FFCP PHASE1:Mm9::chr18:35020615..35020641,+: Difference between revisions
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|id=chr18:35020615..35020641,+ | |id=chr18:35020615..35020641,+ | ||
|ontology_enrichment_celltype=CL:0000063!2.73e-12!66;CL:0000066!1.42e-08!25;CL:0000144!2.64e-08!121;CL:0000012!2.64e-08!121;CL:0002371!3.90e-07!118;CL:0002563!5.82e-07!9;CL:0002251!5.82e-07!9 | |ontology_enrichment_celltype=CL:0000063!2.73e-12!66;CL:0000066!1.42e-08!25;CL:0000144!2.64e-08!121;CL:0000012!2.64e-08!121;CL:0002371!3.90e-07!118;CL:0002563!5.82e-07!9;CL:0002251!5.82e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.11e-15,25;CL:0002563,2.66e-14,9;CL:0002251,2.66e-14,9;CL:0000075,5.52e-12,7;CL:0000239,2.13e-10,6;CL:0000677,2.13e-10,6;CL:0000584,2.13e-10,6;CL:0000223,1.60e-09,20;CL:0002076,2.37e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.14e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000485!2.69e-08!11;UBERON:0003350!5.82e-07!9;UBERON:0004808!5.82e-07!9;UBERON:0001277!5.82e-07!9 | |ontology_enrichment_uberon=UBERON:0000485!2.69e-08!11;UBERON:0003350!5.82e-07!9;UBERON:0004808!5.82e-07!9;UBERON:0001277!5.82e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.95e-17,11;UBERON:0003350,2.66e-14,9;UBERON:0004808,2.66e-14,9;UBERON:0001277,2.66e-14,9;UBERON:0001242,3.05e-09,13;UBERON:0001262,3.05e-09,13;UBERON:0004786,3.05e-09,13;UBERON:0000490,1.02e-08,66;UBERON:0000344,9.77e-08,15 | |||
|phase1_expression=6.56610273129655,3.83872948403297,2.72999543633722,13.0059610861937,10.5188103288733,6.71517087647559,4.67225281191051,1.67860320474049,6.47628121897667,7.2560003159818,2.39705155515707,1.11681022593471,1.02720437958723,0.437102012094987,0,0.202475267389826,0,0.473193248037357,0.411343300817216,0.84877930359606,0.17008658030214,0.297872853602656,0,0.159992422793407,0,2.29692785646008,3.87685796543167,1.939241094173,0.190023419456374,0,0.221730510655305,14.6057054895715,10.4561013889377,15.8481681015439,3.46621943701529,2.99222361645286,3.26670970019791,1.67412652294763,3.1253413780952,1.0470474879476,24.7057224973026,22.5405010036287,5.82612423637384,0,0.506884656097573,0,0.782391344348039,0.218025156380447,0,0.777719596297134,0,0,0.503347818173209,0,0.672187598284928,0.771778308107841,0.286533439938757,6.18806510732931,0.202316460859598,0,0.633831403506179,0.677689064138264,0,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,0,0,0,0,0.441737081903227,0.122490799214954,0,0,1.10115880999389,0.383062014255563,0.46081959976873,0,0,0,0.279182999001381,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0.151452386666368,0.151143120213571,39.7114349521299,0,0.679971333707751,0.539703191637817,0,1.34408066129201,0.421333260395256,0.170430322578058,0.259786004602869,0.70667914902068,7.74638808771743,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.37020655662872,3.10725460376606,1.03909497345377,0.173485326766136,0.608930956624282,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.433798070759735,0.884610551949874,0,0,0.484875253135222,0,0,0,0.255457055208591,2.51611761462433,1.19980546198682,1.27070227073065,0.748953197024114,3.66000482254901,0.251308704225729,3.47648640384553,0.511430914660661,0.62336413367868,0.811206315338788,0.611036183101898,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0.459804208866946,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.862271971731369,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0,0.823128545631774,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.420579897128254,0,0,0,0,0.232236671860439,0.128867461322093,0.605050573870028,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0.491764273019036,0,0.160550589987792,0.234423373184406,0.327869890753351,0.504941854408746,0,0,0.861693590931196,0.238968797952552,0,0.849229592366497,0,0.292255857911312,0.395287777946524,2.89189184779626,0.425820255624806,0.178065603667255,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0,1.8267896946876,0,0.42366414172764,1.10264199027481,0.32977250588296,1.77610869365496,0.844380948994182,0.477489376012546,1.31312719796049,0,0.18542530201051,0,0,0,0,0,0,3.90950388985867,6.85762116385924,4.28419918793714,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.821500670520278,0.39061315453185,0,0.241584120826006,0,0.948033361884535,0,0.102710957164827,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.504130925684203,0,0,0.350630706544707,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.183151624267265,0.643105137237198,0,1.6942555278512,0.460325236507177,0.572895513439397,1.54667864109319,1.37016503954128,0,1.35004500046361,2.2516060161211,5.43770890781046,3.10656187051092,0.207574695168353,0,0,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0,0,0,0,0,0,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.429742108096597,0.765153328275374,0,0 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| ||
|short_description=p2@Egr1 | |short_description=p2@Egr1 | ||
}} | }} |
Revision as of 01:20, 15 November 2012
Short description: | p2@Egr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Egr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:680 |
Association with transcript: | -219bp_to_ENSMUST00000064795, ENSMUST00000165033, NM_007913, uc008elt.1_5end |
EntrezGene: | Egr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.11e-15 | 25 |
intestinal epithelial cell | 2.66e-14 | 9 |
epithelial cell of alimentary canal | 2.66e-14 | 9 |
columnar/cuboidal epithelial cell | 5.52e-12 | 7 |
brush border epithelial cell | 2.13e-10 | 6 |
gut absorptive cell | 2.13e-10 | 6 |
enterocyte | 2.13e-10 | 6 |
endodermal cell | 1.60e-09 | 20 |
endo-epithelial cell | 2.37e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 1.95e-17 | 11 |
epithelium of mucosa | 2.66e-14 | 9 |
gastrointestinal system epithelium | 2.66e-14 | 9 |
intestinal epithelium | 2.66e-14 | 9 |
intestinal mucosa | 3.05e-09 | 13 |
wall of intestine | 3.05e-09 | 13 |
gastrointestinal system mucosa | 3.05e-09 | 13 |
unilaminar epithelium | 1.02e-08 | 66 |
mucosa | 9.77e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.14e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.