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MacroAPE 1083:TCSCGAGCTG,motif769: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;23.12;15.895;25.143;224.842!2;33.235;234.957;13.005;7.803!3;28.611;141.899;102.306;15.895!4;0.289;236.98;34.102;17.629!5;0.289;0.289;288.133...")
 
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0.167764!10717-109I6;0.244801!10455-106G5;0.0342197!10534-107G3;0.768102!10429-106D6;0.107937!10464-106H5;0.134974!10827-111C8;0.041219!10789-110H6;0.774226!10828-111C9;0.968393!10788-110H5;0.494935!10792-110H9;0.628647!10765-110E9;0.433377!10829-111D1;0.784795!10830-111D2;0.685921!10831-111D3;0.143134!10832-111D4;0.339188!10833-111D5;0.590374!10764-110E8;0.659832!10770-110F5;0.755406!10399-106A3;0.772313!10400-106A4;0.493147!10405-106A9;0.592177!10834-111D6;0.716581!10835-111D7;0.758466!10836-111D8;0.64112!10837-111D9;0.262985!10699-109G6;0.339909!10802-111A1;0.496159!10796-110I4;0.695421!10010-101C1;0.566502!10810-111A9;0.324365!10421-106C7;0.0440277!10708-109H6;0.366205!12235-129G3;0.171784!12236-129G4;0.000999872!12237-129G5;0.361704!10167-103B5;0.0162342!10151-102I7;0.122763!10428-106D5;0.195455!10795-110I3;0.315578!10805-111A4;0.848545!10052-101G7;0.0105139!10189-103D9;0.589118!10589-108D4;0.839783!10425-106D2;0.026088!10427-106D4;0.110978!10702-109G9;0.609601!10432-106D9;0.0805032!10496-107C1;0.243622!10718-109I7;0.285029!10011-101C2;0.618032!10053-101G8;0.850702!10686-109F2;0.0665779!10084-102B3;0.394606!10012-101C3;0.164597!10085-102B4;0.168352!10482-107A5;0.0325509!10419-106C5;0.0422846!10080-102A8;0.136104!10760-110E4;0.806197!10709-109H7;0.108239!10710-109H8;0.0558938!10703-109H1;0.249244!10719-109I8;0.0143072!10642-109A3;0.0353964!10177-103C6;0.000838386!10164-103B2;0.0554052!10173-103C2;0.174136!10166-103B4;0.0476408!10083-102B2;0.192324!10188-103D8;0.08153!10552-107I3;0.230902!10553-107I4;0.529882!10013-101C4;0.179948!10536-107G5;0.891105!10618-108G6;0.0251511!10423-106C9;0.0540693!10785-110H2;0.155434!12238-129G6;0.210738!12239-129G7;0.00242082!12240-129G8;0.202646!10416-106C2;0.0132812!10801-110I9;0.415208!10766-110F1;0.762773!10824-111C5;0.637031!10825-111C6;0.267425!10826-111C7;0.272314!10454-106G4;0.377507!10409-106B4;0.26538!10638-108I8;0.562182!10636-108I6;0.219547!10513-107D9;0.200708!10420-106C6;0.0553551!10082-102B1;0.013127!10014-101C5;0.942877!10070-101I7;0.671198!10452-106G2;0.952921!10453-106G3;0.154648!10449-106F8;0.281768!10042-101F6;0.260081!10069-101I6;0.134914!10193-103E4;0.581967!10631-108I1;0.0905839!10438-106E6;0.561558!10488-107B2;0.0831902!10196-103E7;0.920329!10071-101I8;0.80088!10071-101I8;0.921948!10041-101F5;0.0509909!10451-106G1;0.943573!10450-106F9;0.0182233!10604-108F1;0.0017679!10605-108F2;0.16239!10606-108F3;0.137708!10603-108E9;0.216609!10497-107C2;0.0987711!10448-106F7;0.958299!10643-109A4;0.676344!10426-106D3;0.397802!10431-106D8;0.317028!10197-103E8;0.0633936!10443-106F2;0.521692!10815-111B5;0.995473!10816-111B6;0.189522!10817-111B7;0.161074!10015-101C6;0.225318!10410-106B5;0.85276!10054-101G9;0.44816!10758-110E2;0.908785!10711-109H9;0.249546!10040-101F4;0.0413346!10470-106I2;0.146659!10415-106C1;0.0560697!10198-103E9;0.741068!10614-108G2;0.554788!10612-108F9;0.602907!10549-107H9;0.649022!10615-108G3;0.0500993!10487-107B1;0.154919!10433-106E1;0.865687!10688-109F4;0.787059!10444-106F3;0.90435!10444-106F3;0.283237!10485-107A8;0.318872!10413-106B8;0.127316!10175-103C4;0.869495!10161-103A8;0.04009!12131-128D7;0.103181!10624-108H3;0.408954!10712-109I1;0.319332!10205-103F7;0.868894!10206-103F8;0.767069!10207-103F9;0.738647!10050-101G5;0.5972!10051-101G6;0.790713!10016-101C7;0.286755!10046-101G1;0.609851!10778-110G4;0.962905!10633-108I3;0.169765!10818-111B8;0.0165131!10819-111B9;0.183363!10820-111C1;0.191002!10484-107A7;0.186183!10808-111A7;0.288682!10169-103B7;0.692176!10153-102I9;0.0948703!13425-144D5;0.161982!13433-144E4;0.00840719!13437-144E8;0.0104921!11904-125F5;0.0145598!11905-125F6;0.102499!10039-101F3;0.325228!10791-110H8;0.184113!10017-101C8;0.35328!10045-101F9;0.384996!10509-107D5;0.896135!10839-111E2;0.99562!10692-109F8;0.684153!10079-102A7;0.123562!10078-102A6;0.452081!10721-110A1;0.352622!10569-108B2;0.739232!10570-108B3;0.216269!10571-108B4;0.0847242!10647-109A8;0.237726!10752-110D5;0.131359!10782-110G8;0.946401!10726-110A6;0.378938!10018-101C9;0.0142604!10086-102B5;0.0292014!10182-103D2;0.215442!10165-103B3;0.0791714!10499-107C4;0.16845!10408-106B3;0.706421!10019-101D1;0.304547!10068-101I5;0.271257!10075-102A3;0.818576!10077-102A5;0.373341!10727-110A7;0.213073!10775-110G1;0.272703!10412-106B7;0.83248!12231-129F8;0.587279!12232-129F9;0.491345!12233-129G1;0.371958!12234-129G2;0.215002!10414-106B9;0.264987!10170-103B8;0.0242689!10183-103D3;0.12474!10150-102I6;0.1326!10174-103C3;0.161783!10155-103A2;0.144325!10038-101F2;0.285319!10838-111E1;0.229023!10759-110E3;0.0361855!10514-107E1;0.0254249!10465-106H6;0.0364297!10691-109F7;0.074887!10843-111E6;0.030476!10844-111E7;0.014122!11747-123G1;0.00836618!11748-123G2;0.0502356!11749-123G3;0.02519!11750-123G4;0.0895363!11751-123G5;0.120565!11840-124H4;0.0395484!11752-123G6;0.00774224!11753-123G7;0.00987548!11754-123G8;0.0400886!11755-123G9;0.283558!11756-123H1;0.902533!11833-124G6;0.411581!11760-123H5;0.0313854!11836-124G9;0.563534!11758-123H3;0.0104747!11835-124G8;0.0209473!11762-123H7;0.00175235!11838-124H2;0.39619!11757-123H2;0.232739!11759-123H4;0.767873!11761-123H6;0.332263!11842-124H6;0.0377231!11837-124H1;0.173615!10568-108B1;0.0979005!13230-141I8;0.572856!13231-141I9;0.11138!10696-109G3;0.144995!10493-107B7;0.495855!10494-107B8;0.84585!10850-111F4;0.489648!10851-111F5;0.389111!10852-111F6;0.766628!10853-111F7;0.679677!10854-111F8;0.57782!10855-111F9;0.271446!10856-111G1;0.919407!10847-111F1;0.617728!10846-111E9;0.0362762!10848-111F2;0.138881!10845-111E8;0.803354!10857-111G2;0.0355707!10858-111G3;0.553368!10156-103A3;0.644097!11901-125F2;0.160572!11902-125F3;0.0337624!11903-125F4;0.0205067!10689-109F5;0.0809273!10648-109A9;0.664692!10784-110H1;0.322898!10744-110C6;0.552144!10772-110F7;0.957809!10474-106I6;0.886997!10600-108E6;0.0718942!10684-109E9;0.311224!12226-129F3;0.676947!12227-129F4;0.693037!10508-107D4;0.75421!10539-107G8;0.0157659!10607-108F4;0.016992!10555-107I6;0.00698969!10774-110F9;0.00141368!10637-108I7;0.117154!10663-109C6;0.00613554!10728-110A8;0.0576249!10729-110A9;0.00495756!10430-106D7;0.242503!10730-110B1;0.405315!10813-111B3;0.0163475!10812-111B2;0.184595!10037-101F1;0.0605063!10172-103C1;0.186021!10163-103B1;0.0852983!10076-102A4;0.154769!10073-102A1;0.120134!10036-101E9;0.0257048!10195-103E6;0.181303!10277-104E7;0.144198!10434-106E2;0.0469629!10550-107I1;0.1506!10545-107H5;0.0204928!10544-107H4;0.280185!10704-109H2;0.216948!10510-107D6;0.127533!10558-107I9;0.0148041!10020-101D2;0.0298383!10732-110B3;0.679361!10049-101G4;0.417583!10698-109G5;0.589823!10437-106E5;0.0623361!10417-106C3;0.151024!10035-101E8;0.532897!10171-103B9;0.160496!10157-103A4;0.0950585!10034-101E7;0.177886!10072-101I9;0.168929!10199-103F1;0.0204866!10200-103F2;0.329401!10697-109G4;0.406925!10723-110A3;0.0216477!10179-103C8;0.180483!10160-103A7;0.486321!10180-103C9;0.561328!10162-103A9;0.563581!10021-101D3;0.554135!10840-111E3;0.391819!10706-109H4;0.874534!10033-101E6;0.720427!10032-101E5;0.110292!10490-107B4;0.176508!10439-106E7;0.253068!10022-101D4;0.182085!10176-103C5;0.985758!10469-106I1;0.142392!10067-101I4;0.265512!10411-106B6;0.277441!10471-106I3;0.146229!10030-101E3;0.228949!10475-106I7;0.621047!10787-110H4;0.0337732!10477-106I9;0.265952!10695-109G2;0.000969827!11771-123I7;0.59743!11772-123I8;0.70145!11773-123I9;0.987984!10093-102C3;0.80048!10442-106F1;0.919271!10442-106F1;0.537274!10201-103F3;0.743935!10639-108I9;0.591195!11843-124H7;0.291946!11841-124H5;0.674401!10693-109F9;0.233066!10436-106E4;0.518249!10483-107A6;0.22427!10282-104F3;0.318274!10023-101D5;0.716182!10066-101I3;0.528287!10065-101I2;0.923652!10800-110I8;0.931283!10610-108F7;0.00396868!10841-111E4;0.120953!10541-107H1;0.0424377!10842-111E5;0.0146104!10562-108A4;0.0385148!10024-101D6;0.011802!10064-101I1;0.505405!10609-108F6;0.73188!10048-101G3;0.0569286!10781-110G7;0.893072!10181-103D1;0.0550293!10159-103A6;0.0821651!10056-101H2;0.11726!10737-110B8;0.241051!10025-101D7;0.24917!10044-101F8;0.154881!10424-106D1;0.538848!10463-106H4;0.785826!10616-108G4;0.879525!10486-107A9;0.716487!10062-101H8;0.823613!10202-103F4;0.61763!10158-103A5;0.633118!10441-106E9;0.135246!10031-101E4;0.00400919!10063-101H9;0.213362!10063-101H9;0.0291795!11763-123H8;0.877692!11765-123I1;0.122236!11768-123I4;0.0859913!10807-111A6;0.0569442!10790-110H7;0.0374113!10798-110I6;0.0371353!10786-110H3;0.115399!10591-108D6;0.113739!10593-108D8;0.00296405!10590-108D5;0.0349102!10026-101D8;0.0416562!10096-102C6;0.803366!10168-103B6;0.401421!10154-103A1;0.0798221!10209-103G2;0.135698!10061-101H7;0.371269!10027-101D9;0.953889!10043-101F7;0.185641!10783-110G9;0.583516!10028-101E1;0.220126!10060-101H6;0.488682!10203-103F5;0.837175!10059-101H5;0.553692!10047-101G2;0.64!10029-101E2;0.495907!10058-101H4;0.335569!10418-106C4;0.78973!10492-107B6;0.00598604!10694-109G1;0.576434!10797-110I5;0.218087!10057-101H3;0.911456!10100-102D1;0.387521!10055-101H1;0.728426!10204-103F6;0.58176!10191-103E2;0.584165!10563-108A5;0.425788
|name=TCSCGAGCTG,motif769,CNhs11332,T:289.0(15.37%),B:4686.6(7.66%),P:1e-28
|name=TCSCGAGCTG,motif769,CNhs11332,T:289.0(15.37%),B:4686.6(7.66%),P:1e-28
|tomtom_result=ARO80#MA0273.1;7;0.00098634;0.469498;0.938996;10;TCCCGAGCTG;ACATACTTGCCGAGAATTATC;-!RDS2#MA0362.1;0;0.00371677;1.76918;0.989076;7;TCCCGAGCTG;CCCCGAG;-!ASH1#MA0276.1;-1;0.00581005;2.76558;0.989076;9;TCCCGAGCTG;CCCGATCCGG;-!YJL103C#MA0427.1;2;0.00610123;2.90418;0.989076;9;TCCCGAGCTG;TCTCCGGAGCT;-!ECM22#MA0292.1;0;0.00666565;3.17285;0.989076;7;TCCCGAGCTG;TCCGGAG;-!CBF1#MA0281.1;0;0.00927802;4.41634;0.989076;8;TCCCGAGCTG;TCACGTGC;-!RSC30#MA0375.1;-1;0.00927802;4.41634;0.989076;8;TCCCGAGCTG;CGCGCGCG;+!SIP4#MA0380.1;0;0.0125939;5.99469;0.989076;7;TCCCGAGCTG;TCCGGAG;-!PUT3#MA0358.1;1;0.0130863;6.22908;0.989076;7;TCCCGAGCTG;TTCCCGGG;-!STB4#MA0391.1;0;0.0139196;6.62575;0.989076;7;TCCCGAGCTG;TTCCGAG;-!GSM1#MA0308.1;5;0.0169541;8.07016;0.989076;10;TCCCGAGCTG;TATACTCCGGAGTTTTTTAAT;-!HAP5#MA0316.1;-1;0.0179514;8.54486;0.989076;9;TCCCGAGCTG;TGGGATCTGATTGGT;+!CEP3#MA0282.1;1;0.018207;8.66652;0.989076;7;TCCCGAGCTG;TTTCCGAG;-!ECM23#MA0293.1;0;0.0183804;8.74906;0.989076;10;TCCCGAGCTG;TTTAGATCTTT;-!RSC3#MA0374.1;-3;0.0195222;9.29258;0.989076;7;TCCCGAGCTG;CGCGCGG;+!XBP1#MA0414.1;0;0.0195222;9.29258;0.989076;7;TCCCGAGCTG;CCTCGAG;-!Deaf1#MA0185.1;-1;0.0201948;9.61273;0.989076;6;TCCCGAGCTG;CACGAA;-
}}
}}

Latest revision as of 14:41, 7 September 2012

Full Name: TCSCGAGCTG,motif769,CNhs11332,T:289.0(15.37%),B:4686.6(7.66%),P:1e-28

Motif matrix
POACGT
123.1215.89525.143224.842
233.235234.95713.0057.803
328.611141.899102.30615.895
40.289236.9834.10217.629
50.2890.289288.1330.289
6261.54521.9640.2895.202
70.28914.739247.96226.01
836.703222.2414.04626.01
90.28972.2534.102182.359
100.28950.575173.68964.447

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ARO80#MA0273.170.000986340.4694980.93899610TCCCGAGCTGACATACTTGCCGAGAATTATC-
RDS2#MA0362.100.003716771.769180.9890767TCCCGAGCTGCCCCGAG-
ASH1#MA0276.1-10.005810052.765580.9890769TCCCGAGCTGCCCGATCCGG-
YJL103C#MA0427.120.006101232.904180.9890769TCCCGAGCTGTCTCCGGAGCT-
ECM22#MA0292.100.006665653.172850.9890767TCCCGAGCTGTCCGGAG-
CBF1#MA0281.100.009278024.416340.9890768TCCCGAGCTGTCACGTGC-
RSC30#MA0375.1-10.009278024.416340.9890768TCCCGAGCTGCGCGCGCG+
SIP4#MA0380.100.01259395.994690.9890767TCCCGAGCTGTCCGGAG-
PUT3#MA0358.110.01308636.229080.9890767TCCCGAGCTGTTCCCGGG-
STB4#MA0391.100.01391966.625750.9890767TCCCGAGCTGTTCCGAG-
GSM1#MA0308.150.01695418.070160.98907610TCCCGAGCTGTATACTCCGGAGTTTTTTAAT-
HAP5#MA0316.1-10.01795148.544860.9890769TCCCGAGCTGTGGGATCTGATTGGT+
CEP3#MA0282.110.0182078.666520.9890767TCCCGAGCTGTTTCCGAG-
ECM23#MA0293.100.01838048.749060.98907610TCCCGAGCTGTTTAGATCTTT-
RSC3#MA0374.1-30.01952229.292580.9890767TCCCGAGCTGCGCGCGG+
XBP1#MA0414.100.01952229.292580.9890767TCCCGAGCTGCCTCGAG-
Deaf1#MA0185.1-10.02019489.612730.9890766TCCCGAGCTGCACGAA-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:TCSCGAGCTG,motif769&oldid=2134448"