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FFCP PHASE1:Mm9::chr6:125046826..125046858,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=107932|HGNC=|UniProt=G5E8V7|association_with_transcript=239bp_to_ENSMUST00000155261_5end|description=CAGE_peak_6_at_Chd4_5end|id=chr6:125046826..125046858,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.48e-07!18;UBERON:0000948!3.48e-07!18;UBERON:0005498!3.48e-07!18;UBERON:0004140!3.48e-07!18;UBERON:0009881!3.48e-07!18;UBERON:0004141!3.48e-07!18;UBERON:0003084!3.48e-07!18;UBERON:0007005!3.48e-07!18;UBERON:0004139!3.48e-07!18;UBERON:0004291!3.48e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.34e-08,18;UBERON:0000948,1.34e-08,18;UBERON:0005498,1.34e-08,18;UBERON:0004140,1.34e-08,18;UBERON:0009881,1.34e-08,18;UBERON:0004141,1.34e-08,18;UBERON:0003084,1.34e-08,18;UBERON:0007005,1.34e-08,18;UBERON:0004139,1.34e-08,18;UBERON:0004291,1.34e-08,18;UBERON:0003103,2.12e-07,43|phase1_expression=2.5623815536767,0,0,0.30246421130683,0,0.33575854382378,0.467225281191051,0.129123323441576,0,0.234064526321993,0,0,0,0.34968160967599,0.333109761815663,0.202475267389826,0,0,0,0,0.510259740906419,0.297872853602656,0,0.159992422793407,0,0.57423196411502,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0.408338712524738,0.837063261473815,0,0.523523743973798,0,0,0,0.377690453926732,0.608261587317087,0.550640256485045,0,0.65407546914134,0.439372365468944,2.13872888981712,1.25987779462826,0,0.167782606057736,0,0,1.54355661621568,1.43266719969378,0.515672092277442,0,0.528990979272033,0,1.0165335962074,0,0.899899717281399,0,0,0.599200221036809,0.768436610643109,0.207379224616955,0,0.210324961351382,0.285650984403804,0.883474163806454,0,0.191690942036473,0,1.10115880999389,1.91531007127782,0.614426133024974,0,0.274462930807229,0,1.3959149950069,0,1.06958773443767,1.76777151284201,0.569486723196412,0.186399445825301,0.757261933331841,1.13357340160178,0.579728977403356,0,0,1.07940638327563,1.94932925234301,0.448026887097336,1.40444420131752,0.681721290312231,2.07828803682295,2.47337702157238,1.83096445709685,0,0,0,0,0,0,1.25602267690966,0.258937883647172,2.3750742250372,0.693941307064543,1.82679286987285,0.691846491768175,0.904335843315735,1.88141931417128,2.89033160058254,1.23597483867187,11.5679485535929,0,1.13236794963186,1.98757366614354,0.484875253135222,1.86391761218122,1.46390398505774,1.04723353406728,0.255457055208591,0.239630249011841,0,0,1.19832511523858,1.37250180845588,0.125654352112864,0.695297280769106,0.767146371990992,1.24672826735736,1.46017136760982,1.52759045775474,1.11966273549084,0.758168275301024,0.210441855886474,0.910843100738926,0.689706313300419,0.900310649026746,0.60281927134286,1.08858398642125,0.640568601424249,0.468508622798644,1.81092359517311,0,0.189106080167819,0,0.876782929710299,0,0.348252166522167,0.205782136407943,1.19420560091096,1.40442637462647,0,0,1.65700618028402,1.40715635988658,2.16074473753218,2.60419209143731,3.34499193970586,2.93107514486019,2.55787339225449,1.3413670069981,1.98501082024188,2.13927804887525,3.447516745661,2.26992666728396,4.67839959761063,4.61055242111206,3.08674763148855,0.630869845692382,0.411618449517138,0,0.528901133327089,0.426576501070468,0.696710015581316,0.257734922644187,1.21010114774006,0.444756087689741,0.570676878337677,0.474529061544512,0,0.754005626400808,0.994782360205754,0.38992817423824,0.898819408654221,0.648414149624083,0.796565093017469,0.569003702859245,1.25673363870702,1.1270773567308,1.62921062276251,2.52138233317913,1.54298803758701,2.40298841072178,3.54264355151045,3.29697328466887,2.96153193412321,0,0.667380422864376,0.393117990226406,0.449724224769707,0.405720242777006,1.20588579876208,1.2731292589071,0.575392274901621,0.324270453550071,0.549122826376163,0,1.11642284300551,0.312037673114561,0.757736633841335,0.538192240565737,1.4473305640901,0.554259570499814,0.189491411770485,0.814824882210129,1.18821560042632,1.17345124144251,0.335012514883631,0.714130922658041,0.780534591431195,1.26108115284953,0.664394068946325,0.956728611944923,1.14704320301017,1.38147985492716,1.01254341007058,0,0,0.491764273019036,0.551873492609465,0.80275294993896,1.64096361229084,0.327869890753351,2.27223834483936,1.26203287766503,1.17131623288992,0.861693590931196,0.955875191810208,0.891194696329576,0.849229592366497,1.21443210502468,1.75353514746787,2.37172666767914,1.60660658210904,1.84522110770749,1.06839362200353,0.977321756121456,1.97964147567043,0,1.45668381692989,1.81394134178851,1.69744571780308,0.885905678642318,1.22974059177571,1.03371317267288,1.45413491791002,0.356497378384721,1.58018378967908,5.27093042874994,2.06271086496374,0.340439605753788,1.26042765821917,0.258717367565509,0.857348140126369,0.709360934569094,0.535106452806212,1.48094118541909,0.913394847343798,0.938686832254841,0.63549621259146,0.220528398054962,0.8244312647074,0.807322133479528,1.20625849856312,0.954978752025092,0.492422699235184,0.874442509889552,1.8542530201051,0.170870880797853,0.619160603889667,0.555583582109135,0.376736914009382,0,0,0.169978429993855,0.419854356970974,0,0,0.316335993581135,0.609958401380546,0.324016022465404,1.04544148007234,0.655087691238533,0,0.826534557253359,0.785267825952089,0.648074866458964,0,0,1.34564891439581,0.66183396182839,0.777804753376191,0.258319646955462,1.18269287843545,1.05621514781179,1.95306577265925,0.838874755405687,0.241584120826006,1.15212002503146,0.316011120628178,0.608175645870493,0,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0,0,0.192423683280659,0.467507608726276,1.36038230169127,0.221985953374065,0.0897138566094757,0.335769232728157,0.579568782096571,1.31377732815827,1.28206136987086,0.214368379079066,0.501572104035363,1.12950368523413,0.460325236507177,0,1.54667864109319,0.685082519770642,0,0,0,1.35942722695261,1.03552062350364,0.93408612825759,0.399024873401031,0.512200817262403,0.729320151204882,1.46729213839588,4.41224420280034,3.55594764482584,4.53277125925567,8.3438994493872,3.79045817645696,3.8021894983536,3.9611531691076,4.775716880964,4.60981097315059,4.59483751644906,3.81034953026459,5.09891034157364,3.27945674788299,5.35711671044299,4.85756436443511,4.4573002810104,4.61437096014278,6.67621331852499,5.37781741539616,4.98779716201252,4.73841804193388,5.12198324043763,4.47218509444333,4.75314398460516,7.2948495315506,3.55905054372522,4.13718825977367,3.6830793885272,4.80304207676495,2.3148793317737,1.24905288968973,4.44470056046276,2.36358159453128,3.44318997723918,1.76473135295612,2.08681052058379|short_description=p6@Chd4}}
|EntrezGene=107932
|HGNC=
|UniProt=G5E8V7
|association_with_transcript=239bp_to_ENSMUST00000155261_5end
|description=CAGE_peak_6_at_Chd4_5end
|id=chr6:125046826..125046858,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!3.48e-07!18;UBERON:0000948!3.48e-07!18;UBERON:0005498!3.48e-07!18;UBERON:0004140!3.48e-07!18;UBERON:0009881!3.48e-07!18;UBERON:0004141!3.48e-07!18;UBERON:0003084!3.48e-07!18;UBERON:0007005!3.48e-07!18;UBERON:0004139!3.48e-07!18;UBERON:0004291!3.48e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.34e-08,18;UBERON:0000948,1.34e-08,18;UBERON:0005498,1.34e-08,18;UBERON:0004140,1.34e-08,18;UBERON:0009881,1.34e-08,18;UBERON:0004141,1.34e-08,18;UBERON:0003084,1.34e-08,18;UBERON:0007005,1.34e-08,18;UBERON:0004139,1.34e-08,18;UBERON:0004291,1.34e-08,18;UBERON:0003103,2.12e-07,43
|phase1_expression=2.5623815536767,0,0,0.30246421130683,0,0.33575854382378,0.467225281191051,0.129123323441576,0,0.234064526321993,0,0,0,0.34968160967599,0.333109761815663,0.202475267389826,0,0,0,0,0.510259740906419,0.297872853602656,0,0.159992422793407,0,0.57423196411502,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0.408338712524738,0.837063261473815,0,0.523523743973798,0,0,0,0.377690453926732,0.608261587317087,0.550640256485045,0,0.65407546914134,0.439372365468944,2.13872888981712,1.25987779462826,0,0.167782606057736,0,0,1.54355661621568,1.43266719969378,0.515672092277442,0,0.528990979272033,0,1.0165335962074,0,0.899899717281399,0,0,0.599200221036809,0.768436610643109,0.207379224616955,0,0.210324961351382,0.285650984403804,0.883474163806454,0,0.191690942036473,0,1.10115880999389,1.91531007127782,0.614426133024974,0,0.274462930807229,0,1.3959149950069,0,1.06958773443767,1.76777151284201,0.569486723196412,0.186399445825301,0.757261933331841,1.13357340160178,0.579728977403356,0,0,1.07940638327563,1.94932925234301,0.448026887097336,1.40444420131752,0.681721290312231,2.07828803682295,2.47337702157238,1.83096445709685,0,0,0,0,0,0,1.25602267690966,0.258937883647172,2.3750742250372,0.693941307064543,1.82679286987285,0.691846491768175,0.904335843315735,1.88141931417128,2.89033160058254,1.23597483867187,11.5679485535929,0,1.13236794963186,1.98757366614354,0.484875253135222,1.86391761218122,1.46390398505774,1.04723353406728,0.255457055208591,0.239630249011841,0,0,1.19832511523858,1.37250180845588,0.125654352112864,0.695297280769106,0.767146371990992,1.24672826735736,1.46017136760982,1.52759045775474,1.11966273549084,0.758168275301024,0.210441855886474,0.910843100738926,0.689706313300419,0.900310649026746,0.60281927134286,1.08858398642125,0.640568601424249,0.468508622798644,1.81092359517311,0,0.189106080167819,0,0.876782929710299,0,0.348252166522167,0.205782136407943,1.19420560091096,1.40442637462647,0,0,1.65700618028402,1.40715635988658,2.16074473753218,2.60419209143731,3.34499193970586,2.93107514486019,2.55787339225449,1.3413670069981,1.98501082024188,2.13927804887525,3.447516745661,2.26992666728396,4.67839959761063,4.61055242111206,3.08674763148855,0.630869845692382,0.411618449517138,0,0.528901133327089,0.426576501070468,0.696710015581316,0.257734922644187,1.21010114774006,0.444756087689741,0.570676878337677,0.474529061544512,0,0.754005626400808,0.994782360205754,0.38992817423824,0.898819408654221,0.648414149624083,0.796565093017469,0.569003702859245,1.25673363870702,1.1270773567308,1.62921062276251,2.52138233317913,1.54298803758701,2.40298841072178,3.54264355151045,3.29697328466887,2.96153193412321,0,0.667380422864376,0.393117990226406,0.449724224769707,0.405720242777006,1.20588579876208,1.2731292589071,0.575392274901621,0.324270453550071,0.549122826376163,0,1.11642284300551,0.312037673114561,0.757736633841335,0.538192240565737,1.4473305640901,0.554259570499814,0.189491411770485,0.814824882210129,1.18821560042632,1.17345124144251,0.335012514883631,0.714130922658041,0.780534591431195,1.26108115284953,0.664394068946325,0.956728611944923,1.14704320301017,1.38147985492716,1.01254341007058,0,0,0.491764273019036,0.551873492609465,0.80275294993896,1.64096361229084,0.327869890753351,2.27223834483936,1.26203287766503,1.17131623288992,0.861693590931196,0.955875191810208,0.891194696329576,0.849229592366497,1.21443210502468,1.75353514746787,2.37172666767914,1.60660658210904,1.84522110770749,1.06839362200353,0.977321756121456,1.97964147567043,0,1.45668381692989,1.81394134178851,1.69744571780308,0.885905678642318,1.22974059177571,1.03371317267288,1.45413491791002,0.356497378384721,1.58018378967908,5.27093042874994,2.06271086496374,0.340439605753788,1.26042765821917,0.258717367565509,0.857348140126369,0.709360934569094,0.535106452806212,1.48094118541909,0.913394847343798,0.938686832254841,0.63549621259146,0.220528398054962,0.8244312647074,0.807322133479528,1.20625849856312,0.954978752025092,0.492422699235184,0.874442509889552,1.8542530201051,0.170870880797853,0.619160603889667,0.555583582109135,0.376736914009382,0,0,0.169978429993855,0.419854356970974,0,0,0.316335993581135,0.609958401380546,0.324016022465404,1.04544148007234,0.655087691238533,0,0.826534557253359,0.785267825952089,0.648074866458964,0,0,1.34564891439581,0.66183396182839,0.777804753376191,0.258319646955462,1.18269287843545,1.05621514781179,1.95306577265925,0.838874755405687,0.241584120826006,1.15212002503146,0.316011120628178,0.608175645870493,0,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0,0,0.192423683280659,0.467507608726276,1.36038230169127,0.221985953374065,0.0897138566094757,0.335769232728157,0.579568782096571,1.31377732815827,1.28206136987086,0.214368379079066,0.501572104035363,1.12950368523413,0.460325236507177,0,1.54667864109319,0.685082519770642,0,0,0,1.35942722695261,1.03552062350364,0.93408612825759,0.399024873401031,0.512200817262403,0.729320151204882,1.46729213839588,4.41224420280034,3.55594764482584,4.53277125925567,8.3438994493872,3.79045817645696,3.8021894983536,3.9611531691076,4.775716880964,4.60981097315059,4.59483751644906,3.81034953026459,5.09891034157364,3.27945674788299,5.35711671044299,4.85756436443511,4.4573002810104,4.61437096014278,6.67621331852499,5.37781741539616,4.98779716201252,4.73841804193388,5.12198324043763,4.47218509444333,4.75314398460516,7.2948495315506,3.55905054372522,4.13718825977367,3.6830793885272,4.80304207676495,2.3148793317737,1.24905288968973,4.44470056046276,2.36358159453128,3.44318997723918,1.76473135295612,2.08681052058379
|short_description=p6@Chd4
}}

Revision as of 08:53, 14 September 2013

Short description:p6@Chd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Chd4_5end
Coexpression cluster:NA
Association with transcript: 239bp_to_ENSMUST00000155261_5end
EntrezGene:Chd4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Chd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H111.57
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I64.68
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primary circulatory organ1.34e-0818
heart1.34e-0818
primitive heart tube1.34e-0818
primary heart field1.34e-0818
anterior lateral plate mesoderm1.34e-0818
heart tube1.34e-0818
heart primordium1.34e-0818
cardiac mesoderm1.34e-0818
cardiogenic plate1.34e-0818
heart rudiment1.34e-0818
compound organ2.12e-0743







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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