Personal tools

FFCP PHASE1:Mm9::chr3:68809362..68809407,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr3:68809362..68809407,+
|id=chr3:68809362..68809407,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!3.95e-09!23;UBERON:0001009!3.95e-09!23;UBERON:0004872!1.94e-08!33;UBERON:0007100!7.23e-08!18;UBERON:0000948!7.23e-08!18;UBERON:0005498!7.23e-08!18;UBERON:0004140!7.23e-08!18;UBERON:0009881!7.23e-08!18;UBERON:0004141!7.23e-08!18;UBERON:0003084!7.23e-08!18;UBERON:0007005!7.23e-08!18;UBERON:0004139!7.23e-08!18;UBERON:0004291!7.23e-08!18;UBERON:0003081!1.61e-07!88
|ontology_enrichment_uberon=UBERON:0004535!3.95e-09!23;UBERON:0001009!3.95e-09!23;UBERON:0004872!1.94e-08!33;UBERON:0007100!7.23e-08!18;UBERON:0000948!7.23e-08!18;UBERON:0005498!7.23e-08!18;UBERON:0004140!7.23e-08!18;UBERON:0009881!7.23e-08!18;UBERON:0004141!7.23e-08!18;UBERON:0003084!7.23e-08!18;UBERON:0007005!7.23e-08!18;UBERON:0004139!7.23e-08!18;UBERON:0004291!7.23e-08!18;UBERON:0003081!1.61e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.09e-09,23;UBERON:0001009,2.09e-09,23;UBERON:0004872,1.80e-08,33;UBERON:0007100,4.24e-08,18;UBERON:0000948,4.24e-08,18;UBERON:0005498,4.24e-08,18;UBERON:0004140,4.24e-08,18;UBERON:0009881,4.24e-08,18;UBERON:0004141,4.24e-08,18;UBERON:0003084,4.24e-08,18;UBERON:0007005,4.24e-08,18;UBERON:0004139,4.24e-08,18;UBERON:0004291,4.24e-08,18;UBERON:0003081,4.43e-07,87
|phase1_expression=1.92178616525753,0.348975407639361,1.81999695755814,0.30246421130683,1.50268718983904,1.00727563147134,1.40167584357315,15.8821687833139,2.67498572088167,1.87251621057595,0.856089841127525,0.159544317990673,7.19043065711064,4.98296293788285,1.99865857089398,2.83465374345756,1.39912375625629,2.36596624018678,1.37114433605739,0.42438965179803,0.765389611359628,2.58156473122302,4.17919662622297,1.11994695955385,1.83527424853736,0.57423196411502,0.86152399231815,0.215471232685889,0.760093677825496,1.00812051903972,0.886922042621219,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,7.53356935326434,6.2506827561904,9.94695113550217,8.2352408324342,2.73218193983378,4.85510353031154,4.53228544712078,4.46058497365864,3.85448179539531,14.8654355426127,3.70642765846759,3.29529274101708,2.72201858703997,5.03951117851305,0,0.503347818173209,10.1550699881588,7.73015738027667,4.11615097657515,11.4613375975503,2.06268836910977,0.202316460859598,1.05798195854407,0.633831403506179,4.40497891689872,1.77858959222228,1.3498495759221,0.988866362566974,0.7104801149461,2.09720077362883,2.30530983192933,0.311068836925433,0.270011876663381,1.05162480675691,0.285650984403804,0.441737081903227,0.367472397644862,0,0,0,0.127687338085188,0.153606533256243,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,1.17851434189467,1.28134512719193,1.3047961207771,0.075726193333184,1.5870027622425,4.63783181922684,4.30211938490693,0,0,0,0.896053774194671,0.140444420131752,5.62420064507591,4.41636207824877,7.0667914902068,1.12674735821344,23.0987659345772,17.8363667794652,42.6640021891999,0,0.253359865475099,0,1.02765491747154,3.10725460376606,1.63286352971307,1.21439728736295,1.21786191324856,1.38369298353635,1.3565037649736,4.11560474974967,2.01066546127481,2.47194967734374,1.44599356919912,3.5384422077995,2.75003644910596,2.42925670306433,2.42437626567611,1.86391761218122,0.585561594023094,0.209446706813455,0.255457055208591,1.67741174308288,1.19980546198682,1.14363204365758,0.299581278809645,0.457500602818626,0.753926112677186,0.695297280769106,0.255715457330331,0,0.648965052271031,4.07357455401265,2.86136032403214,0,0.631325567659422,1.43132487258974,1.37941262660084,1.62055916824814,1.65775299619287,3.74200745332303,3.45907044769094,3.37326208415024,1.29351685369508,0,0.378212160335639,0.351902248327898,2.19195732427575,1.66828349535359,5.2237824978325,4.11564272815887,1.19420560091096,3.51106593656617,3.08817488537658,1.98914449576915,6.21377317606506,5.39409937956521,3.96136535214233,6.15536312521547,5.90292695242211,3.85667782218446,3.72054311600653,2.95100741539581,7.12268588439734,4.60767579757745,5.91002870684743,4.29664690593035,2.63159977365598,3.07370161407471,4.2946054003319,0,1.74937841044784,0.991256348951394,0.528901133327089,0.639864751605702,1.16118335930219,1.54640953586512,1.81515172161008,2.66853652613844,1.71203063501303,0.474529061544512,0.658795818896044,3.2673577144035,3.18330355265841,1.16978452271472,0.898819408654221,1.51296634912286,0.995706366271836,0.569003702859245,1.82797620175566,3.38123207019241,1.83286195060783,1.55161989734101,5.82127305089644,3.28829993046138,1.18088118383682,1.255989822731,1.97435462274881,0,1.50160595144485,0.982794975566015,0.899448449539415,0.608580364165509,1.68824011826692,2.29163266603278,2.5892652370573,4.21551589615092,1.09824565275233,1.43768206527355,1.11642284300551,2.18426371180192,0.505157755894224,0.538192240565737,0.482443521363367,2.95605104266567,0.947457058852424,2.11854469374634,2.03694102930226,2.81628297946203,5.3602002381381,6.66522194480839,17.3668946593441,10.5615546551148,11.0732344824387,9.24837658213425,2.45794972073607,3.28101465545202,4.77341893318988,0,0.54390568381871,0.983528546038072,1.10374698521893,0,0.468846746368813,1.14754461763673,0.757412781613119,2.2085575359138,0.780877488593277,5.17016154558717,2.86762557543062,2.89638276307112,3.67999490025482,4.04810701674894,2.63030272120181,4.34816555741176,0,2.2710413633323,1.42452482933804,3.90928702448583,1.81467135269789,0,0.242780636154981,2.11626489875326,2.07465587731488,1.18120757152309,3.99665692327106,2.32585463851399,1.09060118843252,3.92147116223193,1.8962205476149,1.05418608574999,0,0.340439605753788,1.44048875225048,0.258717367565509,1.50035924522115,1.41872186913819,1.07021290561242,0.658196082408484,1.522324745573,3.52007562095566,1.0591603543191,0.220528398054962,0.98931751764888,3.55221738730992,1.99032652262914,1.43246812803764,2.62625439592098,0.582961673259701,0.18542530201051,1.70870880797853,1.857481811669,2.77791791054568,3.76736914009382,1.36694227721025,0.915112692826091,1.35982743995084,1.95932033253121,2.3493995546752,1.90934123603023,0.949007980743406,1.21991680276109,1.62008011232702,3.13632444021703,2.40198820120795,4.18079473792944,5.45512807787217,1.30877970992015,0.388844919875379,0.621339313086926,0.56369293868419,1.19613236835183,0.66183396182839,3.11121901350476,0.904118764344118,2.70329800785245,5.28107573905893,1.95306577265925,1.25831213310853,0,0.288030006257865,5.05617793005085,1.82452693761148,0.821687657318618,1.68897069871134,2.8644271306797,0.993406773906324,2.64429988943931,2.51072196196781,2.52416124870369,2.59103142626999,3.12561173924206,3.80085734885034,4.2333210321745,5.02570679380746,0.226730383615211,0,0.62799699626633,0.839423081820392,0.965947970160952,3.56596703357246,2.01466786693992,0.643105137237198,0.501572104035363,0.564751842617067,0.460325236507177,2.29158205375759,0.515559547031063,0.685082519770642,0,0,0,0,0.51776031175182,0.415149390336707,0,0.682934423016537,1.21553358534147,1.04806581313991,1.47074806760011,5.33392146723877,3.29656091582231,1.92551525755089,3.03236654116557,4.05566879824384,4.14977951049368,2.90288673156635,2.88113185821912,3.79074095107048,2.38146845641537,3.24476112645595,2.70072908649187,2.88460130562315,2.64958056241915,1.71434626192708,3.54951612318675,3.33810665926249,3.0522747492789,3.01150017329058,2.96151127620868,4.75612729469209,2.63069711437843,2.58027816307137,3.36685362994643,2.60997039873183,3.34915240076916,1.22769312950907,3.71848418846318,4.05103883060397,0.499621155875892,3.50897412668113,4.08255002691767,4.20834330551455,3.52946270591225,2.31867835620421
|phase1_expression=1.92178616525753,0.348975407639361,1.81999695755814,0.30246421130683,1.50268718983904,1.00727563147134,1.40167584357315,15.8821687833139,2.67498572088167,1.87251621057595,0.856089841127525,0.159544317990673,7.19043065711064,4.98296293788285,1.99865857089398,2.83465374345756,1.39912375625629,2.36596624018678,1.37114433605739,0.42438965179803,0.765389611359628,2.58156473122302,4.17919662622297,1.11994695955385,1.83527424853736,0.57423196411502,0.86152399231815,0.215471232685889,0.760093677825496,1.00812051903972,0.886922042621219,0.635030673459631,0,0,0,0.166234645358492,0.204169356262369,7.53356935326434,6.2506827561904,9.94695113550217,8.2352408324342,2.73218193983378,4.85510353031154,4.53228544712078,4.46058497365864,3.85448179539531,14.8654355426127,3.70642765846759,3.29529274101708,2.72201858703997,5.03951117851305,0,0.503347818173209,10.1550699881588,7.73015738027667,4.11615097657515,11.4613375975503,2.06268836910977,0.202316460859598,1.05798195854407,0.633831403506179,4.40497891689872,1.77858959222228,1.3498495759221,0.988866362566974,0.7104801149461,2.09720077362883,2.30530983192933,0.311068836925433,0.270011876663381,1.05162480675691,0.285650984403804,0.441737081903227,0.367472397644862,0,0,0,0.127687338085188,0.153606533256243,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,1.17851434189467,1.28134512719193,1.3047961207771,0.075726193333184,1.5870027622425,4.63783181922684,4.30211938490693,0,0,0,0.896053774194671,0.140444420131752,5.62420064507591,4.41636207824877,7.0667914902068,1.12674735821344,23.0987659345772,17.8363667794652,42.6640021891999,0,0.253359865475099,0,1.02765491747154,3.10725460376606,1.63286352971307,1.21439728736295,1.21786191324856,1.38369298353635,1.3565037649736,4.11560474974967,2.01066546127481,2.47194967734374,1.44599356919912,3.5384422077995,2.75003644910596,2.42925670306433,2.42437626567611,1.86391761218122,0.585561594023094,0.209446706813455,0.255457055208591,1.67741174308288,1.19980546198682,1.14363204365758,0.299581278809645,0.457500602818626,0.753926112677186,0.695297280769106,0.255715457330331,0,0.648965052271031,4.07357455401265,2.86136032403214,0,0.631325567659422,1.43132487258974,1.37941262660084,1.62055916824814,1.65775299619287,3.74200745332303,3.45907044769094,3.37326208415024,1.29351685369508,0,0.378212160335639,0.351902248327898,2.19195732427575,1.66828349535359,5.2237824978325,4.11564272815887,1.19420560091096,3.51106593656617,3.08817488537658,1.98914449576915,6.21377317606506,5.39409937956521,3.96136535214233,6.15536312521547,5.90292695242211,3.85667782218446,3.72054311600653,2.95100741539581,7.12268588439734,4.60767579757745,5.91002870684743,4.29664690593035,2.63159977365598,3.07370161407471,4.2946054003319,0,1.74937841044784,0.991256348951394,0.528901133327089,0.639864751605702,1.16118335930219,1.54640953586512,1.81515172161008,2.66853652613844,1.71203063501303,0.474529061544512,0.658795818896044,3.2673577144035,3.18330355265841,1.16978452271472,0.898819408654221,1.51296634912286,0.995706366271836,0.569003702859245,1.82797620175566,3.38123207019241,1.83286195060783,1.55161989734101,5.82127305089644,3.28829993046138,1.18088118383682,1.255989822731,1.97435462274881,0,1.50160595144485,0.982794975566015,0.899448449539415,0.608580364165509,1.68824011826692,2.29163266603278,2.5892652370573,4.21551589615092,1.09824565275233,1.43768206527355,1.11642284300551,2.18426371180192,0.505157755894224,0.538192240565737,0.482443521363367,2.95605104266567,0.947457058852424,2.11854469374634,2.03694102930226,2.81628297946203,5.3602002381381,6.66522194480839,17.3668946593441,10.5615546551148,11.0732344824387,9.24837658213425,2.45794972073607,3.28101465545202,4.77341893318988,0,0.54390568381871,0.983528546038072,1.10374698521893,0,0.468846746368813,1.14754461763673,0.757412781613119,2.2085575359138,0.780877488593277,5.17016154558717,2.86762557543062,2.89638276307112,3.67999490025482,4.04810701674894,2.63030272120181,4.34816555741176,0,2.2710413633323,1.42452482933804,3.90928702448583,1.81467135269789,0,0.242780636154981,2.11626489875326,2.07465587731488,1.18120757152309,3.99665692327106,2.32585463851399,1.09060118843252,3.92147116223193,1.8962205476149,1.05418608574999,0,0.340439605753788,1.44048875225048,0.258717367565509,1.50035924522115,1.41872186913819,1.07021290561242,0.658196082408484,1.522324745573,3.52007562095566,1.0591603543191,0.220528398054962,0.98931751764888,3.55221738730992,1.99032652262914,1.43246812803764,2.62625439592098,0.582961673259701,0.18542530201051,1.70870880797853,1.857481811669,2.77791791054568,3.76736914009382,1.36694227721025,0.915112692826091,1.35982743995084,1.95932033253121,2.3493995546752,1.90934123603023,0.949007980743406,1.21991680276109,1.62008011232702,3.13632444021703,2.40198820120795,4.18079473792944,5.45512807787217,1.30877970992015,0.388844919875379,0.621339313086926,0.56369293868419,1.19613236835183,0.66183396182839,3.11121901350476,0.904118764344118,2.70329800785245,5.28107573905893,1.95306577265925,1.25831213310853,0,0.288030006257865,5.05617793005085,1.82452693761148,0.821687657318618,1.68897069871134,2.8644271306797,0.993406773906324,2.64429988943931,2.51072196196781,2.52416124870369,2.59103142626999,3.12561173924206,3.80085734885034,4.2333210321745,5.02570679380746,0.226730383615211,0,0.62799699626633,0.839423081820392,0.965947970160952,3.56596703357246,2.01466786693992,0.643105137237198,0.501572104035363,0.564751842617067,0.460325236507177,2.29158205375759,0.515559547031063,0.685082519770642,0,0,0,0,0.51776031175182,0.415149390336707,0,0.682934423016537,1.21553358534147,1.04806581313991,1.47074806760011,5.33392146723877,3.29656091582231,1.92551525755089,3.03236654116557,4.05566879824384,4.14977951049368,2.90288673156635,2.88113185821912,3.79074095107048,2.38146845641537,3.24476112645595,2.70072908649187,2.88460130562315,2.64958056241915,1.71434626192708,3.54951612318675,3.33810665926249,3.0522747492789,3.01150017329058,2.96151127620868,4.75612729469209,2.63069711437843,2.58027816307137,3.36685362994643,2.60997039873183,3.34915240076916,1.22769312950907,3.71848418846318,4.05103883060397,0.499621155875892,3.50897412668113,4.08255002691767,4.20834330551455,3.52946270591225,2.31867835620421
|short_description=p@chr3:68809362..68809407,+
|short_description=p@chr3:68809362..68809407,+
}}
}}

Revision as of 00:53, 15 November 2012

Short description:p@chr3:68809362..68809407, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:68809362..68809407, +
Coexpression cluster:MCL_coexpression_mm9:52
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr3:68809362..68809407+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.98
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.95
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.46
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.87
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C63.74
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C85.90
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E37.12
heart, neonate N03.CNhs11221.1349-25I24.61
heart, neonate N10.CNhs11118.749-24G15.91
heart, neonate N16.CNhs11209.782-15G14.30
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G75.82
kidney, neonate N10.CNhs11206.758-6D53.29
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A65.36
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C617.37
lung, neonate N06.CNhs11212.683-20E510.56
lung, neonate N07.CNhs11111.715-19A311.07
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A95.46
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B75.28
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E43.13
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G74.23
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:68809362..68809407,%2B&oldid=2352013"