FFCP PHASE1:Mm9::chr12:107248414..107248435,+: Difference between revisions
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|id=chr12:107248414..107248435,+ | |id=chr12:107248414..107248435,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.09e-07!32;CL:0002032!1.09e-07!32;CL:0000037!1.09e-07!32;CL:0000566!1.09e-07!32;CL:0000837!1.09e-07!32 | |ontology_enrichment_celltype=CL:0000988!1.09e-07!32;CL:0002032!1.09e-07!32;CL:0000037!1.09e-07!32;CL:0000566!1.09e-07!32;CL:0000837!1.09e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.35e-09,32;CL:0002032,8.35e-09,32;CL:0000037,8.35e-09,32;CL:0000837,8.35e-09,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.41e-07!29;UBERON:0002193!2.49e-07!48;UBERON:0002390!6.27e-07!45;UBERON:0003061!6.27e-07!45 | |ontology_enrichment_uberon=UBERON:0004177!2.41e-07!29;UBERON:0002193!2.49e-07!48;UBERON:0002390!6.27e-07!45;UBERON:0003061!6.27e-07!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.86e-09,48;UBERON:0002405,1.86e-09,48;UBERON:0002390,5.59e-09,45;UBERON:0003061,5.59e-09,45;UBERON:0004177,8.94e-09,29;UBERON:0005057,8.94e-09,29 | |||
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| ||
|short_description=p2@Vrk1 | |short_description=p2@Vrk1 | ||
}} | }} |
Revision as of 04:50, 15 November 2012
Short description: | p2@Vrk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vrk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -37bp_to_ENSMUST00000021539, ENSMUST00000072040, ENSMUST00000085026, NM_001029843, NM_001029844, NM_011705, uc007ozb.1, uc007ozc.1, uc007ozd.1, uc007oze.1_5end |
EntrezGene: | Vrk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.35e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.35e-09 | 32 |
hematopoietic stem cell | 8.35e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.35e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.86e-09 | 48 |
immune system | 1.86e-09 | 48 |
hematopoietic system | 5.59e-09 | 45 |
blood island | 5.59e-09 | 45 |
hemopoietic organ | 8.94e-09 | 29 |
immune organ | 8.94e-09 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.