FFCP PHASE1:Mm9::chr19:57349285..57349290,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr19:57349285..57349290,- | |id=chr19:57349285..57349290,- | ||
|ontology_enrichment_celltype=CL:0000066!4.11e-08!25;CL:0000239!4.41e-07!6;CL:0000677!4.41e-07!6;CL:0000212!4.41e-07!6;CL:0000584!4.41e-07!6 | |ontology_enrichment_celltype=CL:0000066!4.11e-08!25;CL:0000239!4.41e-07!6;CL:0000677!4.41e-07!6;CL:0000212!4.41e-07!6;CL:0000584!4.41e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.82e-20,25;CL:0000182,6.57e-15,5;CL:0000682,6.07e-14,3;CL:0000223,1.16e-13,20;CL:0000239,1.87e-12,6;CL:0000677,1.87e-12,6;CL:0000584,1.87e-12,6;CL:0000075,1.07e-10,7;CL:0002563,2.39e-08,9;CL:0002251,2.39e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.20e-07!66;UBERON:0002113!2.01e-07!14;UBERON:0003918!2.01e-07!14;UBERON:0005095!2.01e-07!14;UBERON:0007687!2.01e-07!14;UBERON:0005172!2.82e-07!49;UBERON:0005173!2.82e-07!49;UBERON:0002417!2.82e-07!49;UBERON:0000916!2.82e-07!49;UBERON:0002107!8.21e-07!22;UBERON:0007499!8.21e-07!22;UBERON:0006925!8.21e-07!22;UBERON:0009497!8.21e-07!22;UBERON:0000015!8.21e-07!22;UBERON:0002423!8.21e-07!22;UBERON:0006235!8.21e-07!22;UBERON:0008835!8.21e-07!22;UBERON:0003894!8.21e-07!22;UBERON:0004161!8.21e-07!22;UBERON:0008836!8.21e-07!22 | |ontology_enrichment_uberon=UBERON:0009569!1.20e-07!66;UBERON:0002113!2.01e-07!14;UBERON:0003918!2.01e-07!14;UBERON:0005095!2.01e-07!14;UBERON:0007687!2.01e-07!14;UBERON:0005172!2.82e-07!49;UBERON:0005173!2.82e-07!49;UBERON:0002417!2.82e-07!49;UBERON:0000916!2.82e-07!49;UBERON:0002107!8.21e-07!22;UBERON:0007499!8.21e-07!22;UBERON:0006925!8.21e-07!22;UBERON:0009497!8.21e-07!22;UBERON:0000015!8.21e-07!22;UBERON:0002423!8.21e-07!22;UBERON:0006235!8.21e-07!22;UBERON:0008835!8.21e-07!22;UBERON:0003894!8.21e-07!22;UBERON:0004161!8.21e-07!22;UBERON:0008836!8.21e-07!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.26e-12,22;UBERON:0007499,2.26e-12,22;UBERON:0006925,2.26e-12,22;UBERON:0009497,2.26e-12,22;UBERON:0000015,2.26e-12,22;UBERON:0002423,2.26e-12,22;UBERON:0006235,2.26e-12,22;UBERON:0008835,2.26e-12,22;UBERON:0003894,2.26e-12,22;UBERON:0004161,2.26e-12,22;UBERON:0008836,2.26e-12,22;UBERON:0009854,8.66e-12,23;UBERON:0009856,8.66e-12,23;UBERON:0002365,9.22e-11,25;UBERON:0002330,9.22e-11,25;UBERON:0003929,4.31e-10,55;UBERON:0005172,2.25e-09,49;UBERON:0005173,2.25e-09,49;UBERON:0002417,2.25e-09,49;UBERON:0000916,2.25e-09,49;UBERON:0003350,2.39e-08,9;UBERON:0004808,2.39e-08,9;UBERON:0001277,2.39e-08,9;UBERON:0000490,4.45e-08,66;UBERON:0005911,1.22e-07,69;UBERON:0003104,3.47e-07,61;UBERON:0009142,3.47e-07,61;UBERON:0000485,7.59e-07,11 | |||
|phase1_expression=0.160148847104794,3.14077866875425,1.81999695755814,2.41971369045464,2.50447864973174,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.319984845586813,0.22940928106717,4.59385571292016,1.7230479846363,1.07735616342945,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3337664802772,6.88339101585109,4.75979933595425,0.539703191637817,1.29955283489534,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.648965052271031,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730999937126662,0.219550115291051,0,0,0.411618449517138,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.316182685621286,1.03327103585722,0.941992367048249,1.35736880313981,2.96452627087149,0.166845105716094,0,0.224862112384854,0,0.482354319504834,0.50925170356284,1.15078454980324,0.162135226775035,0,4.31304619582064,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.655453258862952,0,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.329940245945071,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0,0.412070114477788,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,1.12228454331548,0.118635018124174,0.197008964751127,0,0.154936841185966,0.771626443924566,0,0.233931608445408,0,0,0,0 | |phase1_expression=0.160148847104794,3.14077866875425,1.81999695755814,2.41971369045464,2.50447864973174,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.319984845586813,0.22940928106717,4.59385571292016,1.7230479846363,1.07735616342945,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3337664802772,6.88339101585109,4.75979933595425,0.539703191637817,1.29955283489534,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.648965052271031,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730999937126662,0.219550115291051,0,0,0.411618449517138,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.316182685621286,1.03327103585722,0.941992367048249,1.35736880313981,2.96452627087149,0.166845105716094,0,0.224862112384854,0,0.482354319504834,0.50925170356284,1.15078454980324,0.162135226775035,0,4.31304619582064,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.655453258862952,0,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.329940245945071,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0,0.412070114477788,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0.271608227691724,1.12228454331548,0.118635018124174,0.197008964751127,0,0.154936841185966,0.771626443924566,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr19:57349285..57349290,- | |short_description=p@chr19:57349285..57349290,- | ||
}} | }} |
Revision as of 23:28, 14 November 2012
Short description: | p@chr19:57349285..57349290, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:57349285..57349290, - |
Coexpression cluster: | MCL_coexpression_mm9:259 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.82e-20 | 25 |
hepatocyte | 6.57e-15 | 5 |
M cell of gut | 6.07e-14 | 3 |
endodermal cell | 1.16e-13 | 20 |
brush border epithelial cell | 1.87e-12 | 6 |
gut absorptive cell | 1.87e-12 | 6 |
enterocyte | 1.87e-12 | 6 |
columnar/cuboidal epithelial cell | 1.07e-10 | 7 |
intestinal epithelial cell | 2.39e-08 | 9 |
epithelial cell of alimentary canal | 2.39e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
liver | 2.26e-12 | 22 |
epithelial sac | 2.26e-12 | 22 |
digestive gland | 2.26e-12 | 22 |
epithelium of foregut-midgut junction | 2.26e-12 | 22 |
anatomical boundary | 2.26e-12 | 22 |
hepatobiliary system | 2.26e-12 | 22 |
foregut-midgut junction | 2.26e-12 | 22 |
hepatic diverticulum | 2.26e-12 | 22 |
liver primordium | 2.26e-12 | 22 |
septum transversum | 2.26e-12 | 22 |
liver bud | 2.26e-12 | 22 |
digestive tract diverticulum | 8.66e-12 | 23 |
sac | 8.66e-12 | 23 |
exocrine gland | 9.22e-11 | 25 |
exocrine system | 9.22e-11 | 25 |
gut epithelium | 4.31e-10 | 55 |
abdomen element | 2.25e-09 | 49 |
abdominal segment element | 2.25e-09 | 49 |
abdominal segment of trunk | 2.25e-09 | 49 |
abdomen | 2.25e-09 | 49 |
epithelium of mucosa | 2.39e-08 | 9 |
gastrointestinal system epithelium | 2.39e-08 | 9 |
intestinal epithelium | 2.39e-08 | 9 |
unilaminar epithelium | 4.45e-08 | 66 |
endo-epithelium | 1.22e-07 | 69 |
mesenchyme | 3.47e-07 | 61 |
entire embryonic mesenchyme | 3.47e-07 | 61 |
simple columnar epithelium | 7.59e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.