FFCP PHASE1:Mm9::chr5:93391094..93391119,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr5:93391094..93391119,+ | |id=chr5:93391094..93391119,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.59e-15,3;CL:0002202,5.59e-15,3;CL:0000069,5.59e-15,3;CL:0002632,5.59e-15,3;CL:0002368,5.59e-15,3;CL:0000307,5.59e-15,3;CL:0000377,5.59e-15,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.76e-08!18;UBERON:0000948!7.76e-08!18;UBERON:0005498!7.76e-08!18;UBERON:0004140!7.76e-08!18;UBERON:0009881!7.76e-08!18;UBERON:0004141!7.76e-08!18;UBERON:0003084!7.76e-08!18;UBERON:0007005!7.76e-08!18;UBERON:0004139!7.76e-08!18;UBERON:0004291!7.76e-08!18;UBERON:0004535!7.44e-07!23;UBERON:0001009!7.44e-07!23 | |ontology_enrichment_uberon=UBERON:0007100!7.76e-08!18;UBERON:0000948!7.76e-08!18;UBERON:0005498!7.76e-08!18;UBERON:0004140!7.76e-08!18;UBERON:0009881!7.76e-08!18;UBERON:0004141!7.76e-08!18;UBERON:0003084!7.76e-08!18;UBERON:0007005!7.76e-08!18;UBERON:0004139!7.76e-08!18;UBERON:0004291!7.76e-08!18;UBERON:0004535!7.44e-07!23;UBERON:0001009!7.44e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,5.59e-15,3;UBERON:0001005,5.59e-15,3;UBERON:0007196,5.59e-15,3;UBERON:0001558,5.59e-15,3;UBERON:0003975,8.33e-09,5;UBERON:0000474,2.73e-08,9;UBERON:0000945,6.94e-07,16;UBERON:0010039,6.94e-07,16;UBERON:0003100,8.44e-07,11 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,3.86203585999239,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0,1.28326477414318,0,0,7.79367747640371,8.36087556067825,12.1325866803548,0,0,0,0,0,0.691846491768175,0,0,0,12.6069433544531,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540186184383045,0.23674473558521,0.590292695242212,0.617068451549513,0.697601834251224,2.14618721119695,0.583826711835847,0.16455984991348,1.47750717671186,0.648550476366846,1.02339991197733,1.3173006917463,1.07365135008297,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,2.47455184458803,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0.608929898229199,0.704015124191131,0.42366414172764,0,0.32977250588296,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,2.03319467126849,5.40026704109006,6.89991376847747,3.9305261474312,1.34864346384821,0.661227645802687,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,2.25218970541418,2.74727436400898,8.7891035422417,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,3.86203585999239,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0,1.28326477414318,0,0,7.79367747640371,8.36087556067825,12.1325866803548,0,0,0,0,0,0.691846491768175,0,0,0,12.6069433544531,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540186184383045,0.23674473558521,0.590292695242212,0.617068451549513,0.697601834251224,2.14618721119695,0.583826711835847,0.16455984991348,1.47750717671186,0.648550476366846,1.02339991197733,1.3173006917463,1.07365135008297,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,2.47455184458803,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0.608929898229199,0.704015124191131,0.42366414172764,0,0.32977250588296,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,2.03319467126849,5.40026704109006,6.89991376847747,3.9305261474312,1.34864346384821,0.661227645802687,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,2.25218970541418,2.74727436400898,8.7891035422417,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421 | ||
|short_description=p12@Shroom3 | |short_description=p12@Shroom3 | ||
}} | }} |
Revision as of 12:44, 13 November 2012
Short description: | p12@Shroom3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Shroom3_5end |
Coexpression cluster: | MCL_coexpression_mm9:658 |
Association with transcript: | 29bp_to_ENSMUST00000172752_5end |
EntrezGene: | Shroom3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.59e-15 | 3 |
epithelial cell of tracheobronchial tree | 5.59e-15 | 3 |
branched duct epithelial cell | 5.59e-15 | 3 |
epithelial cell of lower respiratory tract | 5.59e-15 | 3 |
respiratory epithelial cell | 5.59e-15 | 3 |
tracheal epithelial cell | 5.59e-15 | 3 |
tracheoblast | 5.59e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 5.59e-15 | 3 |
respiratory airway | 5.59e-15 | 3 |
tracheobronchial tree | 5.59e-15 | 3 |
lower respiratory tract | 5.59e-15 | 3 |
internal female genitalia | 8.33e-09 | 5 |
female reproductive system | 2.73e-08 | 9 |
stomach | 6.94e-07 | 16 |
food storage organ | 6.94e-07 | 16 |
female organism | 8.44e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.