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MacroAPE 1083:CNhs12566 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;618.3580478722669;306.5717588583499;572.8637245329619;825.4660333389982!2;584.9869588823123;352.3213681405027;661.4884420904389;724.46279548...")
 
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4-106H5;0.652858!10827-111C8;0.302457!10789-110H6;0.857425!10828-111C9;0.904214!10788-110H5;0.829879!10792-110H9;0.882448!10765-110E9;0.938122!10829-111D1;0.924543!10830-111D2;0.753004!10831-111D3;0.628135!10832-111D4;0.78271!10833-111D5;0.895239!10764-110E8;0.955766!10770-110F5;0.619265!10399-106A3;0.847414!10400-106A4;0.923217!10405-106A9;0.994318!10834-111D6;0.850156!10835-111D7;0.628289!10836-111D8;0.253871!10837-111D9;0.39905!10699-109G6;0.954129!10802-111A1;0.35343!10796-110I4;0.75947!10010-101C1;0.151831!10810-111A9;0.0780294!10421-106C7;0.166959!10708-109H6;0.927558!12235-129G3;0.0924283!12236-129G4;0.876179!12237-129G5;0.753302!10167-103B5;0.726084!10151-102I7;0.0530967!10428-106D5;0.0305578!10795-110I3;0.00592014!10805-111A4;0.756681!10052-101G7;0.242006!10189-103D9;0.528307!10589-108D4;0.025832!10425-106D2;0.711946!10427-106D4;0.00347195!10702-109G9;0.52245!10432-106D9;0.689113!10496-107C1;0.694513!10718-109I7;0.795032!10011-101C2;0.675334!10053-101G8;0.0975871!10686-109F2;0.253531!10084-102B3;0.0365946!10012-101C3;0.0192099!10085-102B4;0.00619462!10482-107A5;0.154551!10419-106C5;0.0118053!10080-102A8;0.0328836!10760-110E4;0.680542!10709-109H7;0.0108011!10710-109H8;0.29613!10703-109H1;0.251556!10719-109I8;0.80848!10642-109A3;0.774201!10177-103C6;0.201775!10164-103B2;0.0210589!10173-103C2;0.0238898!10166-103B4;0.103644!10083-102B2;0.0860362!10188-103D8;0.0664634!10552-107I3;0.00794245!10553-107I4;0.11965!10013-101C4;0.147293!10536-107G5;0.160096!10618-108G6;0.010428!10423-106C9;0.11035!10785-110H2;0.142546!12238-129G6;5.82865e-05!12239-129G7;0.197375!12240-129G8;0.641876!10416-106C2;0.292211!10801-110I9;0.81915!10766-110F1;0.379924!10824-111C5;0.759295!10825-111C6;0.399144!10826-111C7;0.394572!10454-106G4;0.313904!10409-106B4;0.624217!10638-108I8;0.913158!10636-108I6;0.00602422!10513-107D9;0.0769314!10420-106C6;0.0819465!10082-102B1;0.232519!10014-101C5;0.142483!10070-101I7;0.0416272!10452-106G2;0.0709382!10453-106G3;0.435768!10449-106F8;0.673703!10042-101F6;0.604805!10069-101I6;0.0220525!10193-103E4;0.307212!10631-108I1;0.00362593!10438-106E6;0.181477!10488-107B2;0.165117!10196-103E7;0.197668!10071-101I8;0.755871!10071-101I8;0.0094599!10041-101F5;0.070366!10451-106G1;0.000575771!10450-106F9;0.0855997!10604-108F1;0.169089!10605-108F2;0.0353051!10606-108F3;0.196954!10603-108E9;0.087069!10497-107C2;0.0179872!10448-106F7;0.0163034!10643-109A4;0.151407!10426-106D3;0.0253205!10431-106D8;0.224956!10197-103E8;0.0791267!10443-106F2;0.0953703!10815-111B5;0.218607!10816-111B6;0.229053!10817-111B7;0.142682!10015-101C6;0.208122!10410-106B5;0.0131923!10054-101G9;0.912207!10758-110E2;0.0124265!10711-109H9;0.104209!10040-101F4;0.00753184!10470-106I2;0.0106387!10415-106C1;0.134297!10198-103E9;0.259067!10614-108G2;0.00389565!10612-108F9;0.100125!10549-107H9;0.0857625!10615-108G3;0.133904!10487-107B1;0.208803!10433-106E1;0.248196!10688-109F4;0.133968!10444-106F3;0.835362!10444-106F3;0.113769!10485-107A8;0.199332!10413-106B8;0.0181458!10175-103C4;0.0399234!10161-103A8;0.0326344!12131-128D7;0.0393989!10624-108H3;0.658432!10712-109I1;0.000389823!10205-103F7;0.362307!10206-103F8;0.285579!10207-103F9;0.516836!10050-101G5;0.368974!10051-101G6;0.874056!10016-101C7;0.419981!10046-101G1;0.409231!10778-110G4;0.457111!10633-108I3;0.386476!10818-111B8;0.0115764!10819-111B9;0.201683!10820-111C1;0.203251!10484-107A7;0.206734!10808-111A7;0.0710382!10169-103B7;0.753246!10153-102I9;0.0313669!13425-144D5;0.023136!13433-144E4;0.0640124!13437-144E8;0.0455941!11904-125F5;0.0858834!11905-125F6;0.402612!10039-101F3;0.920933!10791-110H8;0.0150609!10017-101C8;0.0248149!10045-101F9;0.0220893!10509-107D5;0.253312!10839-111E2;0.0669853!10692-109F8;0.305872!10079-102A7;0.18223!10078-102A6;0.373501!10721-110A1;0.478643!10569-108B2;0.0419957!10570-108B3;0.901429!10571-108B4;0.885466!10647-109A8;0.161902!10752-110D5;0.0998316!10782-110G8;0.789248!10726-110A6;0.13888!10018-101C9;0.00256933!10086-102B5;0.0147008!10182-103D2;0.162623!10165-103B3;0.0278969!10499-107C4;0.0111279!10408-106B3;0.0158042!10019-101D1;0.546349!10068-101I5;0.0415079!10075-102A3;0.22364!10077-102A5;0.0130921!10727-110A7;0.00708601!10775-110G1;0.462507!10412-106B7;0.486075!12231-129F8;0.610864!12232-129F9;0.988465!12233-129G1;0.481686!12234-129G2;0.867851!10414-106B9;0.75385!10170-103B8;0.225219!10183-103D3;0.0279262!10150-102I6;0.0348972!10174-103C3;0.019341!10155-103A2;0.0365193!10038-101F2;0.0101683!10838-111E1;0.0133595!10759-110E3;0.443546!10514-107E1;0.00132822!10465-106H6;0.00100229!10691-109F7;0.0002971!10843-111E6;0.199974!10844-111E7;0.943025!11747-123G1;0.516894!11748-123G2;0.392454!11749-123G3;0.0432919!11750-123G4;0.340299!11751-123G5;0.125164!11840-124H4;0.289542!11752-123G6;0.394081!11753-123G7;0.42959!11754-123G8;0.349853!11755-123G9;0.351576!11756-123H1;0.0674027!11833-124G6;0.149384!11760-123H5;0.282369!11836-124G9;0.165074!11758-123H3;0.904515!11835-124G8;0.776085!11762-123H7;0.978045!11838-124H2;0.875118!11757-123H2;0.659123!11759-123H4;0.263233!11761-123H6;0.215381!11842-124H6;0.818394!11837-124H1;0.178746!10568-108B1;0.943405!13230-141I8;0.636086!13231-141I9;0.723451!10696-109G3;0.935491!10493-107B7;0.944424!10494-107B8;0.0944762!10850-111F4;0.41753!10851-111F5;0.196423!10852-111F6;0.480506!10853-111F7;0.507082!10854-111F8;0.346046!10855-111F9;0.114928!10856-111G1;0.412958!10847-111F1;0.343123!10846-111E9;0.163557!10848-111F2;0.294117!10845-111E8;0.0540581!10857-111G2;0.144963!10858-111G3;0.262085!10156-103A3;0.0401828!11901-125F2;0.0288886!11902-125F3;0.638649!11903-125F4;0.821832!10689-109F5;0.991624!10648-109A9;2.6919e-06!10784-110H1;0.0668195!10744-110C6;0.618492!10772-110F7;0.246242!10474-106I6;0.177823!10600-108E6;0.923508!10684-109E9;0.029608!12226-129F3;0.00680335!12227-129F4;0.864221!10508-107D4;0.187769!10539-107G8;0.932314!10607-108F4;0.943964!10555-107I6;0.0352581!10774-110F9;0.670701!10637-108I7;0.039949!10663-109C6;0.0193466!10728-110A8;0.43529!10729-110A9;0.0123872!10430-106D7;0.920164!10730-110B1;0.0108541!10813-111B3;0.913326!10812-111B2;0.351696!10037-101F1;0.210121!10172-103C1;0.0120608!10163-103B1;0.0225115!10076-102A4;0.0369847!10073-102A1;0.0133929!10036-101E9;0.14063!10195-103E6;0.0175044!10277-104E7;0.0232798!10434-106E2;0.602692!10550-107I1;0.428089!10545-107H5;0.0576905!10544-107H4;0.182725!10704-109H2;0.164969!10510-107D6;0.156534!10558-107I9;0.000722603!10020-101D2;0.00528537!10732-110B3;0.295257!10049-101G4;0.0920506!10698-109G5;0.935347!10437-106E5;0.211228!10417-106C3;0.067828!10035-101E8;0.366593!10171-103B9;0.0123377!10157-103A4;0.0756782!10034-101E7;0.0271827!10072-101I9;0.017803!10199-103F1;0.166181!10200-103F2;0.228395!10697-109G4;0.0407072!10723-110A3;0.295464!10179-103C8;0.107901!10160-103A7;0.482794!10180-103C9;0.318112!10162-103A9;0.211221!10021-101D3;0.24953!10840-111E3;0.257896!10706-109H4;0.841312!10033-101E6;0.00318573!10032-101E5;0.0108462!10490-107B4;0.0134224!10439-106E7;0.155379!10022-101D4;0.0813152!10176-103C5;0.0500682!10469-106I1;0.0294833!10067-101I4;0.1106!10411-106B6;0.00614739!10471-106I3;0.663447!10030-101E3;0.510491!10475-106I7;0.0542932!10787-110H4;0.0822434!10477-106I9;0.992033!10695-109G2;0.559787!11771-123I7;0.0899451!11772-123I8;0.10901!11773-123I9;0.090418!10093-102C3;0.097344!10442-106F1;0.342015!10442-106F1;0.00824079!10201-103F3;0.0234453!10639-108I9;0.938755!11843-124H7;0.0633543!11841-124H5;0.0143382!10693-109F9;0.0258942!10436-106E4;0.0209298!10483-107A6;0.233296!10282-104F3;0.259266!10023-101D5;0.959061!10066-101I3;0.520951!10065-101I2;0.199778!10800-110I8;0.0654268!10610-108F7;0.0659341!10841-111E4;0.314617!10541-107H1;0.689887!10842-111E5;0.105778!10562-108A4;0.276157!10024-101D6;0.0454037!10064-101I1;0.0218896!10609-108F6;0.00103793!10048-101G3;0.622576!10781-110G7;0.724046!10181-103D1;0.606761!10159-103A6;0.0483927!10056-101H2;0.0279388!10737-110B8;0.0478833!10025-101D7;0.147847!10044-101F8;0.013519!10424-106D1;0.000273656!10463-106H4;0.787812!10616-108G4;0.550734!10486-107A9;0.0823947!10062-101H8;0.0478388!10202-103F4;0.233998!10158-103A5;0.0591854!10441-106E9;0.0619894!10031-101E4;0.544009!10063-101H9;0.0102573!10063-101H9;0.111528!11763-123H8;4.15749e-05!11765-123I1;0.718557!11768-123I4;0.633269!10807-111A6;0.65185!10790-110H7;0.00326697!10798-110I6;0.0685765!10786-110H3;0.0874405!10591-108D6;0.0088145!10593-108D8;0.00896431!10590-108D5;0.0318477!10026-101D8;0.00706734!10096-102C6;0.505384!10168-103B6;0.824372!10154-103A1;0.0182455!10209-103G2;0.0159122!10061-101H7;0.0124953!10027-101D9;0.112503!10043-101F7;0.122258!10783-110G9;0.0113069!10028-101E1;0.227929!10060-101H6;0.940585!10203-103F5;0.905655!10059-101H5;0.0437556!10047-101G2;0.098152!10029-101E2;0.0165799!10058-101H4;0.00785031!10418-106C4;0.0705663!10492-107B6;0.0919185!10694-109G1;0.0115798!10797-110I5;0.00263005!10057-101H3;0.090428!10100-102D1;0.423248!10055-101H1;0.723371!10204-103F6;0.503725!10191-103E2;0.674548!10563-108A5;0.000633941
|name=CNhs12566_bl_f1
|name=CNhs12566_bl_f1
|tomtom_result=Tal1::Gata1#MA0140.1;7;9.77975e-07;0.000465516;0.000930796;11;TTTCAGAGAAG;CTGGTGGGGACAGATAAG;+!Gata1#MA0035.2;-2;3.08355e-05;0.0146777;0.014674;9;TTTCAGAGAAG;ACAGATAAGAA;+!GAT1#MA0300.1;-3;0.00156914;0.74691;0.485601;8;TTTCAGAGAAG;CCGATAAG;+!Trl#MA0205.1;-1;0.00204086;0.971447;0.485601;10;TTTCAGAGAAG;GAGAGAGCAA;-!SFL1#MA0377.1;2;0.00337269;1.6054;0.641998;11;TTTCAGAGAAG;TAGAGAATAGAAGAAATAAAA;+!Evi1#MA0029.1;-3;0.00685709;3.26398;0.999747;8;TTTCAGAGAAG;AAGATAAGATAATA;+!DAL80#MA0289.1;-4;0.0145233;6.9131;0.999747;7;TTTCAGAGAAG;CGATAAG;+!GLN3#MA0307.1;-5;0.0153598;7.31127;0.999747;5;TTTCAGAGAAG;GATAA;+!GZF3#MA0309.1;-4;0.0195676;9.31416;0.999747;7;TTTCAGAGAAG;TGATAAGA;+
}}
}}

Latest revision as of 14:13, 7 September 2012

Full Name: CNhs12566_bl_f1

Motif matrix
POACGT
1618.3580478722669306.5717588583499572.8637245329619825.4660333389982
2584.9869588823123352.3213681405027661.4884420904389724.4627954893225
3668.027745769396224.75526826692587672.7583761781359757.7181743881179
4508.77272266675231604.276774760991493.14797997177577117.06208720305813
52098.1267375574764.2218499907990794.221849990799079216.68912706350386
66.4714958888711520.623817444908582296.1642512687990.0
72323.25956460257840.00.00.0
8268.4548076141411520.204886797243741124.0607859522434910.539084238948
91506.7814415860464498.08441853707774315.53541017626292.858294303190282
102047.985594968493416.0811054680614191.04850585852654168.14435830749608
11736.9523619179911121.38192862430151395.87745421201469.04781984827056

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Tal1::Gata1#MA0140.179.77975e-070.0004655160.00093079611TTTCAGAGAAGCTGGTGGGGACAGATAAG+
Gata1#MA0035.2-23.08355e-050.01467770.0146749TTTCAGAGAAGACAGATAAGAA+
GAT1#MA0300.1-30.001569140.746910.4856018TTTCAGAGAAGCCGATAAG+
Trl#MA0205.1-10.002040860.9714470.48560110TTTCAGAGAAGGAGAGAGCAA-
SFL1#MA0377.120.003372691.60540.64199811TTTCAGAGAAGTAGAGAATAGAAGAAATAAAA+
Evi1#MA0029.1-30.006857093.263980.9997478TTTCAGAGAAGAAGATAAGATAATA+
DAL80#MA0289.1-40.01452336.91310.9997477TTTCAGAGAAGCGATAAG+
GLN3#MA0307.1-50.01535987.311270.9997475TTTCAGAGAAGGATAA+
GZF3#MA0309.1-40.01956769.314160.9997477TTTCAGAGAAGTGATAAGA+
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