FFCP PHASE1:Mm9::chr6:115712340..115712362,-: Difference between revisions
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|id=chr6:115712340..115712362,- | |id=chr6:115712340..115712362,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.84e-16!9;UBERON:0000019!1.84e-16!9;UBERON:0000047!1.84e-16!9;UBERON:0004088!1.84e-16!9;UBERON:0002104!1.84e-16!9;UBERON:0001456!1.84e-16!9;UBERON:0003072!1.84e-16!9;UBERON:0003071!1.84e-16!9;UBERON:0004128!1.84e-16!9;UBERON:0000020!2.11e-14!12;UBERON:0001032!2.11e-14!12;UBERON:0004456!2.11e-14!12;UBERON:0005085!4.42e-13!13;UBERON:0001444!4.99e-13!11;UBERON:0004121!2.45e-09!102;UBERON:0000924!2.45e-09!102;UBERON:0006601!2.45e-09!102 | |ontology_enrichment_uberon=UBERON:0000970!1.84e-16!9;UBERON:0000019!1.84e-16!9;UBERON:0000047!1.84e-16!9;UBERON:0004088!1.84e-16!9;UBERON:0002104!1.84e-16!9;UBERON:0001456!1.84e-16!9;UBERON:0003072!1.84e-16!9;UBERON:0003071!1.84e-16!9;UBERON:0004128!1.84e-16!9;UBERON:0000020!2.11e-14!12;UBERON:0001032!2.11e-14!12;UBERON:0004456!2.11e-14!12;UBERON:0005085!4.42e-13!13;UBERON:0001444!4.99e-13!11;UBERON:0004121!2.45e-09!102;UBERON:0000924!2.45e-09!102;UBERON:0006601!2.45e-09!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.86e-71,9;UBERON:0000019,1.86e-71,9;UBERON:0000047,1.86e-71,9;UBERON:0010312,1.86e-71,9;UBERON:0004088,1.86e-71,9;UBERON:0002104,1.86e-71,9;UBERON:0001456,1.86e-71,9;UBERON:0003072,1.86e-71,9;UBERON:0004128,1.86e-71,9;UBERON:0003071,1.86e-71,9;UBERON:0001444,2.02e-58,11;UBERON:0000020,1.57e-53,12;UBERON:0001032,1.57e-53,12;UBERON:0004456,1.57e-53,12;UBERON:0000033,2.17e-49,13;UBERON:0005085,2.17e-49,13;UBERON:0007811,1.48e-17,36;UBERON:0000153,1.32e-14,43;UBERON:0003056,9.62e-13,49;UBERON:0002346,7.00e-12,64;UBERON:0003075,7.00e-12,64;UBERON:0007284,7.00e-12,64;UBERON:0010371,2.52e-10,73;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0010314,4.99e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,1.10434270475807,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0.162241263067758,0,0,0,1.05220927943237,1.56144531555244,4.59804208866946,6.30217454318722,5.57607825992146,5.17077393550092,5.76511741281824,3.74806898238915,5.43277078551933,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0,0.233931608445408,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,1.10434270475807,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0.162241263067758,0,0,0,1.05220927943237,1.56144531555244,4.59804208866946,6.30217454318722,5.57607825992146,5.17077393550092,5.76511741281824,3.74806898238915,5.43277078551933,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0.164140899745061,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0,0.233931608445408,0,0,0.220591419119515,0 | ||
|short_description=p6@Tmem40 | |short_description=p6@Tmem40 | ||
}} | }} |
Revision as of 14:04, 14 November 2012
Short description: | p6@Tmem40 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tmem40_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | 121bp_to_ENSMUST00000166254, ENSMUST00000170625, NM_001168256, NM_001168257, uc012eqn.1, uc012eqo.1_5end |
EntrezGene: | Tmem40 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.86e-71 | 9 |
camera-type eye | 1.86e-71 | 9 |
simple eye | 1.86e-71 | 9 |
immature eye | 1.86e-71 | 9 |
ocular region | 1.86e-71 | 9 |
visual system | 1.86e-71 | 9 |
face | 1.86e-71 | 9 |
optic cup | 1.86e-71 | 9 |
optic vesicle | 1.86e-71 | 9 |
eye primordium | 1.86e-71 | 9 |
subdivision of head | 2.02e-58 | 11 |
sense organ | 1.57e-53 | 12 |
sensory system | 1.57e-53 | 12 |
entire sense organ system | 1.57e-53 | 12 |
head | 2.17e-49 | 13 |
ectodermal placode | 2.17e-49 | 13 |
craniocervical region | 1.48e-17 | 36 |
anterior region of body | 1.32e-14 | 43 |
pre-chordal neural plate | 9.62e-13 | 49 |
neurectoderm | 7.00e-12 | 64 |
neural plate | 7.00e-12 | 64 |
presumptive neural plate | 7.00e-12 | 64 |
ecto-epithelium | 2.52e-10 | 73 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
structure with developmental contribution from neural crest | 4.99e-08 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.