FFCP PHASE1:Mm9::chr6:52190840..52190853,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15395|HGNC=|MCL_coexpression_id=11|UniProt=P31310|association_with_transcript=0bp_to_ENSMUST00000121043,NM_001122950,uc012ema.1_5end|description=CAGE_peak_5_at_Hoxa10_5end|id=chr6:52190840..52190853,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006554!3.16e-21!16;UBERON:0000489!3.24e-20!21;UBERON:0001008!1.19e-19!17;UBERON:0002113!9.76e-19!14;UBERON:0003918!9.76e-19!14;UBERON:0005095!9.76e-19!14;UBERON:0007687!9.76e-19!14;UBERON:0003103!6.70e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.62e-37,14;UBERON:0003918,2.62e-37,14;UBERON:0011143,2.62e-37,14;UBERON:0005095,2.62e-37,14;UBERON:0007687,2.62e-37,14;UBERON:0006554,1.17e-34,18;UBERON:0001008,9.20e-33,19;UBERON:0000489,1.65e-29,21;UBERON:0003103,1.18e-13,43;UBERON:0005172,1.03e-09,49;UBERON:0005173,1.03e-09,49;UBERON:0002417,1.03e-09,49;UBERON:0000916,1.03e-09,49;UBERON:0003104,3.69e-09,61;UBERON:0009142,3.69e-09,61;UBERON:0009569,7.63e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0.484875253135222,5.59175283654366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,1.07783996466421,1.70195472151037,0.703804496655795,0.657587197282725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.596869416123452,0.779856348476481,0,0.648414149624083,0.597423819763102,7.77638393907635,5.48392860526698,9.01661885384643,5.7022371796688,8.92181440971078,8.20589092716727,12.2046516649817,13.4325234661438,14.9148791449306,11.9695249004147,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.661585194164886,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,3.11075935900303,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,5.40930863290133,1.12609485270709,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p5@Hoxa10}} | ||
|EntrezGene=15395 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=P31310 | |||
|association_with_transcript=0bp_to_ENSMUST00000121043,NM_001122950,uc012ema.1_5end | |||
|description=CAGE_peak_5_at_Hoxa10_5end | |||
|id=chr6:52190840..52190853,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!3.16e-21!16;UBERON:0000489!3.24e-20!21;UBERON:0001008!1.19e-19!17;UBERON:0002113!9.76e-19!14;UBERON:0003918!9.76e-19!14;UBERON:0005095!9.76e-19!14;UBERON:0007687!9.76e-19!14;UBERON:0003103!6.70e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.62e-37,14;UBERON:0003918,2.62e-37,14;UBERON:0011143,2.62e-37,14;UBERON:0005095,2.62e-37,14;UBERON:0007687,2.62e-37,14;UBERON:0006554,1.17e-34,18;UBERON:0001008,9.20e-33,19;UBERON:0000489,1.65e-29,21;UBERON:0003103,1.18e-13,43;UBERON:0005172,1.03e-09,49;UBERON:0005173,1.03e-09,49;UBERON:0002417,1.03e-09,49;UBERON:0000916,1.03e-09,49;UBERON:0003104,3.69e-09,61;UBERON:0009142,3.69e-09,61;UBERON:0009569,7.63e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0.484875253135222,5.59175283654366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,1.07783996466421,1.70195472151037,0.703804496655795,0.657587197282725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.596869416123452,0.779856348476481,0,0.648414149624083,0.597423819763102,7.77638393907635,5.48392860526698,9.01661885384643,5.7022371796688,8.92181440971078,8.20589092716727,12.2046516649817,13.4325234661438,14.9148791449306,11.9695249004147,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.661585194164886,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,3.11075935900303,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,5.40930863290133,1.12609485270709,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.376437521661322,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p5@Hoxa10 | |||
}} |
Revision as of 10:17, 14 September 2013
Short description: | p5@Hoxa10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Hoxa10_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000121043, NM_001122950, uc012ema.1_5end |
EntrezGene: | Hoxa10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 2.62e-37 | 14 |
kidney mesenchyme | 2.62e-37 | 14 |
upper urinary tract | 2.62e-37 | 14 |
kidney rudiment | 2.62e-37 | 14 |
kidney field | 2.62e-37 | 14 |
urinary system structure | 1.17e-34 | 18 |
renal system | 9.20e-33 | 19 |
cavitated compound organ | 1.65e-29 | 21 |
compound organ | 1.18e-13 | 43 |
abdomen element | 1.03e-09 | 49 |
abdominal segment element | 1.03e-09 | 49 |
abdominal segment of trunk | 1.03e-09 | 49 |
abdomen | 1.03e-09 | 49 |
mesenchyme | 3.69e-09 | 61 |
entire embryonic mesenchyme | 3.69e-09 | 61 |
subdivision of trunk | 7.63e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.