FFCP PHASE1:Mm9::chr5:145901126..145901150,-: Difference between revisions
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|id=chr5:145901126..145901150,- | |id=chr5:145901126..145901150,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.34e-07,3;CL:0000351,2.34e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.35e-07,15;UBERON:0000358,2.34e-07,3;UBERON:0000307,2.34e-07,3;UBERON:0007010,2.34e-07,3;UBERON:0003101,5.03e-07,16;UBERON:0000079,5.03e-07,16 | |||
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| ||
|short_description=p3@Pdap1 | |short_description=p3@Pdap1 | ||
}} | }} | ||
Revision as of 06:20, 15 November 2012
| Short description: | p3@Pdap1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Pdap1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | -19bp_to_ENSMUST00000031627_5end |
| EntrezGene: | Pdap1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic cell | 2.34e-07 | 3 |
| trophoblast cell | 2.34e-07 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| male reproductive organ | 1.35e-07 | 15 |
| blastocyst | 2.34e-07 | 3 |
| blastula | 2.34e-07 | 3 |
| cleaving embryo | 2.34e-07 | 3 |
| male organism | 5.03e-07 | 16 |
| male reproductive system | 5.03e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
