FFCP PHASE1:Mm9::chr10:79896129..79896163,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21423|HGNC=|MCL_coexpression_id=1534|UniProt=P15806|association_with_transcript=202bp_to_ENSMUST00000020377,ENSMUST00000105346_5end|description=CAGE_peak_6_at_Tcf3_5end|id=chr10:79896129..79896163,-|ontology_enrichment_celltype=CL:0000221!4.76e-07!44;CL:0000133!4.76e-07!44;CL:0002319!5.72e-07!43|ontology_enrichment_celltype_v019_2=CL:0002319,1.88e-08,43;CL:0000540,3.47e-08,33;CL:0000047,3.47e-08,33;CL:0000031,3.47e-08,33;CL:0000404,3.47e-08,33;CL:0000221,4.54e-08,44;CL:0000133,4.54e-08,44;CL:0000107,1.42e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.42e-07,9|phase1_expression=2.40223270657191,0,0,0,0,0.33575854382378,0.467225281191051,0.129123323441576,0,0,0,0.159544317990673,0.171200729931206,0.0874204024189974,0.333109761815663,0.809901069559304,2.09868563438444,0.946386496074713,0.822686601634433,0.84877930359606,0.0850432901510698,0.893618560807968,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0,0,0,0,0.881277725829041,1.21652317463417,0.917733760808408,2.34717403304412,0.65407546914134,1.09843091367236,0.58328969722285,0.839918529752175,1.43752564364972,0.671130424230945,0,0,0.257259436035947,0.286533439938757,0,2.22548106945558,4.23192783417626,1.26766280701236,1.35537812827653,0,0,0.988866362566974,0,2.99600110518405,2.30530983192933,2.69592992002042,2.70011876663381,2.3135745748652,0.571301968807607,1.10434270475807,2.9397791811589,2.97120960156533,3.67687514644008,0,0,0,1.31886287730194,0.823388792421687,1.56274011167028,0,0.56276261003168,0,0.589257170947335,0.427115042397309,0.559198337475902,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.693941307064543,0.304465478312141,0.461230994512117,0.753613202763113,0.705532242814229,0.125666591329675,0.741584903203122,0,0,1.29413479957927,0.441683036920787,0,0,0.292780797011547,0.41889341362691,0,0.479260498023681,0,0.508280908292259,0.149790639404823,0,2.26177833803156,0,0.255715457330331,0,0.324482526135515,3.05518091550949,0.622034853050465,0,0,3.77349284591841,3.21862946206862,3.06105620669094,1.80845781402858,3.06164246180975,3.07472928683639,1.68663104207512,0.517406741478031,4.52692785158969,6.42960672570586,3.51902248327898,3.06874025398605,1.11218899690239,1.0447564995665,1.02891068203972,2.38841120182192,0.702213187313235,0.257347907114715,0,1.65700618028402,1.87620847984877,0.540186184383045,1.65721314909647,1.57411385397923,1.23413690309903,0,0.268273401399619,1.05088808130453,0.16455984991348,0.656669856316381,0.0810688095458557,0.146199987425332,0,0.268412837520744,0.210289948564127,0.720332286654991,0,0,3.41261200856374,2.78684006232526,0.902072229254653,0.80673409849337,0.444756087689741,0.190225626112559,0,0.658795818896044,0.502670417600539,1.59165177632921,0.19496408711912,0.898819408654221,0.648414149624083,0,4.74169752382704,2.74196430263349,0,0.814605311381257,1.93952487167626,2.17421041659988,0.442655759869801,0,0.156998727841375,0.123397163921801,0.296452627087149,1.66845105716094,2.35870794135844,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,1.43848068725405,2.10775794807546,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0.369506380333209,2.08440552947533,1.79261474086228,1.18821560042632,1.17345124144251,0.502518772325447,1.19021820443007,0.780534591431195,0.788175720530955,0.664394068946325,0.797273843287435,0.163863314715738,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0,0,0.234423373184406,0.819674726883377,0.504941854408746,2.52406575533005,1.95219372148319,1.50796378412959,3.58453196928828,2.22798674082394,2.83076530788832,2.02405350837447,2.63030272120181,1.97643888973262,0,0.99358059645788,3.5613120733451,3.4206261464251,0.824850614862677,0,1.45668381692989,0.906970670894253,0.754420319023592,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0,0.632073515871632,0,0,0,2.88097750450096,5.56242340265844,3.64372959553707,1.77340233642274,0.891844088010353,0.987294123612726,1.2178597964584,0.23467170806371,0,0,0.16488625294148,1.77610869365496,0.603129249281559,0.596861720015682,0.492422699235184,1.45740418314925,0.18542530201051,0.341741761595705,1.03193433981611,0.555583582109135,0.188368457004691,0.683471138605126,0.457556346413045,0,0.419854356970974,1.24379976423981,0,4.11236791655476,1.21991680276109,0.756037385752609,0.627264888043406,0.218362563746178,0,0.41326727862668,0,0.129614973291793,0,1.12738587736838,2.54178128274764,2.15096037594227,1.36115831840833,1.93739735216597,2.02747350588934,1.64300134104056,1.95306577265925,1.67774951081137,0,0.576060012515731,1.89606672376907,0.608175645870493,1.02710957164827,1.29920822977795,1.07416017400489,1.39076948346885,1.9231271923195,0.59075810869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| ||
|EntrezGene=21423 | |||
|HGNC= | |||
|MCL_coexpression_id=1534 | |||
|UniProt=P15806 | |||
|association_with_transcript=202bp_to_ENSMUST00000020377,ENSMUST00000105346_5end | |||
|description=CAGE_peak_6_at_Tcf3_5end | |||
|id=chr10:79896129..79896163,- | |||
|ontology_enrichment_celltype=CL:0000221!4.76e-07!44;CL:0000133!4.76e-07!44;CL:0002319!5.72e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.88e-08,43;CL:0000540,3.47e-08,33;CL:0000047,3.47e-08,33;CL:0000031,3.47e-08,33;CL:0000404,3.47e-08,33;CL:0000221,4.54e-08,44;CL:0000133,4.54e-08,44;CL:0000107,1.42e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.42e-07,9 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0.33575854382378,0.467225281191051,0.129123323441576,0,0,0,0.159544317990673,0.171200729931206,0.0874204024189974,0.333109761815663,0.809901069559304,2.09868563438444,0.946386496074713,0.822686601634433,0.84877930359606,0.0850432901510698,0.893618560807968,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0,0,0,0,0.881277725829041,1.21652317463417,0.917733760808408,2.34717403304412,0.65407546914134,1.09843091367236,0.58328969722285,0.839918529752175,1.43752564364972,0.671130424230945,0,0,0.257259436035947,0.286533439938757,0,2.22548106945558,4.23192783417626,1.26766280701236,1.35537812827653,0,0,0.988866362566974,0,2.99600110518405,2.30530983192933,2.69592992002042,2.70011876663381,2.3135745748652,0.571301968807607,1.10434270475807,2.9397791811589,2.97120960156533,3.67687514644008,0,0,0,1.31886287730194,0.823388792421687,1.56274011167028,0,0.56276261003168,0,0.589257170947335,0.427115042397309,0.559198337475902,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.693941307064543,0.304465478312141,0.461230994512117,0.753613202763113,0.705532242814229,0.125666591329675,0.741584903203122,0,0,1.29413479957927,0.441683036920787,0,0,0.292780797011547,0.41889341362691,0,0.479260498023681,0,0.508280908292259,0.149790639404823,0,2.26177833803156,0,0.255715457330331,0,0.324482526135515,3.05518091550949,0.622034853050465,0,0,3.77349284591841,3.21862946206862,3.06105620669094,1.80845781402858,3.06164246180975,3.07472928683639,1.68663104207512,0.517406741478031,4.52692785158969,6.42960672570586,3.51902248327898,3.06874025398605,1.11218899690239,1.0447564995665,1.02891068203972,2.38841120182192,0.702213187313235,0.257347907114715,0,1.65700618028402,1.87620847984877,0.540186184383045,1.65721314909647,1.57411385397923,1.23413690309903,0,0.268273401399619,1.05088808130453,0.16455984991348,0.656669856316381,0.0810688095458557,0.146199987425332,0,0.268412837520744,0.210289948564127,0.720332286654991,0,0,3.41261200856374,2.78684006232526,0.902072229254653,0.80673409849337,0.444756087689741,0.190225626112559,0,0.658795818896044,0.502670417600539,1.59165177632921,0.19496408711912,0.898819408654221,0.648414149624083,0,4.74169752382704,2.74196430263349,0,0.814605311381257,1.93952487167626,2.17421041659988,0.442655759869801,0,0.156998727841375,0.123397163921801,0.296452627087149,1.66845105716094,2.35870794135844,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,1.43848068725405,2.10775794807546,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0.369506380333209,2.08440552947533,1.79261474086228,1.18821560042632,1.17345124144251,0.502518772325447,1.19021820443007,0.780534591431195,0.788175720530955,0.664394068946325,0.797273843287435,0.163863314715738,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0,0,0.234423373184406,0.819674726883377,0.504941854408746,2.52406575533005,1.95219372148319,1.50796378412959,3.58453196928828,2.22798674082394,2.83076530788832,2.02405350837447,2.63030272120181,1.97643888973262,0,0.99358059645788,3.5613120733451,3.4206261464251,0.824850614862677,0,1.45668381692989,0.906970670894253,0.754420319023592,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0,0.632073515871632,0,0,0,2.88097750450096,5.56242340265844,3.64372959553707,1.77340233642274,0.891844088010353,0.987294123612726,1.2178597964584,0.23467170806371,0,0,0.16488625294148,1.77610869365496,0.603129249281559,0.596861720015682,0.492422699235184,1.45740418314925,0.18542530201051,0.341741761595705,1.03193433981611,0.555583582109135,0.188368457004691,0.683471138605126,0.457556346413045,0,0.419854356970974,1.24379976423981,0,4.11236791655476,1.21991680276109,0.756037385752609,0.627264888043406,0.218362563746178,0,0.41326727862668,0,0.129614973291793,0,1.12738587736838,2.54178128274764,2.15096037594227,1.36115831840833,1.93739735216597,2.02747350588934,1.64300134104056,1.95306577265925,1.67774951081137,0,0.576060012515731,1.89606672376907,0.608175645870493,1.02710957164827,1.29920822977795,1.07416017400489,1.39076948346885,1.9231271923195,0.590758108698309,0.908698049533329,1.5241361331,1.10908803650525,0.974578807397524,0.481059208201647,0.818138315270983,0,0,0.0897138566094757,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,2.90604573235695,2.39414924040619,1.70733605754134,0.729320151204882,1.25767897576789,0.919217542250071,0.222246727801615,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.565879024158229,0.842773567228942,1.02440243847791,1.03383844120104,0.952587382566147,0.115884325944855,1.15745532278223,0.412085900803307,1.47198920134397,0,0.177475806159338,0.476872379894642,0.290692833264657,0.188218760830661,0.338458431566706,0.73171189149109,0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| |||
|short_description=p6@Tcf3 | |||
}} | |||
Revision as of 17:36, 12 September 2013
| Short description: | p6@Tcf3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Tcf3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1534 |
| Association with transcript: | 202bp_to_ENSMUST00000020377, ENSMUST00000105346_5end |
| EntrezGene: | Tcf3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 1.88e-08 | 43 |
| neuron | 3.47e-08 | 33 |
| neuronal stem cell | 3.47e-08 | 33 |
| neuroblast | 3.47e-08 | 33 |
| electrically signaling cell | 3.47e-08 | 33 |
| ectodermal cell | 4.54e-08 | 44 |
| neurectodermal cell | 4.54e-08 | 44 |
| autonomic neuron | 1.42e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| autonomic nervous system | 1.42e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
