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MacroAPE 1083:CNhs12622 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;46.52264872069568;9.47441469325495;4.762240782560527;99.2406958034888!2;101.247729676479;10.327223778387697;7.989535435313431;40.43551110981...")
 
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009!10827-111C8;0.317191!10789-110H6;0.99975!10828-111C9;0.882605!10788-110H5;0.510626!10792-110H9;0.186777!10765-110E9;0.280723!10829-111D1;0.177977!10830-111D2;0.058382!10831-111D3;0.108651!10832-111D4;0.54469!10833-111D5;0.460033!10764-110E8;0.0977576!10770-110F5;0.336415!10399-106A3;0.718432!10400-106A4;0.0189108!10405-106A9;0.046557!10834-111D6;0.0232817!10835-111D7;0.326054!10836-111D8;0.252449!10837-111D9;0.2138!10699-109G6;0.0834635!10802-111A1;0.403967!10796-110I4;0.118931!10010-101C1;0.141334!10810-111A9;0.851868!10421-106C7;0.32719!10708-109H6;0.857817!12235-129G3;0.33163!12236-129G4;0.568788!12237-129G5;0.288987!10167-103B5;0.939964!10151-102I7;0.414786!10428-106D5;0.459791!10795-110I3;0.623625!10805-111A4;0.192699!10052-101G7;0.00379626!10189-103D9;0.855683!10589-108D4;0.813616!10425-106D2;0.167046!10427-106D4;0.507893!10702-109G9;0.245334!10432-106D9;0.23977!10496-107C1;0.900403!10718-109I7;0.133679!10011-101C2;0.116779!10053-101G8;0.772604!10686-109F2;0.685435!10084-102B3;0.906454!10012-101C3;0.202956!10085-102B4;0.405667!10482-107A5;0.570418!10419-106C5;0.0192109!10080-102A8;0.239538!10760-110E4;0.430278!10709-109H7;0.0986095!10710-109H8;0.0318429!10703-109H1;0.110951!10719-109I8;0.693619!10642-109A3;0.166422!10177-103C6;0.407749!10164-103B2;0.122415!10173-103C2;0.107912!10166-103B4;0.221382!10083-102B2;0.16157!10188-103D8;0.0713469!10552-107I3;0.719296!10553-107I4;0.603165!10013-101C4;0.45866!10536-107G5;0.645744!10618-108G6;0.534101!10423-106C9;0.180876!10785-110H2;0.544433!12238-129G6;0.996257!12239-129G7;0.107661!12240-129G8;0.43689!10416-106C2;0.0841014!10801-110I9;0.465081!10766-110F1;0.139797!10824-111C5;0.0737754!10825-111C6;0.0225157!10826-111C7;0.00844549!10454-106G4;0.0198671!10409-106B4;0.00248555!10638-108I8;0.511441!10636-108I6;0.442045!10513-107D9;0.48885!10420-106C6;0.342399!10082-102B1;0.438599!10014-101C5;0.692272!10070-101I7;0.630176!10452-106G2;0.55739!10453-106G3;0.0749757!10449-106F8;0.0685976!10042-101F6;0.106759!10069-101I6;0.543066!10193-103E4;0.976298!10631-108I1;0.289066!10438-106E6;0.388125!10488-107B2;0.0115279!10196-103E7;0.240707!10071-101I8;0.578614!10071-101I8;0.809476!10041-101F5;0.668175!10451-106G1;0.989731!10450-106F9;0.108326!10604-108F1;0.0231579!10605-108F2;0.153251!10606-108F3;0.966534!10603-108E9;0.522443!10497-107C2;0.629522!10448-106F7;0.477842!10643-109A4;0.337362!10426-106D3;0.382959!10431-106D8;0.574203!10197-103E8;0.881513!10443-106F2;0.727962!10815-111B5;0.999675!10816-111B6;0.789783!10817-111B7;0.591036!10015-101C6;0.750566!10410-106B5;0.812485!10054-101G9;0.728391!10758-110E2;0.85052!10711-109H9;0.898376!10040-101F4;0.91223!10470-106I2;0.584523!10415-106C1;0.510265!10198-103E9;0.371543!10614-108G2;0.551459!10612-108F9;0.281233!10549-107H9;0.0469537!10615-108G3;0.097132!10487-107B1;0.18906!10433-106E1;0.494727!10688-109F4;0.00994458!10444-106F3;0.588267!10444-106F3;0.996265!10485-107A8;0.933459!10413-106B8;0.567478!10175-103C4;0.523801!10161-103A8;0.116922!12131-128D7;0.608008!10624-108H3;0.672509!10712-109I1;0.690793!10205-103F7;0.21207!10206-103F8;0.641444!10207-103F9;0.941773!10050-101G5;0.89654!10051-101G6;0.961206!10016-101C7;0.684439!10046-101G1;0.887622!10778-110G4;0.962886!10633-108I3;0.6992!10818-111B8;0.00884183!10819-111B9;0.146654!10820-111C1;0.135784!10484-107A7;0.126702!10808-111A7;0.104106!10169-103B7;0.359793!10153-102I9;0.375202!13425-144D5;0.504777!13433-144E4;0.426033!13437-144E8;0.473277!11904-125F5;0.297383!11905-125F6;0.621789!10039-101F3;0.28349!10791-110H8;0.487724!10017-101C8;0.375521!10045-101F9;0.543322!10509-107D5;0.915158!10839-111E2;0.453648!10692-109F8;0.265027!10079-102A7;0.657085!10078-102A6;0.841591!10721-110A1;0.543617!10569-108B2;0.292009!10570-108B3;0.167701!10571-108B4;0.148281!10647-109A8;0.0858758!10752-110D5;0.09518!10782-110G8;0.131048!10726-110A6;0.448851!10018-101C9;0.103967!10086-102B5;0.13432!10182-103D2;0.0323701!10165-103B3;0.268434!10499-107C4;0.555355!10408-106B3;0.790841!10019-101D1;0.184857!10068-101I5;0.406505!10075-102A3;0.122304!10077-102A5;0.374563!10727-110A7;0.953035!10775-110G1;0.443139!10412-106B7;0.85568!12231-129F8;0.67479!12232-129F9;0.573972!12233-129G1;0.526469!12234-129G2;0.86287!10414-106B9;0.66993!10170-103B8;0.00758175!10183-103D3;0.346419!10150-102I6;0.395682!10174-103C3;0.44362!10155-103A2;0.335909!10038-101F2;0.635587!10838-111E1;0.910088!10759-110E3;0.0860273!10514-107E1;0.769632!10465-106H6;0.933777!10691-109F7;0.404739!10843-111E6;0.842108!10844-111E7;0.342538!11747-123G1;0.0732851!11748-123G2;0.171268!11749-123G3;0.13037!11750-123G4;0.194927!11751-123G5;0.11507!11840-124H4;0.108289!11752-123G6;0.396127!11753-123G7;0.110239!11754-123G8;0.0874804!11755-123G9;0.485538!11756-123H1;0.0299086!11833-124G6;0.0475312!11760-123H5;0.0868436!11836-124G9;0.166943!11758-123H3;0.174863!11835-124G8;0.454996!11762-123H7;0.25624!11838-124H2;0.282914!11757-123H2;0.145685!11759-123H4;0.699791!11761-123H6;0.750821!11842-124H6;0.0534392!11837-124H1;0.466737!10568-108B1;0.316197!13230-141I8;0.239856!13231-141I9;0.525683!10696-109G3;0.274729!10493-107B7;0.69061!10494-107B8;0.782734!10850-111F4;0.827844!10851-111F5;0.609497!10852-111F6;0.794364!10853-111F7;0.401379!10854-111F8;0.522439!10855-111F9;0.148616!10856-111G1;0.425338!10847-111F1;0.524545!10846-111E9;0.429207!10848-111F2;0.855538!10845-111E8;0.983531!10857-111G2;0.365634!10858-111G3;0.771148!10156-103A3;0.850637!11901-125F2;0.46735!11902-125F3;0.291447!11903-125F4;0.709457!10689-109F5;0.842994!10648-109A9;0.150383!10784-110H1;0.091488!10744-110C6;0.339999!10772-110F7;0.13134!10474-106I6;0.0881322!10600-108E6;0.656521!10684-109E9;0.7549!12226-129F3;0.00625199!12227-129F4;0.556902!10508-107D4;0.581901!10539-107G8;0.502996!10607-108F4;0.259512!10555-107I6;0.129392!10774-110F9;0.978801!10637-108I7;0.466513!10663-109C6;0.57206!10728-110A8;0.0956906!10729-110A9;0.259813!10430-106D7;0.639939!10730-110B1;0.113279!10813-111B3;0.402051!10812-111B2;0.396377!10037-101F1;0.668862!10172-103C1;0.407282!10163-103B1;0.148125!10076-102A4;0.352752!10073-102A1;0.435542!10036-101E9;0.784802!10195-103E6;0.360053!10277-104E7;0.642699!10434-106E2;0.372778!10550-107I1;0.263561!10545-107H5;0.0400651!10544-107H4;0.774854!10704-109H2;0.222774!10510-107D6;0.277125!10558-107I9;0.568513!10020-101D2;0.648616!10732-110B3;0.968677!10049-101G4;0.234709!10698-109G5;0.0683793!10437-106E5;0.0586657!10417-106C3;0.674322!10035-101E8;0.38562!10171-103B9;0.438266!10157-103A4;0.46739!10034-101E7;0.469326!10072-101I9;0.553412!10199-103F1;0.685408!10200-103F2;0.314435!10697-109G4;0.77053!10723-110A3;0.00774527!10179-103C8;0.0585593!10160-103A7;0.733361!10180-103C9;0.268242!10162-103A9;0.608592!10021-101D3;0.223729!10840-111E3;0.945182!10706-109H4;0.481275!10033-101E6;0.721718!10032-101E5;0.859828!10490-107B4;0.450224!10439-106E7;0.194946!10022-101D4;0.100702!10176-103C5;0.664415!10469-106I1;0.263779!10067-101I4;0.052173!10411-106B6;0.574672!10471-106I3;0.184055!10030-101E3;0.109666!10475-106I7;0.622023!10787-110H4;0.185973!10477-106I9;0.0863337!10695-109G2;0.494427!11771-123I7;0.0702351!11772-123I8;0.381169!11773-123I9;0.987686!10093-102C3;0.448158!10442-106F1;0.035765!10442-106F1;0.00187779!10201-103F3;0.00104272!10639-108I9;0.475808!11843-124H7;0.38346!11841-124H5;0.480641!10693-109F9;0.725234!10436-106E4;0.130654!10483-107A6;0.0249769!10282-104F3;0.0161807!10023-101D5;0.383609!10066-101I3;0.882559!10065-101I2;0.685205!10800-110I8;0.881661!10610-108F7;1.18078e-06!10841-111E4;0.50572!10541-107H1;0.201616!10842-111E5;0.0262662!10562-108A4;0.99012!10024-101D6;0.130988!10064-101I1;0.506591!10609-108F6;0.517716!10048-101G3;0.0921468!10781-110G7;0.857294!10181-103D1;0.015081!10159-103A6;0.54929!10056-101H2;0.857464!10737-110B8;0.731052!10025-101D7;0.101044!10044-101F8;0.687892!10424-106D1;0.575285!10463-106H4;0.782401!10616-108G4;0.0248224!10486-107A9;0.758928!10062-101H8;0.453771!10202-103F4;0.0525261!10158-103A5;0.340999!10441-106E9;0.79761!10031-101E4;0.506144!10063-101H9;0.528101!10063-101H9;0.491204!11763-123H8;0.773858!11765-123I1;0.0632931!11768-123I4;0.0269105!10807-111A6;0.046588!10790-110H7;0.752671!10798-110I6;0.520786!10786-110H3;0.578748!10591-108D6;0.70251!10593-108D8;0.77504!10590-108D5;0.979697!10026-101D8;0.434541!10096-102C6;0.0530378!10168-103B6;0.0282096!10154-103A1;0.197857!10209-103G2;0.48422!10061-101H7;0.578618!10027-101D9;0.985013!10043-101F7;0.683417!10783-110G9;0.385957!10028-101E1;0.290972!10060-101H6;0.614394!10203-103F5;0.989575!10059-101H5;0.597475!10047-101G2;0.779474!10029-101E2;0.861215!10058-101H4;0.600939!10418-106C4;0.77032!10492-107B6;0.467014!10694-109G1;0.730412!10797-110I5;0.807034!10057-101H3;0.0393265!10100-102D1;0.387051!10055-101H1;0.514113!10204-103F6;0.838039!10191-103E2;0.817454!10563-108A5;0.937469
|name=CNhs12622_bl_f1
|name=CNhs12622_bl_f1
|tomtom_result=GAT4#MA0302.1;0;0.00235419;1.12059;1;11;TAATCTCTATAT;AAAGATCTAAA;+!NHP6A#MA0345.1;1;0.00235912;1.12294;1;12;TAATCTCTATAT;ATGACCTATATATAAAAATGA;+!ECM23#MA0293.1;0;0.00522621;2.48768;1;11;TAATCTCTATAT;AAAGATCTAAA;+!RLM1#MA0369.1;0;0.00623592;2.9683;1;12;TAATCTCTATAT;GAATCTATTTATAGAACT;-!ABF1#MA0265.1;0;0.00625519;2.97747;1;12;TAATCTCTATAT;ATATCACTTTATACGA;-!NHP6B#MA0346.1;5;0.00731665;3.48272;1;12;TAATCTCTATAT;TCATATTATATATAAATAAA;-!Cf2_II#MA0015.1;-2;0.00738563;3.51556;1;10;TAATCTCTATAT;GTATATATAC;+!ARR10#MA0121.1;0;0.012503;5.95141;1;8;TAATCTCTATAT;GCGGATCT;-!GAT3#MA0301.1;-2;0.0125407;5.96939;1;9;TAATCTCTATAT;AGATCTACA;+!ARR1#MA0274.1;-4;0.0209468;9.97066;1;8;TAATCTCTATAT;ACTTGAAT;+
}}
}}

Latest revision as of 14:08, 7 September 2012

Full Name: CNhs12622_bl_f1

Motif matrix
POACGT
146.522648720695689.474414693254954.76224078256052799.2406958034888
2101.24772967647910.3272237783876977.98953543531343140.435511109819906
369.060633151440095.34548853694322444.6596930066996340.93418530491702
49.6866528411550952.295752169748273540.62417197289599107.39342301620064
567.9816965363698484.016777773878375.482164097169882.5193615925818857
63.9906436921480741.34191696069075823.76530423216539150.9021351149959
711.35721704814682139.807330805193261.2996343505315227.5358177961284545
80.49762854634974650.5319528262774170.2358656958583567158.7345529315146
976.156631072881959.0285616845987969.111637969291555.703169273227706
1063.56072944182247417.4467316086462575.38187288772136373.61066606180992
11112.4996221636589632.236007860815538.2715321726754486.992837802850087
1245.730789199551269.5930916645055186.72979557529277997.94632356065044

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
GAT4#MA0302.100.002354191.12059111TAATCTCTATATAAAGATCTAAA+
NHP6A#MA0345.110.002359121.12294112TAATCTCTATATATGACCTATATATAAAAATGA+
ECM23#MA0293.100.005226212.48768111TAATCTCTATATAAAGATCTAAA+
RLM1#MA0369.100.006235922.9683112TAATCTCTATATGAATCTATTTATAGAACT-
ABF1#MA0265.100.006255192.97747112TAATCTCTATATATATCACTTTATACGA-
NHP6B#MA0346.150.007316653.48272112TAATCTCTATATTCATATTATATATAAATAAA-
Cf2_II#MA0015.1-20.007385633.51556110TAATCTCTATATGTATATATAC+
ARR10#MA0121.100.0125035.9514118TAATCTCTATATGCGGATCT-
GAT3#MA0301.1-20.01254075.9693919TAATCTCTATATAGATCTACA+
ARR1#MA0274.1-40.02094689.9706618TAATCTCTATATACTTGAAT+
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