F2;0.963115!11902-125F3;0.589728!11903-125F4;0.741514!10689-109F5;0.96951!10648-109A9;0.865113!10784-110H1;0.692722!10744-110C6;0.505396!10772-110F7;0.570807!10474-106I6;0.647262!10600-108E6;0.841661!10684-109E9;0.452413!12226-129F3;0.324434!12227-129F4;0.772096!10508-107D4;0.384875!10539-107G8;0.81744!10607-108F4;0.606975!10555-107I6;0.505333!10774-110F9;0.715113!10637-108I7;0.715631!10663-109C6;0.852667!10728-110A8;0.779064!10729-110A9;0.901021!10430-106D7;0.947024!10730-110B1;0.508705!10813-111B3;0.441359!10812-111B2;0.503802!10037-101F1;0.805406!10172-103C1;0.957511!10163-103B1;0.835439!10076-102A4;0.901138!10073-102A1;0.94362!10036-101E9;0.916753!10195-103E6;0.959377!10277-104E7;0.98399!10434-106E2;0.718262!10550-107I1;0.909929!10545-107H5;0.561704!10544-107H4;0.703186!10704-109H2;0.743175!10510-107D6;0.746911!10558-107I9;0.626118!10020-101D2;0.562733!10732-110B3;0.69823!10049-101G4;0.969898!10698-109G5;0.698293!10437-106E5;0.797766!10417-106C3;0.523756!10035-101E8;0.305957!10171-103B9;0.97372!10157-103A4;0.917278!10034-101E7;0.990363!10072-101I9;0.995251!10199-103F1;0.907626!10200-103F2;0.480335!10697-109G4;0.502489!10723-110A3;0.339812!10179-103C8;0.817476!10160-103A7;0.866159!10180-103C9;0.842676!10162-103A9;0.602662!10021-101D3;0.785376!10840-111E3;0.0902562!10706-109H4;0.806478!10033-101E6;0.850474!10032-101E5;0.963039!10490-107B4;0.970618!10439-106E7;0.39643!10022-101D4;0.923297!10176-103C5;0.461347!10469-106I1;0.843706!10067-101I4;0.481931!10411-106B6;0.362961!10471-106I3;0.65611!10030-101E3;0.853126!10475-106I7;0.696424!10787-110H4;0.217115!10477-106I9;0.187807!10695-109G2;0.894818!11771-123I7;0.997394!11772-123I8;0.895358!11773-123I9;0.808065!10093-102C3;0.0676465!10442-106F1;0.269983!10442-106F1;0.209159!10201-103F3;0.173417!10639-108I9;0.204739!11843-124H7;0.863835!11841-124H5;0.817723!10693-109F9;0.772648!10436-106E4;0.749111!10483-107A6;0.782302!10282-104F3;0.662168!10023-101D5;0.5304!10066-101I3;0.51619!10065-101I2;0.399804!10800-110I8;0.451721!10610-108F7;0.0131005!10841-111E4;0.305451!10541-107H1;0.0988323!10842-111E5;0.923908!10562-108A4;0.571705!10024-101D6;0.491913!10064-101I1;0.0236418!10609-108F6;0.0635058!10048-101G3;0.0447275!10781-110G7;0.769731!10181-103D1;0.566413!10159-103A6;0.97704!10056-101H2;0.949158!10737-110B8;0.936044!10025-101D7;0.722501!10044-101F8;0.0937141!10424-106D1;0.0646154!10463-106H4;0.851549!10616-108G4;0.893659!10486-107A9;0.831561!10062-101H8;0.859649!10202-103F4;0.0982255!10158-103A5;0.307056!10441-106E9;0.768821!10031-101E4;0.492737!10063-101H9;0.985394!10063-101H9;0.974162!11763-123H8;0.294601!11765-123I1;0.727843!11768-123I4;0.617111!10807-111A6;0.218945!10790-110H7;0.443825!10798-110I6;0.67132!10786-110H3;0.235613!10591-108D6;0.486061!10593-108D8;0.225422!10590-108D5;0.858481!10026-101D8;0.318832!10096-102C6;0.853082!10168-103B6;0.298768!10154-103A1;0.923509!10209-103G2;0.950465!10061-101H7;0.492836!10027-101D9;0.421481!10043-101F7;0.93997!10783-110G9;0.637836!10028-101E1;0.988765!10060-101H6;0.384419!10203-103F5;0.293157!10059-101H5;0.591473!10047-101G2;0.393067!10029-101E2;0.302465!10058-101H4;0.267745!10418-106C4;0.523278!10492-107B6;0.870455!10694-109G1;0.4951!10797-110I5;0.98298!10057-101H3;0.558039!10100-102D1;0.64589!10055-101H1;0.665423!10204-103F6;0.379367!10191-103E2;0.733268!10563-108A5;0.44627
|name=motif_GGACTN
|name=motif_GGACTN
|tomtom_result=NF-kappaB#MA0061.1;1;0.017497;8.32858;1;6;GGACTA;GGGAATTTCC;+!YLR278C#MA0430.1;2;0.0179341;8.53662;1;6;GGACTA;CCGGAGTT;+
}}
}}

Latest revision as of 14:04, 7 September 2012

Full Name: motif_GGACTN

Motif matrix
POACGT
0100270400
0200270400
0327040000
0402704000
0500027040
066760676067606760

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NF-kappaB#MA0061.110.0174978.3285816GGACTAGGGAATTTCC+
YLR278C#MA0430.120.01793418.5366216GGACTACCGGAGTT+
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