FFCP PHASE1:Mm9::chr8:129118693..129118722,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr8:129118693..129118722,+ | |id=chr8:129118693..129118722,+ | ||
|ontology_enrichment_celltype=CL:0000063!4.32e-14!66;CL:0002320!4.67e-10!46;CL:0000134!4.67e-10!46;CL:0000219!6.34e-09!54;CL:0000144!9.03e-08!121;CL:0000012!9.03e-08!121;CL:0000066!4.88e-07!25 | |ontology_enrichment_celltype=CL:0000063!4.32e-14!66;CL:0002320!4.67e-10!46;CL:0000134!4.67e-10!46;CL:0000219!6.34e-09!54;CL:0000144!9.03e-08!121;CL:0000012!9.03e-08!121;CL:0000066!4.88e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.13e-16,46;CL:0000134,2.13e-16,46;CL:0000219,1.49e-14,54;CL:0000034,1.92e-11,97;CL:0000066,7.08e-11,25;CL:0000223,8.11e-11,20;CL:0000723,2.89e-10,91;CL:0000048,2.89e-10,91;CL:0000988,4.86e-09,32;CL:0002032,4.86e-09,32;CL:0000037,4.86e-09,32;CL:0000837,4.86e-09,32;CL:0002563,3.70e-07,9;CL:0002251,3.70e-07,9;CL:0000738,9.00e-07,17;CL:0002087,9.00e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.67e-10!46 | |ontology_enrichment_uberon=UBERON:0002384!4.67e-10!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.13e-16,46;UBERON:0003350,3.70e-07,9;UBERON:0004808,3.70e-07,9;UBERON:0001277,3.70e-07,9 | |||
|phase1_expression=0.80074423552397,1.39590163055744,1.81999695755814,4.53696316960245,2.50447864973174,0.839396359559449,1.40167584357315,1.16210991097419,0.281577444303333,0.234064526321993,1.02730780935303,0.159544317990673,1.54080656938085,1.39872643870396,0.666219523631325,0.404950534779652,0.699561878128147,0.946386496074713,1.91960207048034,0.42438965179803,0.425216450755349,3.3758923408301,6.79119451761232,0,0.45881856213434,1.14846392823004,1.29228598847722,1.29282739611533,0.190023419456374,1.00812051903972,0.886922042621219,0,1.84519436275371,0,3.46621943701529,3.49092755252834,4.49172583777212,6.27797446105362,3.906676722619,3.66466620781659,17.0587131528994,14.3439551841274,8.25367600152961,0.755380907853464,0.608261587317087,1.10128051297009,1.56478268869608,0.872100625521786,0.439372365468944,0.194429899074283,0,1.43752564364972,7.21465206048266,2.17608642603403,2.35265659399725,0,0.573066879877513,3.09403255366465,0,0.528990979272033,0,3.04960078862219,2.66788438833342,5.39939830368839,3.9554654502679,4.9733608046227,2.99600110518405,3.84218305321555,0.414758449233911,0.270011876663381,0.841299845405528,0,0,0.367472397644862,0.287536413054709,0,0,0.383062014255563,0.307213066512487,0.395658863190582,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0,0,0.37863096666592,0.226714680320357,7.53647670624362,3.44169550792555,2.719885334831,7.55584468292944,3.24888208723835,1.34408066129201,0.140444420131752,0.340860645156116,0.779358013808606,0.35333957451034,0.985903938436763,0,0,0,1.29894624606728,1.01343946190039,4.04419556011827,0.22836775943812,0.258937883647172,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.904335843315735,0.470354828542819,0.251333182659351,0.494389935468748,0.289198713839823,0,0.485300549842228,0,0.484875253135222,0,0.292780797011547,0,0.255457055208591,3.35482348616577,3.59941638596045,3.43089613097275,0.449371918214468,0.457500602818626,0.502617408451458,0,0.255715457330331,0.20778804455956,0.324482526135515,0.305518091550949,0.124406970610093,0.505445516867349,0,0,0.459804208866946,0.360124259610698,0.452114453507145,0.272145996605311,0.2562274405697,0.468508622798644,0.258703370739016,0,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0.823128545631774,1.39323986772945,2.80885274925294,3.08817488537658,4.26245249093389,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0,0.925602677324269,0.697601834251224,0.536546802799238,0.233530684734339,0.658239399653922,0.820837320395476,0.324275238183423,1.46199987425332,0.439100230582101,0.536825675041487,0,0.205809224758569,0.660837565967596,1.05780226665418,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,1.39269530428806,0.779856348476481,2.69645822596266,0,0.398282546508734,1.13800740571849,0.685491075658373,0,0.407302655690628,1.16371492300575,0.49095073923223,0.569128834118316,0.738050739898011,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0.405720242777006,0.241177159752417,1.01850340712568,0.863088412352432,0.810676133875177,0.274561413188081,2.87536413054709,0.372140947668503,0,1.26289438973556,0.538192240565737,0.964887042726734,0.739012760666419,0.757965647081939,0.325929952884052,0.848725428875941,0.469380496577004,1.34005005953453,0.714130922658041,0.390267295715598,0.472905432318573,0.8858587585951,2.07291199254733,1.3109065177259,0.172684981865896,1.44649058581512,0,2.71952841909355,1.47529281905711,0,0.160550589987792,0.117211686592203,0,0.252470927204373,1.89304931649754,1.17131623288992,0.646270193198397,0.238968797952552,0.891194696329576,0.849229592366497,0.809621403349789,0,0.790575555893047,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0.329940245945071,2.65490276679926,1.21390318077491,1.51161778482376,1.50884063804718,1.18120757152309,1.22974059177571,0.775284879504663,1.81766864738753,1.78248689192361,1.26414703174326,1.05418608574999,0,0.340439605753788,0.540183282093931,0.388076051348264,1.07168517515796,0.886701168211368,0.891844088010353,0.822745103010605,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,0.8244312647074,0.161464426695906,0.482503399425247,0.716234064018819,0.656563598980245,0.874442509889552,0,0.854354403989263,0.412773735926445,0.555583582109135,0.565105371014073,0.27338845544205,0.228778173206523,5.43930975980337,4.3384950220334,2.9021994498929,0,0.474503990371703,0.406638934253697,0.540026704109006,0.418176592028937,0.87345025498471,0.539457385539283,0.661227645802687,2.09404753587224,0.777689839750757,0,0,0.598066184175915,0.66183396182839,0.777804753376191,0.645799117388655,0.844780627453891,0.469428954583016,0.651021924219751,0.419437377702843,0,0,0,1.41907650703115,0.308132871494482,0.129920822977795,0.716106782669926,0.198681354781265,0.360586348559907,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0.453460767230423,0.221985953374065,0,0,0.386379188064381,0.187682475451182,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,1.35004500046361,0,0.453142408984205,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0,1.10306105070008,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0,0.749132059759059,0.320125762024346,0.402048282689293,0.952587382566147,0.347652977834566,0,0.412085900803307,0,1.37147700954166,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.507687647350059,0.365855945745545,0.526139422875686,0.543216455383447,0.561142271657738,0.355905054372522,0.29551344712669,0,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,0,0,0.441182838239031,0 | |phase1_expression=0.80074423552397,1.39590163055744,1.81999695755814,4.53696316960245,2.50447864973174,0.839396359559449,1.40167584357315,1.16210991097419,0.281577444303333,0.234064526321993,1.02730780935303,0.159544317990673,1.54080656938085,1.39872643870396,0.666219523631325,0.404950534779652,0.699561878128147,0.946386496074713,1.91960207048034,0.42438965179803,0.425216450755349,3.3758923408301,6.79119451761232,0,0.45881856213434,1.14846392823004,1.29228598847722,1.29282739611533,0.190023419456374,1.00812051903972,0.886922042621219,0,1.84519436275371,0,3.46621943701529,3.49092755252834,4.49172583777212,6.27797446105362,3.906676722619,3.66466620781659,17.0587131528994,14.3439551841274,8.25367600152961,0.755380907853464,0.608261587317087,1.10128051297009,1.56478268869608,0.872100625521786,0.439372365468944,0.194429899074283,0,1.43752564364972,7.21465206048266,2.17608642603403,2.35265659399725,0,0.573066879877513,3.09403255366465,0,0.528990979272033,0,3.04960078862219,2.66788438833342,5.39939830368839,3.9554654502679,4.9733608046227,2.99600110518405,3.84218305321555,0.414758449233911,0.270011876663381,0.841299845405528,0,0,0.367472397644862,0.287536413054709,0,0,0.383062014255563,0.307213066512487,0.395658863190582,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0,0,0.37863096666592,0.226714680320357,7.53647670624362,3.44169550792555,2.719885334831,7.55584468292944,3.24888208723835,1.34408066129201,0.140444420131752,0.340860645156116,0.779358013808606,0.35333957451034,0.985903938436763,0,0,0,1.29894624606728,1.01343946190039,4.04419556011827,0.22836775943812,0.258937883647172,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.904335843315735,0.470354828542819,0.251333182659351,0.494389935468748,0.289198713839823,0,0.485300549842228,0,0.484875253135222,0,0.292780797011547,0,0.255457055208591,3.35482348616577,3.59941638596045,3.43089613097275,0.449371918214468,0.457500602818626,0.502617408451458,0,0.255715457330331,0.20778804455956,0.324482526135515,0.305518091550949,0.124406970610093,0.505445516867349,0,0,0.459804208866946,0.360124259610698,0.452114453507145,0.272145996605311,0.2562274405697,0.468508622798644,0.258703370739016,0,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0.823128545631774,1.39323986772945,2.80885274925294,3.08817488537658,4.26245249093389,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0,0.925602677324269,0.697601834251224,0.536546802799238,0.233530684734339,0.658239399653922,0.820837320395476,0.324275238183423,1.46199987425332,0.439100230582101,0.536825675041487,0,0.205809224758569,0.660837565967596,1.05780226665418,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,1.39269530428806,0.779856348476481,2.69645822596266,0,0.398282546508734,1.13800740571849,0.685491075658373,0,0.407302655690628,1.16371492300575,0.49095073923223,0.569128834118316,0.738050739898011,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0.405720242777006,0.241177159752417,1.01850340712568,0.863088412352432,0.810676133875177,0.274561413188081,2.87536413054709,0.372140947668503,0,1.26289438973556,0.538192240565737,0.964887042726734,0.739012760666419,0.757965647081939,0.325929952884052,0.848725428875941,0.469380496577004,1.34005005953453,0.714130922658041,0.390267295715598,0.472905432318573,0.8858587585951,2.07291199254733,1.3109065177259,0.172684981865896,1.44649058581512,0,2.71952841909355,1.47529281905711,0,0.160550589987792,0.117211686592203,0,0.252470927204373,1.89304931649754,1.17131623288992,0.646270193198397,0.238968797952552,0.891194696329576,0.849229592366497,0.809621403349789,0,0.790575555893047,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0.329940245945071,2.65490276679926,1.21390318077491,1.51161778482376,1.50884063804718,1.18120757152309,1.22974059177571,0.775284879504663,1.81766864738753,1.78248689192361,1.26414703174326,1.05418608574999,0,0.340439605753788,0.540183282093931,0.388076051348264,1.07168517515796,0.886701168211368,0.891844088010353,0.822745103010605,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,0.8244312647074,0.161464426695906,0.482503399425247,0.716234064018819,0.656563598980245,0.874442509889552,0,0.854354403989263,0.412773735926445,0.555583582109135,0.565105371014073,0.27338845544205,0.228778173206523,5.43930975980337,4.3384950220334,2.9021994498929,0,0.474503990371703,0.406638934253697,0.540026704109006,0.418176592028937,0.87345025498471,0.539457385539283,0.661227645802687,2.09404753587224,0.777689839750757,0,0,0.598066184175915,0.66183396182839,0.777804753376191,0.645799117388655,0.844780627453891,0.469428954583016,0.651021924219751,0.419437377702843,0,0,0,1.41907650703115,0.308132871494482,0.129920822977795,0.716106782669926,0.198681354781265,0.360586348559907,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0.453460767230423,0.221985953374065,0,0,0.386379188064381,0.187682475451182,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,1.35004500046361,0,0.453142408984205,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0,1.10306105070008,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0,0.749132059759059,0.320125762024346,0.402048282689293,0.952587382566147,0.347652977834566,0,0.412085900803307,0,1.37147700954166,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.507687647350059,0.365855945745545,0.526139422875686,0.543216455383447,0.561142271657738,0.355905054372522,0.29551344712669,0,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,0,0,0.441182838239031,0 | ||
|short_description=p@chr8:129118693..129118722,+ | |short_description=p@chr8:129118693..129118722,+ | ||
}} | }} |
Revision as of 14:34, 14 November 2012
Short description: | p@chr8:129118693..129118722, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:129118693..129118722, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.13e-16 | 46 |
mesenchymal cell | 2.13e-16 | 46 |
motile cell | 1.49e-14 | 54 |
stem cell | 1.92e-11 | 97 |
epithelial cell | 7.08e-11 | 25 |
endodermal cell | 8.11e-11 | 20 |
somatic stem cell | 2.89e-10 | 91 |
multi fate stem cell | 2.89e-10 | 91 |
hematopoietic cell | 4.86e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.86e-09 | 32 |
hematopoietic stem cell | 4.86e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.86e-09 | 32 |
intestinal epithelial cell | 3.70e-07 | 9 |
epithelial cell of alimentary canal | 3.70e-07 | 9 |
leukocyte | 9.00e-07 | 17 |
nongranular leukocyte | 9.00e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.13e-16 | 46 |
epithelium of mucosa | 3.70e-07 | 9 |
gastrointestinal system epithelium | 3.70e-07 | 9 |
intestinal epithelium | 3.70e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.