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MacroAPE 1083:CNhs10752 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;585.3931894362586;792.1860591356628;50.39607984408262;238.89905326895448!2;375.04336388584574;6.4213395359002945;387.59716486215643;897.8125...")
 
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11A8;0.00826068!10597-108E3;0.0191272!10717-109I6;0.000140467!10455-106G5;0.309298!10534-107G3;0.0235016!10429-106D6;0.00623926!10464-106H5;0.00672951!10827-111C8;0.00772737!10789-110H6;0.128788!10828-111C9;0.104037!10788-110H5;0.559372!10792-110H9;0.00562415!10765-110E9;0.0435615!10829-111D1;0.023784!10830-111D2;0.00389718!10831-111D3;0.0423254!10832-111D4;0.12911!10833-111D5;0.0297918!10764-110E8;0.0111658!10770-110F5;0.0726551!10399-106A3;0.124936!10400-106A4;0.00674448!10405-106A9;0.0047558!10834-111D6;0.00768503!10835-111D7;0.0556698!10836-111D8;0.0172997!10837-111D9;0.00014309!10699-109G6;0.00981179!10802-111A1;0.00888571!10796-110I4;0.00398492!10010-101C1;0.00887343!10810-111A9;0.00245988!10421-106C7;0.000847578!10708-109H6;0.210358!12235-129G3;0.0057409!12236-129G4;0.00839493!12237-129G5;0.515398!10167-103B5;0.0798861!10151-102I7;0.624383!10428-106D5;0.383196!10795-110I3;0.343673!10805-111A4;0.0230031!10052-101G7;0.00500112!10189-103D9;0.00630588!10589-108D4;0.00186603!10425-106D2;9.29485e-05!10427-106D4;0.133205!10702-109G9;0.029364!10432-106D9;0.112722!10496-107C1;0.280999!10718-109I7;0.120183!10011-101C2;0.0354812!10053-101G8;0.0234846!10686-109F2;0.0824949!10084-102B3;0.244927!10012-101C3;0.160149!10085-102B4;0.252976!10482-107A5;0.988214!10419-106C5;0.000207559!10080-102A8;0.00436458!10760-110E4;0.00430985!10709-109H7;0.0172843!10710-109H8;0.206068!10703-109H1;0.186198!10719-109I8;4.20149e-05!10642-109A3;4.88449e-05!10177-103C6;0.00112969!10164-103B2;0.241433!10173-103C2;0.376319!10166-103B4;0.372563!10083-102B2;0.577743!10188-103D8;0.734591!10552-107I3;0.332511!10553-107I4;0.0156927!10013-101C4;0.681059!10536-107G5;0.00552213!10618-108G6;0.209642!10423-106C9;0.00824552!10785-110H2;0.0439988!12238-129G6;0.188226!12239-129G7;0.00023263!12240-129G8;0.043375!10416-106C2;0.00053583!10801-110I9;0.0447073!10766-110F1;0.0902195!10824-111C5;0.024408!10825-111C6;0.00288955!10826-111C7;0.00348391!10454-106G4;0.00611021!10409-106B4;0.00222174!10638-108I8;0.0264684!10636-108I6;0.00474683!10513-107D9;0.151414!10420-106C6;0.000994755!10082-102B1;8.28205e-07!10014-101C5;0.00179682!10070-101I7;0.000859025!10452-106G2;0.00691471!10453-106G3;0.00405539!10449-106F8;0.00137583!10042-101F6;0.00305186!10069-101I6;0.0485348!10193-103E4;0.0173393!10631-108I1;0.21131!10438-106E6;0.00223623!10488-107B2;0.0589714!10196-103E7;0.00764263!10071-101I8;0.137387!10071-101I8;0.00134204!10041-101F5;0.726991!10451-106G1;0.00104799!10450-106F9;7.67463e-05!10604-108F1;1.13676e-05!10605-108F2;0.0464477!10606-108F3;0.053733!10603-108E9;0.0608979!10497-107C2;0.147649!10448-106F7;0.781458!10643-109A4;0.114856!10426-106D3;0.182034!10431-106D8;0.86848!10197-103E8;0.0827362!10443-106F2;0.0082788!10815-111B5;0.89849!10816-111B6;0.0217673!10817-111B7;0.0133161!10015-101C6;0.0155321!10410-106B5;0.00398348!10054-101G9;0.0213415!10758-110E2;0.0202781!10711-109H9;0.00215311!10040-101F4;0.00877529!10470-106I2;0.532939!10415-106C1;0.154738!10198-103E9;0.318013!10614-108G2;0.0016311!10612-108F9;0.351624!10549-107H9;0.01609!10615-108G3;2.21407e-05!10487-107B1;4.77459e-05!10433-106E1;0.028053!10688-109F4;0.709657!10444-106F3;0.643094!10444-106F3;0.777823!10485-107A8;0.989616!10413-106B8;0.00624938!10175-103C4;0.0503495!10161-103A8;0.20487!12131-128D7;0.125061!10624-108H3;0.0352046!10712-109I1;0.650803!10205-103F7;0.0403174!10206-103F8;0.0483751!10207-103F9;0.0550504!10050-101G5;0.0858628!10051-101G6;0.00961372!10016-101C7;0.0334213!10046-101G1;0.0645948!10778-110G4;0.165685!10633-108I3;0.1214!10818-111B8;0.000282376!10819-111B9;0.0113853!10820-111C1;0.0071364!10484-107A7;0.00778892!10808-111A7;0.00246291!10169-103B7;0.0309457!10153-102I9;0.447964!13425-144D5;0.245455!13433-144E4;0.0110563!13437-144E8;0.0071912!11904-125F5;0.0112042!11905-125F6;0.812839!10039-101F3;0.702806!10791-110H8;0.486896!10017-101C8;0.180705!10045-101F9;0.000309285!10509-107D5;0.0195891!10839-111E2;0.0333818!10692-109F8;0.0046158!10079-102A7;0.358977!10078-102A6;0.0357776!10721-110A1;0.0417421!10569-108B2;0.0109323!10570-108B3;0.152515!10571-108B4;0.0858474!10647-109A8;0.226019!10752-110D5;0.0203427!10782-110G8;0.00543205!10726-110A6;0.741754!10018-101C9;0.0965918!10086-102B5;0.01185!10182-103D2;0.00182867!10165-103B3;0.133392!10499-107C4;0.179978!10408-106B3;0.029502!10019-101D1;0.268718!10068-101I5;0.000839354!10075-102A3;0.00860064!10077-102A5;0.000787126!10727-110A7;0.000164237!10775-110G1;0.103209!10412-106B7;0.0213265!12231-129F8;0.287465!12232-129F9;0.0914602!12233-129G1;0.0286942!12234-129G2;0.0197049!10414-106B9;0.450473!10170-103B8;0.00102484!10183-103D3;0.854879!10150-102I6;0.657072!10174-103C3;0.480115!10155-103A2;0.0720523!10038-101F2;0.0817618!10838-111E1;0.0362341!10759-110E3;0.000798263!10514-107E1;0.0505089!10465-106H6;0.000662689!10691-109F7;0.157357!10843-111E6;0.111859!10844-111E7;2.10976e-05!11747-123G1;6.42912e-05!11748-123G2;0.576772!11749-123G3;0.387391!11750-123G4;0.238226!11751-123G5;0.6694!11840-124H4;0.352837!11752-123G6;0.346209!11753-123G7;0.30489!11754-123G8;0.205671!11755-123G9;0.591734!11756-123H1;0.7954!11833-124G6;0.193035!11760-123H5;0.300801!11836-124G9;0.0492834!11758-123H3;0.243654!11835-124G8;0.0624658!11762-123H7;0.0418621!11838-124H2;0.0706573!11757-123H2;0.013774!11759-123H4;0.364896!11761-123H6;0.390712!11842-124H6;0.0405505!11837-124H1;0.158911!10568-108B1;0.0294249!13230-141I8;0.581213!13231-141I9;0.180915!10696-109G3;0.198114!10493-107B7;0.616144!10494-107B8;0.306977!10850-111F4;0.790132!10851-111F5;0.00441032!10852-111F6;0.679614!10853-111F7;0.85865!10854-111F8;0.0621649!10855-111F9;0.0289741!10856-111G1;0.00701678!10847-111F1;0.576377!10846-111E9;0.561267!10848-111F2;0.811584!10845-111E8;0.044824!10857-111G2;0.065787!10858-111G3;0.00383802!10156-103A3;0.279166!11901-125F2;0.458439!11902-125F3;0.591275!11903-125F4;0.705438!10689-109F5;0.343362!10648-109A9;2.05964e-05!10784-110H1;0.0120294!10744-110C6;0.0275618!10772-110F7;0.462813!10474-106I6;0.0111249!10600-108E6;0.142744!10684-109E9;0.00388801!12226-129F3;0.0173648!12227-129F4;0.605113!10508-107D4;0.0373339!10539-107G8;0.000238241!10607-108F4;0.0001725!10555-107I6;1.1298e-05!10774-110F9;0.000652349!10637-108I7;0.000125565!10663-109C6;1.36167e-05!10728-110A8;5.91661e-05!10729-110A9;8.6224e-07!10430-106D7;0.333826!10730-110B1;0.00431476!10813-111B3;2.66576e-05!10812-111B2;0.0363725!10037-101F1;0.0284206!10172-103C1;0.38787!10163-103B1;0.895688!10076-102A4;0.384344!10073-102A1;0.498394!10036-101E9;0.360362!10195-103E6;0.347923!10277-104E7;0.467908!10434-106E2;0.074149!10550-107I1;0.197945!10545-107H5;0.0129205!10544-107H4;0.74429!10704-109H2;0.298842!10510-107D6;0.201524!10558-107I9;2.17267e-05!10020-101D2;0.0498682!10732-110B3;0.0674092!10049-101G4;0.109932!10698-109G5;0.553339!10437-106E5;0.128168!10417-106C3;0.29729!10035-101E8;0.821277!10171-103B9;0.448256!10157-103A4;0.860041!10034-101E7;0.544675!10072-101I9;0.383417!10199-103F1;0.417317!10200-103F2;0.00711837!10697-109G4;0.00470332!10723-110A3;0.000433335!10179-103C8;0.506205!10160-103A7;0.830619!10180-103C9;0.531216!10162-103A9;0.18038!10021-101D3;0.286863!10840-111E3;0.00113493!10706-109H4;0.0312109!10033-101E6;0.157392!10032-101E5;0.229293!10490-107B4;0.389107!10439-106E7;0.00852647!10022-101D4;0.0156359!10176-103C5;0.0153515!10469-106I1;0.582399!10067-101I4;0.022734!10411-106B6;0.0585366!10471-106I3;0.420762!10030-101E3;0.0562759!10475-106I7;0.00808976!10787-110H4;0.000159949!10477-106I9;0.000778208!10695-109G2;0.0104968!11771-123I7;0.221815!11772-123I8;0.884789!11773-123I9;0.754253!10093-102C3;0.597307!10442-106F1;0.0228245!10442-106F1;0.0132417!10201-103F3;0.0126982!10639-108I9;0.0714097!11843-124H7;0.947089!11841-124H5;0.36929!10693-109F9;0.381553!10436-106E4;0.157269!10483-107A6;0.0438141!10282-104F3;0.325358!10023-101D5;0.49043!10066-101I3;0.130064!10065-101I2;0.0256435!10800-110I8;0.00369939!10610-108F7;0.000115618!10841-111E4;0.000468938!10541-107H1;0.00118964!10842-111E5;0.000859447!10562-108A4;0.000196826!10024-101D6;5.22574e-05!10064-101I1;0.000201939!10609-108F6;0.00192577!10048-101G3;0.000106033!10781-110G7;0.281027!10181-103D1;2.2669e-06!10159-103A6;0.0910175!10056-101H2;0.0866646!10737-110B8;0.0837317!10025-101D7;0.492927!10044-101F8;0.00120313!10424-106D1;0.00377641!10463-106H4;0.013224!10616-108G4;0.0583533!10486-107A9;0.696341!10062-101H8;0.0634452!10202-103F4;0.141002!10158-103A5;0.00316581!10441-106E9;0.023539!10031-101E4;6.13511e-06!10063-101H9;0.261559!10063-101H9;0.452542!11763-123H8;0.00361598!11765-123I1;0.0701959!11768-123I4;0.138551!10807-111A6;0.124372!10790-110H7;0.0277325!10798-110I6;0.00273439!10786-110H3;0.0161804!10591-108D6;0.0139332!10593-108D8;0.000216182!10590-108D5;0.00782057!10026-101D8;0.00137873!10096-102C6;0.746549!10168-103B6;0.00397608!10154-103A1;0.290415!10209-103G2;0.131409!10061-101H7;0.0021102!10027-101D9;0.0201148!10043-101F7;0.248296!10783-110G9;0.470714!10028-101E1;0.0358985!10060-101H6;0.199135!10203-103F5;0.13535!10059-101H5;0.00770903!10047-101G2;0.0211913!10029-101E2;2.81304e-05!10058-101H4;0.000691691!10418-106C4;0.0100486!10492-107B6;0.0635422!10694-109G1;0.0370561!10797-110I5;0.665725!10057-101H3;0.289284!10100-102D1;0.00931872!10055-101H1;0.0450099!10204-103F6;0.0368268!10191-103E2;0.110137!10563-108A5;0.000263702
|name=CNhs10752_bl_f1
|name=CNhs10752_bl_f1
|tomtom_result=Klf4#MA0039.2;-2;6.6171e-05;0.0314974;0.0628291;10;CTGCCTCAGCCT;GCCCCACCCA;-!NFE2L2#MA0150.1;0;0.00125777;0.598698;0.438314;11;CTGCCTCAGCCT;ATGACTCAGCA;+!CRZ1#MA0285.1;-4;0.00138489;0.659206;0.438314;8;CTGCCTCAGCCT;CTAAGCCAC;+!Tcfcp2l1#MA0145.1;1;0.00189748;0.903202;0.450413;12;CTGCCTCAGCCT;CCAGTTCAAACCAG;+!Mafb#MA0117.1;-2;0.00408993;1.9468;0.653373;8;CTGCCTCAGCCT;GCGTCAGC;-!Zfx#MA0146.1;1;0.00466662;2.22131;0.653373;12;CTGCCTCAGCCT;GGGGCCGAGGCCTG;+!SP1#MA0079.1;-3;0.00647333;3.0813;0.653373;9;CTGCCTCAGCCT;ACCCCGCCCC;-!CHA4#MA0283.1;-3;0.0081346;3.87207;0.653373;8;CTGCCTCAGCCT;TCTCCGCC;-!Tal1::Gata1#MA0140.1;5;0.00818755;3.89727;0.653373;12;CTGCCTCAGCCT;CTTATCTGTCCCCACCAG;-!AP1#MA0099.2;-1;0.00824112;3.92277;0.653373;7;CTGCCTCAGCCT;TGACTCA;+!Pax4#MA0068.1;12;0.0088335;4.20475;0.653373;12;CTGCCTCAGCCT;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!GCN4#MA0303.1;6;0.00974184;4.63712;0.653373;12;CTGCCTCAGCCT;TGAAGTATGACTCATCCCTTG;-!RUNX1#MA0002.2;0;0.0107521;5.11799;0.653373;11;CTGCCTCAGCCT;AAACCACAGAC;-!AFT2#MA0270.1;-4;0.0115652;5.50505;0.653373;8;CTGCCTCAGCCT;CACACCCC;+!TFAP2A#MA0003.1;-2;0.0119931;5.70872;0.653373;9;CTGCCTCAGCCT;CCCCCGGGC;-!ACE2#MA0267.1;-4;0.0125584;5.97778;0.653373;7;CTGCCTCAGCCT;ACCAGCA;+!BAS1#MA0278.1;5;0.0126398;6.01653;0.653373;12;CTGCCTCAGCCT;TTGACTTGACTCTGGCTGTGC;-
}}
}}

Latest revision as of 12:08, 7 September 2012

Full Name: CNhs10752_bl_f1

Motif matrix
POACGT
1585.3931894362586792.186059135662850.39607984408262238.89905326895448
2375.043363885845746.4213395359002945387.59716486215643897.8125134010564
3157.7411760135641250.741439963890491191.76188797961266.6298777278934
4623.2327447364604896.351303793574135.5691280365814111.7212051183436
516.893625443807131343.1910938953860.5427011354829996306.2469612102836
6338.12555484482044639.9889131808881.7960832730295215686.9638303862213
70.39623296186213121662.71822393209253.75992479100740560.0
81568.64928436224750.00.098.22509732271448
90.983496154646563447.955237924083061076.5987633310488141.33688427518086
1031.6303845041502751358.0207864662727174.49042573009254102.73278498444637
1112.992645800872161454.38304453552063.2982839207022234196.20040742786628
12477.2200640491022290.606577446628625.57019007796253873.4775501112655

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Klf4#MA0039.2-26.6171e-050.03149740.062829110CTGCCTCAGCCTGCCCCACCCA-
NFE2L2#MA0150.100.001257770.5986980.43831411CTGCCTCAGCCTATGACTCAGCA+
CRZ1#MA0285.1-40.001384890.6592060.4383148CTGCCTCAGCCTCTAAGCCAC+
Tcfcp2l1#MA0145.110.001897480.9032020.45041312CTGCCTCAGCCTCCAGTTCAAACCAG+
Mafb#MA0117.1-20.004089931.94680.6533738CTGCCTCAGCCTGCGTCAGC-
Zfx#MA0146.110.004666622.221310.65337312CTGCCTCAGCCTGGGGCCGAGGCCTG+
SP1#MA0079.1-30.006473333.08130.6533739CTGCCTCAGCCTACCCCGCCCC-
CHA4#MA0283.1-30.00813463.872070.6533738CTGCCTCAGCCTTCTCCGCC-
Tal1::Gata1#MA0140.150.008187553.897270.65337312CTGCCTCAGCCTCTTATCTGTCCCCACCAG-
AP1#MA0099.2-10.008241123.922770.6533737CTGCCTCAGCCTTGACTCA+
Pax4#MA0068.1120.00883354.204750.65337312CTGCCTCAGCCTGAAAAATTTCCCATACTCCACTCCCCCCCC+
GCN4#MA0303.160.009741844.637120.65337312CTGCCTCAGCCTTGAAGTATGACTCATCCCTTG-
RUNX1#MA0002.200.01075215.117990.65337311CTGCCTCAGCCTAAACCACAGAC-
AFT2#MA0270.1-40.01156525.505050.6533738CTGCCTCAGCCTCACACCCC+
TFAP2A#MA0003.1-20.01199315.708720.6533739CTGCCTCAGCCTCCCCCGGGC-
ACE2#MA0267.1-40.01255845.977780.6533737CTGCCTCAGCCTACCAGCA+
BAS1#MA0278.150.01263986.016530.65337312CTGCCTCAGCCTTTGACTTGACTCTGGCTGTGC-
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